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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180099668
NMRC01022289
284938
Betaproteobacteria
TTT
Lys
>WENV180099737
NMRC01026235
284821
Betaproteobacteria
TTT
Lys
>WENV180099585
NMRC01019883
293769
Betaproteobacteria
GCC
Gly
>WENV180099526
NMRC01012985
127222
Betaproteobacteria
CAG
Leu
>WENV180099527
NMRC01012985
127222
Betaproteobacteria
CAG
Leu
>WENV180099624
NMRC01021828
203178
Betaproteobacteria
GAT
Ile
>WENV180099554
NMRC01017082
282862
Betaproteobacteria
TGC
Ala
>WENV180099461
NMRC01006348
293930
Betaproteobacteria
CGT
Thr
>WENV180099669
NMRC01022289
284770
Betaproteobacteria
CTT
Lys
>WENV180099477
NMRC01007682
480973
Betaproteobacteria
GCA
Cys
>WENV180099677
NMRC01022488
178217
Betaproteobacteria
TTG
Gln
>WENV180099538
NMRC01015202
282942
Betaproteobacteria
CCG
Arg
>WENV180099679
NMRC01022534
184269
Betaproteobacteria
TTG
Gln
>WENV180099512
NMRC01010447
342564
Betaproteobacteria
CGC
Ala
>WENV180099376
NMRC01000315
328657
Betaproteobacteria
TAC
Val
>WENV180099589
NMRC01020089
118157
Betaproteobacteria
GAG
Leu
>WENV180099465
NMRC01006561
480893
Betaproteobacteria
GCA
Cys
>WENV180099442
NMRC01004697
289755
Betaproteobacteria
TAC
Val
>WENV180099570
NMRC01018267
20603
Betaproteobacteria
GGA
Ser
>WENV180099513
NMRC01010447
282943
Betaproteobacteria
CTT
Lys
>WENV180099418
NMRC01002986
118085
Betaproteobacteria
CAA
Leu
>WENV180099419
NMRC01003001
283018
Betaproteobacteria
TTT
Lys
>WENV180099392
NMRC01001370
178289
Betaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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