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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181167590
OEIU01046882
281518
Betaproteobacteria
CAT
Met
>WENV181167853
OEIU01090233
178213
Betaproteobacteria
TCT
Arg
>WENV181166788
OEIU01002143
285019
Betaproteobacteria
CCT
Arg
>WENV181167177
OEIU01012417
285019
Betaproteobacteria
CCT
Arg
>WENV181168644
OEIU01591274
20638
Betaproteobacteria
GGA
Ser
>WENV181168347
OEIU01291114
176850
Betaproteobacteria
TCT
Arg
>WENV181167823
OEIU01081254
400923
Betaproteobacteria
GTG
His
>WENV181166390
OEIU01000208
406663
Betaproteobacteria
CAC
Val
>WENV181167523
OEIU01039024
293769
Betaproteobacteria
GCC
Gly
>WENV181166647
OEIU01000967
281524
Betaproteobacteria
GAA
Phe
>WENV181168421
OEIU01345085
57723
Betaproteobacteria
TGA
Ser
>WENV181168543
OEIU01468769
293930
Betaproteobacteria
CGT
Thr
>WENV181166467
OEIU01000356
185257
Betaproteobacteria
CAT
Met
>WENV181167742
OEIU01067170
178139
Betaproteobacteria
GGG
Pro
>WENV181166992
OEIU01005798
73401
Betaproteobacteria
TAG
Leu
>WENV181168084
OEIU01155821
73401
Betaproteobacteria
TAG
Leu
>WENV181167504
OEIU01036543
281132
Betaproteobacteria
CGT
Thr
>WENV181166920
OEIU01004159
180176
Betaproteobacteria
CAT
Met
>WENV181167832
OEIU01084258
180176
Betaproteobacteria
CAT
Met
>WENV181166505
OEIU01000443
188039
Betaproteobacteria
TCT
Arg
>WENV181167433
OEIU01028215
480953
Betaproteobacteria
TCC
Gly
>WENV181166820
OEIU01002612
281681
Betaproteobacteria
TTT
Lys
>WENV181166866
OEIU01003608
281681
Betaproteobacteria
TTT
Lys
>WENV181168679
OEIU01641704
283942
Betaproteobacteria
CCA
Trp
>WENV181166397
OEIU01000217
120253
Betaproteobacteria
CAG
Leu
>WENV181166509
OEIU01000462
120253
Betaproteobacteria
CAG
Leu
>WENV181168047
OEIU01139562
180485
Betaproteobacteria
CAT
Met
>WENV181167782
OEIU01074572
178096
Betaproteobacteria
TCT
Arg
>WENV181168848
OEIU01839319
5917
Betaproteobacteria
GCT
Ser
>WENV181166752
OEIU01001619
20603
Betaproteobacteria
GGA
Ser
>WENV181167081
OEIU01007897
20603
Betaproteobacteria
GGA
Ser
>WENV181167655
OEIU01053802
20603
Betaproteobacteria
GGA
Ser
>WENV181167269
OEIU01017032
283018
Betaproteobacteria
TTT
Lys
>WENV181166736
OEIU01001450
480566
Betaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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