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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
109 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182591752
OJIO01003722
180052
Gammaproteobacteria
CCT
Arg
>WENV182591745
OJIO01003290
282684
Gammaproteobacteria
TTC
Glu
>WENV182591692
OJIO01002147
73123
Gammaproteobacteria
CAA
Leu
>WENV182591693
OJIO01002149
73123
Gammaproteobacteria
CAA
Leu
>WENV182591537
OJIO01000331
196766
Gammaproteobacteria
GTT
Asn
>WENV182591461
OJIO01000116
183804
Gammaproteobacteria
CAT
Met
>WENV182591832
OJIO01006474
297858
Gammaproteobacteria
TGC
Ala
>WENV182591398
OJIO01000018
21535
Gammaproteobacteria
GCT
Ser
>WENV182591391
OJIO01000015
178539
Gammaproteobacteria
GAC
Val
>WENV182591787
OJIO01004958
178539
Gammaproteobacteria
GAC
Val
>WENV182591928
OJIO01018840
178164
Gammaproteobacteria
GAT
Ile
>WENV182591951
OJIO01022470
281275
Gammaproteobacteria
TGT
Thr
>WENV182591570
OJIO01000529
282687
Gammaproteobacteria
GCC
Gly
>WENV182591644
OJIO01001179
20273
Gammaproteobacteria
TGA
Ser
>WENV182591443
OJIO01000075
118218
Gammaproteobacteria
TAG
Leu
>WENV182591886
OJIO01011771
328691
Gammaproteobacteria
GGT
Thr
>WENV182591688
OJIO01001993
180053
Gammaproteobacteria
CAT
Met
>WENV182591831
OJIO01006366
178175
Gammaproteobacteria
ACG
Arg
>WENV182591518
OJIO01000272
197233
Gammaproteobacteria
CAT
Met
>WENV182591557
OJIO01000404
197233
Gammaproteobacteria
CAT
Met
>WENV182591456
OJIO01000098
304066
Gammaproteobacteria
TTT
Lys
>WENV182591442
OJIO01000071
178777
Gammaproteobacteria
CCG
Arg
>WENV182591542
OJIO01000338
178538
Gammaproteobacteria
GTC
Asp
>WENV182591390
OJIO01000012
284693
Gammaproteobacteria
TTC
Glu
>WENV182591466
OJIO01000123
73501
Gammaproteobacteria
GAG
Leu
>WENV182591728
OJIO01002964
140925
Gammaproteobacteria
GTA
Tyr
>WENV182591810
OJIO01005738
197551
Gammaproteobacteria
TCT
Arg
>WENV182591384
OJIO01000006
176868
Gammaproteobacteria
CAT
Met
>WENV182591749
OJIO01003608
285584
Gammaproteobacteria
TTT
Lys
>WENV182591662
OJIO01001442
281282
Gammaproteobacteria
TTC
Glu
>WENV182591649
OJIO01001239
281282
Gammaproteobacteria
TTC
Glu
>WENV182591731
OJIO01002982
180717
Gammaproteobacteria
CCA
Trp
>WENV182591624
OJIO01000913
190706
Gammaproteobacteria
ACG
Arg
>WENV182591431
OJIO01000048
190706
Gammaproteobacteria
ACG
Arg
>WENV182592016
OJIO01044819
74240
Gammaproteobacteria
CAA
Leu
>WENV182591472
OJIO01000140
178535
Gammaproteobacteria
CCT
Arg
>WENV182591573
OJIO01000540
178006
Gammaproteobacteria
GGG
Pro
>WENV182591697
OJIO01002229
176663
Gammaproteobacteria
GGG
Pro
>WENV182591621
OJIO01000907
176663
Gammaproteobacteria
GGG
Pro
>WENV182591504
OJIO01000231
20410
Gammaproteobacteria
TGA
Ser
>WENV182591526
OJIO01000286
313852
Gammaproteobacteria
TTC
Glu
>WENV182591548
OJIO01000372
351236
Gammaproteobacteria
TTT
Lys
>WENV182591433
OJIO01000059
351236
Gammaproteobacteria
TTT
Lys
>WENV182591405
OJIO01000024
178540
Gammaproteobacteria
TGG
Pro
>WENV182591708
OJIO01002524
73498
Gammaproteobacteria
CAA
Leu
>WENV182591698
OJIO01002241
480516
Gammaproteobacteria
GCA
Cys
>WENV182591477
OJIO01000159
181513
Gammaproteobacteria
TGG
Pro
>WENV182591422
OJIO01000039
181513
Gammaproteobacteria
TGG
Pro
>WENV182592000
OJIO01037128
57340
Gammaproteobacteria
GGA
Ser
>WENV182591549
OJIO01000379
243308
Gammaproteobacteria
TGG
Pro
>WENV182591473
OJIO01000147
182472
Gammaproteobacteria
GTC
Asp
>WENV182591474
OJIO01000153
182472
Gammaproteobacteria
GTC
Asp
>WENV182591383
OJIO01000004
178541
Gammaproteobacteria
CGG
Pro
>WENV182591381
OJIO01000004
443066
Gammaproteobacteria
