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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170554362
CXWK01064081
483989
Betaproteobacteria
>WENV170553439
CXWK01018267
186768
Betaproteobacteria
>WENV170554336
CXWK01062830
400814
Betaproteobacteria
CAC
Val
>WENV170553915
CXWK01037827
88494
Betaproteobacteria
CAG
Leu
>WENV170554217
CXWK01054316
192191
Betaproteobacteria
CAT
Met
>WENV170554726
CXWK01087316
198132
Betaproteobacteria
CAT
Met
>WENV170553849
CXWK01034323
198132
Betaproteobacteria
CAT
Met
>WENV170554300
CXWK01060562
180485
Betaproteobacteria
CAT
Met
>WENV170553821
CXWK01032234
333120
Betaproteobacteria
CCA
Trp
>WENV170554436
CXWK01069504
209542
Betaproteobacteria
CGG
Pro
>WENV170553887
CXWK01036215
135014
Betaproteobacteria
GAG
Leu
>WENV170553528
CXWK01022224
494612
Betaproteobacteria
GCA
Cys
>WENV170553130
CXWK01008755
480973
Betaproteobacteria
GCA
Cys
>WENV170553496
CXWK01020865
480893
Betaproteobacteria
GCA
Cys
>WENV170553393
CXWK01016926
414048
Betaproteobacteria
GGT
Thr
>WENV170554239
CXWK01055469
100103
Betaproteobacteria
GTA
Tyr
>WENV170553333
CXWK01015294
95740
Betaproteobacteria
GTA
Tyr
>WENV170552831
CXWK01002523
307931
Betaproteobacteria
TTC
Glu
>WENV170554213
CXWK01054258
227519
Betaproteobacteria
TTG
Gln
>WENV170553095
CXWK01007461
184269
Betaproteobacteria
TTG
Gln
>WENV170554077
CXWK01045527
195882
Betaproteobacteria
TTG
Gln
>WENV170553510
CXWK01021541
284938
Betaproteobacteria
TTT
Lys
>WENV170554063
CXWK01045275
345422
Betaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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