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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183059703
OLHV01000439
196766
Gammaproteobacteria
GTT
Asn
>WENV183059778
OLHV01003708
183804
Gammaproteobacteria
CAT
Met
>WENV183059802
OLHV01005572
21535
Gammaproteobacteria
GCT
Ser
>WENV183059830
OLHV01010227
180719
Gammaproteobacteria
ACG
Arg
>WENV183059818
OLHV01008434
282687
Gammaproteobacteria
GCC
Gly
>WENV183059788
OLHV01004462
314350
Gammaproteobacteria
CCA
Trp
>WENV183059622
OLHV01000081
330614
Gammaproteobacteria
TTT
Lys
>WENV183059585
OLHV01000028
330614
Gammaproteobacteria
TTT
Lys
>WENV183059814
OLHV01007656
180053
Gammaproteobacteria
CAT
Met
>WENV183059759
OLHV01002478
318262
Gammaproteobacteria
GTG
His
>WENV183059731
OLHV01001125
140925
Gammaproteobacteria
GTA
Tyr
>WENV183059839
OLHV01011968
285584
Gammaproteobacteria
TTT
Lys
>WENV183059716
OLHV01000664
180717
Gammaproteobacteria
CCA
Trp
>WENV183059551
OLHV01000001
296670
Gammaproteobacteria
TGT
Thr
>WENV183059570
OLHV01000012
313571
Gammaproteobacteria
GCC
Gly
>WENV183059776
OLHV01003238
285953
Gammaproteobacteria
CCT
Arg
>WENV183059832
OLHV01010831
178006
Gammaproteobacteria
GGG
Pro
>WENV183059645
OLHV01000134
313852
Gammaproteobacteria
TTC
Glu
>WENV183059641
OLHV01000134
313852
Gammaproteobacteria
TTC
Glu
>WENV183059639
OLHV01000134
313852
Gammaproteobacteria
TTC
Glu
>WENV183059606
OLHV01000054
313852
Gammaproteobacteria
TTC
Glu
>WENV183059582
OLHV01000027
313852
Gammaproteobacteria
TTC
Glu
>WENV183059692
OLHV01000302
317782
Gammaproteobacteria
TAC
Val
>WENV183059623
OLHV01000083
181513
Gammaproteobacteria
TGG
Pro
>WENV183059621
OLHV01000081
181513
Gammaproteobacteria
TGG
Pro
>WENV183059607
OLHV01000054
181513
Gammaproteobacteria
TGG
Pro
>WENV183059567
OLHV01000007
181513
Gammaproteobacteria
TGG
Pro
>WENV183059700
OLHV01000369
182472
Gammaproteobacteria
GTC
Asp
>WENV183059685
OLHV01000262
280812
Gammaproteobacteria
GAA
Phe
>WENV183059842
OLHV01012963
118204
Gammaproteobacteria
CAA
Leu
>WENV183059791
OLHV01004605
180998
Gammaproteobacteria
GAC
Val
>WENV183059826
OLHV01008849
401684
Gammaproteobacteria
CCT
Arg
>WENV183059628
OLHV01000092
178169
Gammaproteobacteria
GAC
Val
>WENV183059579
OLHV01000024
178169
Gammaproteobacteria
GAC
Val
>WENV183059560
OLHV01000003
178169
Gammaproteobacteria
GAC
Val
>WENV183059742
OLHV01001879
180718
Gammaproteobacteria
CAT
Met
>WENV183059637
OLHV01000106
334421
Gammaproteobacteria
TGT
Thr
>WENV183059592
OLHV01000034
296684
Gammaproteobacteria
GGT
Thr
>WENV183059816
OLHV01008205
337925
Gammaproteobacteria
TGC
Ala
>WENV183059834
OLHV01011091
282683
Gammaproteobacteria
GGC
Ala
>WENV183059725
OLHV01001046
176544
Gammaproteobacteria
CAT
Met
>WENV183059737
OLHV01001495
20620
Gammaproteobacteria
TGA
Ser
>WENV183059780
OLHV01003751
317792
Gammaproteobacteria
TGC
Ala
>WENV183059757
OLHV01002394
296672
Gammaproteobacteria
GGT
Thr
>WENV183059720
OLHV01000894
56623
Gammaproteobacteria
GGA
Ser
>WENV183059714
OLHV01000659
56623
Gammaproteobacteria
GGA
Ser
>WENV183059735
OLHV01001250
402799
Gammaproteobacteria
TTG
Gln
>WENV183059770
OLHV01002965
285547
Gammaproteobacteria
TTG
Gln
>WENV183059763
OLHV01002670
180681
Gammaproteobacteria
TGG
Pro
>WENV183059746
OLHV01002017
285955
Gammaproteobacteria
GTT
Asn
>WENV183059760
OLHV01002478
178009
Gammaproteobacteria
TGG
Pro
>WENV183059784
OLHV01004052
14091
Gammaproteobacteria
TGA
Ser
>WENV183059580
OLHV01000024
296680
Gammaproteobacteria
GTT
Asn
>WENV183059566
OLHV01000007
296680
Gammaproteobacteria
GTT
Asn
>WENV183059785
OLHV01004241
120800
Gammaproteobacteria
CAA
Leu
>WENV183059754
OLHV01002288
285954
Gammaproteobacteria
GAA
Phe
>WENV183059769
OLHV01002965
118640
Gammaproteobacteria
TAG
Leu
>WENV183059829
OLHV01010112
76206
Gammaproteobacteria
TAA
Leu
>WENV183059626
OLHV01000086
141076
Gammaproteobacteria
GTA
Tyr
>WENV183059590
OLHV01000034
141076
Gammaproteobacteria
GTA
Tyr
>WENV183059789
OLHV01004464
56726
Gammaproteobacteria
GGA
Ser
>WENV183059730
OLHV01001125
282902
Gammaproteobacteria
TGT
Thr
>WENV183059762
OLHV01002639
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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