GGT
Thr
>WENV182591451
OJIO01000087
508107
Gammaproteobacteria
GCA
Cys
>WENV182591631
OJIO01001029
280812
Gammaproteobacteria
GAA
Phe
>WENV182591739
OJIO01003228
176661
Gammaproteobacteria
GAC
Val
>WENV182591714
OJIO01002672
176661
Gammaproteobacteria
GAC
Val
>WENV182591930
OJIO01018904
281436
Gammaproteobacteria
TGC
Ala
>WENV182592023
OJIO01046162
118204
Gammaproteobacteria
CAA
Leu
>WENV182591677
OJIO01001661
180998
Gammaproteobacteria
GAC
Val
>WENV182591938
OJIO01020317
183701
Gammaproteobacteria
GAT
Ile
>WENV182591839
OJIO01006882
401684
Gammaproteobacteria
CCT
Arg
>WENV182591516
OJIO01000271
178169
Gammaproteobacteria
GAC
Val
>WENV182591742
OJIO01003284
281279
Gammaproteobacteria
TAC
Val
>WENV182591500
OJIO01000219
282922
Gammaproteobacteria
GAA
Phe
>WENV182591750
OJIO01003689
180718
Gammaproteobacteria
CAT
Met
>WENV182591999
OJIO01036853
176664
Gammaproteobacteria
CCT
Arg
>WENV182591490
OJIO01000183
334421
Gammaproteobacteria
TGT
Thr
>WENV182591385
OJIO01000007
346373
Gammaproteobacteria
GAA
Phe
>WENV182591608
OJIO01000742
346373
Gammaproteobacteria
GAA
Phe
>WENV182592004
OJIO01039639
177028
Gammaproteobacteria
CAT
Met
>WENV182591744
OJIO01003290
282683
Gammaproteobacteria
GGC
Ala
>WENV182591740
OJIO01003239
176544
Gammaproteobacteria
CAT
Met
>WENV182591691
OJIO01002075
362004
Gammaproteobacteria
TGT
Thr
>WENV182591882
OJIO01011373
180680
Gammaproteobacteria
GAC
Val
>WENV182591575
OJIO01000596
176301
Gammaproteobacteria
GAT
Ile
>WENV182591492
OJIO01000187
89769
Gammaproteobacteria
CAG
Leu
>WENV182591489
OJIO01000177
371341
Gammaproteobacteria
GTT
Asn
>WENV182591519
OJIO01000272
371341
Gammaproteobacteria
GTT
Asn
>WENV182591924
OJIO01018591
371341
Gammaproteobacteria
GTT
Asn
>WENV182591683
OJIO01001833
56623
Gammaproteobacteria
GGA
Ser
>WENV182591558
OJIO01000417
56623
Gammaproteobacteria
GGA
Ser
>WENV182591544
OJIO01000355
56623
Gammaproteobacteria
GGA
Ser
>WENV182591525
OJIO01000285
56623
Gammaproteobacteria
GGA
Ser
>WENV182591783
OJIO01004822
176665
Gammaproteobacteria
CGG
Pro
>WENV182591409
OJIO01000030
402799
Gammaproteobacteria
TTG
Gln
>WENV182591960
OJIO01025369
281434
Gammaproteobacteria
GTT
Asn
>WENV182591988
OJIO01032428
13469
Gammaproteobacteria
GCT
Ser
>WENV182592024
OJIO01046163
8605
Gammaproteobacteria
>WENV182591770
OJIO01004352
285547
Gammaproteobacteria
TTG
Gln
>WENV182591741
OJIO01003239
285547
Gammaproteobacteria
TTG
Gln
>WENV182591412
OJIO01000030
285547
Gammaproteobacteria
TTG
Gln
>WENV182591494
OJIO01000193
185695
Gammaproteobacteria
CAT
Met
>WENV182591716
OJIO01002693
180681
Gammaproteobacteria
TGG
Pro
>WENV182591781
OJIO01004743
285955
Gammaproteobacteria
GTT
Asn
>WENV182591620
OJIO01000865
178009
Gammaproteobacteria
TGG
Pro
>WENV182591901
OJIO01013798
23169
Gammaproteobacteria
GGA
Ser
>WENV182591753
OJIO01003728
14091
Gammaproteobacteria
TGA
Ser
>WENV182591539
OJIO01000333
218791
Gammaproteobacteria
ACG
Arg
>WENV182591634
OJIO01001053
56412
Gammaproteobacteria
GGA
Ser
>WENV182591944
OJIO01020794
281283
Gammaproteobacteria
GTG
His
>WENV182591867
OJIO01009349
285954
Gammaproteobacteria
GAA
Phe
>WENV182591521
OJIO01000277
141076
Gammaproteobacteria
GTA
Tyr
>WENV182591957
OJIO01025006
480549
Gammaproteobacteria
TCC
Gly
>WENV182591410
OJIO01000030
190582
Gammaproteobacteria
CAT
Met
>WENV182591849
OJIO01007561
282893
Gammaproteobacteria
TAC
Val
>WENV182591444
OJIO01000075
184457
Gammaproteobacteria
GGG
Pro
>WENV182591868
OJIO01009486
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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