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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183738178
PJUD01105261
426418
Alphaproteobacteria
CTG
Gln
>WENV183736922
PJUD01000103
96238
Alphaproteobacteria
GAG
Leu
>WENV183736996
PJUD01000194
29895
Alphaproteobacteria
TGA
Ser
>WENV183736718
PJUD01000004
237800
Alphaproteobacteria
>WENV183736924
PJUD01000103
306070
Alphaproteobacteria
CCA
Trp
>WENV183737461
PJUD01008769
306070
Alphaproteobacteria
CCA
Trp
>WENV183737899
PJUD01046262
306070
Alphaproteobacteria
CCA
Trp
>WENV183737076
PJUD01000354
58865
Alphaproteobacteria
GAG
Leu
>WENV183738229
PJUD01128293
146965
Alphaproteobacteria
CGG
Pro
>WENV183737036
PJUD01000275
193550
Alphaproteobacteria
TCT
Arg
>WENV183736729
PJUD01000005
147152
Alphaproteobacteria
ACG
Arg
>WENV183736990
PJUD01000185
147152
Alphaproteobacteria
ACG
Arg
>WENV183736991
PJUD01000185
147152
Alphaproteobacteria
ACG
Arg
>WENV183738080
PJUD01078005
147152
Alphaproteobacteria
ACG
Arg
>WENV183738081
PJUD01078005
147152
Alphaproteobacteria
ACG
Arg
>WENV183738253
PJUD01137780
144964
Alphaproteobacteria
TGG
Pro
>WENV183736814
PJUD01000039
81064
Alphaproteobacteria
GTA
Tyr
>WENV183736918
PJUD01000100
191197
Alphaproteobacteria
CCG
Arg
>WENV183736883
PJUD01000078
146683
Alphaproteobacteria
GTG
His
>WENV183736891
PJUD01000084
31286
Alphaproteobacteria
GGA
Ser
>WENV183737935
PJUD01053377
148279
Alphaproteobacteria
TCT
Arg
>WENV183738031
PJUD01070673
256971
Alphaproteobacteria
TGT
Thr
>WENV183737037
PJUD01000281
401702
Alphaproteobacteria
>WENV183737026
PJUD01000252
165860
Alphaproteobacteria
TGG
Pro
>WENV183737581
PJUD01016274
185767
Alphaproteobacteria
CCG
Arg
>WENV183736969
PJUD01000138
239035
Alphaproteobacteria
CGC
Ala
>WENV183736726
PJUD01000004
31506
Alphaproteobacteria
TGA
Ser
>WENV183736973
PJUD01000141
236134
Alphaproteobacteria
TAC
Val
>WENV183736882
PJUD01000078
108283
Alphaproteobacteria
CAA
Leu
>WENV183737869
PJUD01042347
239295
Alphaproteobacteria
CAT
Met
>WENV183738198
PJUD01116451
339454
Alphaproteobacteria
>WENV183737401
PJUD01006390
23842
Alphaproteobacteria
CGA
Ser
>WENV183737000
PJUD01000202
339495
Alphaproteobacteria
>WENV183737984
PJUD01061161
22312
Alphaproteobacteria
GCT
Ser
>WENV183736906
PJUD01000093
24459
Alphaproteobacteria
CGA
Ser
>WENV183737992
PJUD01062332
59118
Alphaproteobacteria
CAG
Leu
>WENV183736975
PJUD01000153
97145
Alphaproteobacteria
TAG
Leu
>WENV183737969
PJUD01058305
319095
Alphaproteobacteria
TAC
Val
>WENV183736997
PJUD01000198
173246
Alphaproteobacteria
CCT
Arg
>WENV183737011
PJUD01000214
239037
Alphaproteobacteria
TTT
Lys
>WENV183737856
PJUD01040291
29390
Alphaproteobacteria
CGA
Ser
>WENV183736947
PJUD01000117
294513
Alphaproteobacteria
CGT
Thr
>WENV183736832
PJUD01000050
237281
Alphaproteobacteria
CGT
Thr
>WENV183738086
PJUD01080513
411642
Alphaproteobacteria
GCA
Cys
>WENV183736793
PJUD01000030
10657
Alphaproteobacteria
GCT
Ser
>WENV183738199
PJUD01116462
10657
Alphaproteobacteria
GCT
Ser
>WENV183737168
PJUD01000814
80837
Alphaproteobacteria
TAA
Leu
>WENV183736719
PJUD01000004
338622
Alphaproteobacteria
GTT
Asn
>WENV183737054
PJUD01000309
338622
Alphaproteobacteria
GTT
Asn
>WENV183737055
PJUD01000309
338622
Alphaproteobacteria
GTT
Asn
>WENV183737123
PJUD01000509
338622
Alphaproteobacteria
GTT
Asn
>WENV183737527
PJUD01013119
338622
Alphaproteobacteria
GTT
Asn
>WENV183738340
PJUD01167501
95936
Alphaproteobacteria
TAA
Leu
>WENV183737292
PJUD01003018
187569
Alphaproteobacteria
CCG
Arg
>WENV183736919
PJUD01000102
428521
Alphaproteobacteria
CTG
Gln
>WENV183738182
PJUD01107529
428521
Alphaproteobacteria
CTG
Gln
>WENV183736720
PJUD01000004
101826
Alphaproteobacteria
TAG
Leu
>WENV183737747
PJUD01028127
101826
Alphaproteobacteria
TAG
Leu
>WENV183736834
PJUD01000051
237579
Alphaproteobacteria
CTT
Lys
>WENV183737366
PJUD01004915
237579
Alphaproteobacteria
CTT
Lys
>WENV183737779
PJUD01032824
343498
Alphaproteobacteria
GGT
Thr
>WENV183738421
PJUD01198136
424557
Alphaproteobacteria
CTG
Gln
>WENV183738296
PJUD01152784
426627
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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