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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180105033
OAPD01002096
140963
Alphaproteobacteria
>WENV180105241
OAPD01019295
400214
Alphaproteobacteria
>WENV180104995
OAPD01001087
178510
Alphaproteobacteria
ACG
Arg
>WENV180105001
OAPD01001215
195764
Alphaproteobacteria
ACG
Arg
>WENV180105403
OAPD01046985
411290
Alphaproteobacteria
CAC
Val
>WENV180105139
OAPD01009132
77412
Alphaproteobacteria
CAG
Leu
>WENV180105478
OAPD01070068
178062
Alphaproteobacteria
CAT
Met
>WENV180105392
OAPD01044138
201940
Alphaproteobacteria
CAT
Met
>WENV180105254
OAPD01020645
180029
Alphaproteobacteria
CAT
Met
>WENV180105585
OAPD01105372
178784
Alphaproteobacteria
CAT
Met
>WENV180105034
OAPD01002188
180027
Alphaproteobacteria
CAT
Met
>WENV180105303
OAPD01027560
281650
Alphaproteobacteria
CCA
Trp
>WENV180105379
OAPD01041720
296763
Alphaproteobacteria
CCA
Trp
>WENV180105348
OAPD01036828
178339
Alphaproteobacteria
CCG
Arg
>WENV180105089
OAPD01004855
29652
Alphaproteobacteria
CGA
Ser
>WENV180105753
OAPD01180806
320067
Alphaproteobacteria
CGC
Ala
>WENV180105451
OAPD01060121
320046
Alphaproteobacteria
CGT
Thr
>WENV180105219
OAPD01017007
399480
Alphaproteobacteria
GAA
Phe
>WENV180105140
OAPD01009145
75222
Alphaproteobacteria
GAG
Leu
>WENV180105524
OAPD01084675
78115
Alphaproteobacteria
GAG
Leu
>WENV180105310
OAPD01028537
195438
Alphaproteobacteria
GAT
Ile
>WENV180105211
OAPD01016301
415482
Alphaproteobacteria
GCC
Gly
>WENV180105293
OAPD01026451
400945
Alphaproteobacteria
GCC
Gly
>WENV180105084
OAPD01004276
5795
Alphaproteobacteria
GCT
Ser
>WENV180105126
OAPD01007384
22052
Alphaproteobacteria
GGA
Ser
>WENV180105361
OAPD01039390
197241
Alphaproteobacteria
GGG
Pro
>WENV180105485
OAPD01072572
400387
Alphaproteobacteria
GGT
Thr
>WENV180105120
OAPD01006960
400517
Alphaproteobacteria
GGT
Thr
>WENV180105727
OAPD01172441
178725
Alphaproteobacteria
GTG
His
>WENV180105610
OAPD01117805
184691
Alphaproteobacteria
GTG
His
>WENV180105020
OAPD01001710
178337
Alphaproteobacteria
GTG
His
>WENV180105052
OAPD01002795
398994
Alphaproteobacteria
GTT
Asn
>WENV180105456
OAPD01062271
398994
Alphaproteobacteria
GTT
Asn
>WENV180105183
OAPD01013162
314617
Alphaproteobacteria
TAC
Val
>WENV180104999
OAPD01001199
481268
Alphaproteobacteria
TCC
Gly
>WENV180105372
OAPD01040612
194696
Alphaproteobacteria
TCG
Arg
>WENV180105319
OAPD01030236
180025
Alphaproteobacteria
TCT
Arg
>WENV180105561
OAPD01098812
179386
Alphaproteobacteria
TCT
Arg
>WENV180105021
OAPD01001783
310632
Alphaproteobacteria
TGT
Thr
>WENV180105041
OAPD01002405
400384
Alphaproteobacteria
TTC
Glu
>WENV180105429
OAPD01053221
400386
Alphaproteobacteria
TTG
Gln
>WENV180105093
OAPD01005034
282966
Alphaproteobacteria
TTT
Lys
>WENV180105600
OAPD01112106
283257
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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