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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183563066
OOBX01000002
245301
Actinomycetota
GCC
Gly
>WENV183563065
OOBX01000002
245301
Actinomycetota
GCC
Gly
>WENV183563063
OOBX01000002
245301
Actinomycetota
GCC
Gly
>WENV183563064
OOBX01000002
412834
Actinomycetota
GCA
Cys
>WENV183563084
OOBX01000004
37070
Actinomycetota
CGA
Ser
>WENV183563085
OOBX01000004
16219
Actinomycetota
GCT
Ser
>WENV183563086
OOBX01000004
235101
Actinomycetota
TTT
Lys
>WENV183563097
OOBX01000004
144625
Actinomycetota
GTC
Asp
>WENV183563082
OOBX01000004
144625
Actinomycetota
GTC
Asp
>WENV183563098
OOBX01000004
144593
Actinomycetota
TAT
Ile
>WENV183563093
OOBX01000004
98279
Actinomycetota
GTA
Tyr
>WENV183563088
OOBX01000004
338148
Actinomycetota
CTG
Gln
>WENV183563090
OOBX01000004
113601
Actinomycetota
TAG
Leu
>WENV183563089
OOBX01000004
235121
Actinomycetota
CGT
Thr
>WENV183563095
OOBX01000004
44851
Actinomycetota
TGA
Ser
>WENV183563106
OOBX01000006
119475
Actinomycetota
TAA
Leu
>WENV183563119
OOBX01000006
16223
Actinomycetota
GAG
Leu
>WENV183563113
OOBX01000006
235148
Actinomycetota
GTT
Asn
>WENV183563110
OOBX01000006
235148
Actinomycetota
GTT
Asn
>WENV183563109
OOBX01000006
235148
Actinomycetota
GTT
Asn
>WENV183563107
OOBX01000006
144595
Actinomycetota
CAA
Leu
>WENV183563118
OOBX01000006
145343
Actinomycetota
GGG
Pro
>WENV183563108
OOBX01000006
144635
Actinomycetota
TGG
Pro
>WENV183563112
OOBX01000006
235173
Actinomycetota
GGC
Ala
>WENV183563137
OOBX01000009
153948
Actinomycetota
GGG
Pro
>WENV183563144
OOBX01000009
414234
Actinomycetota
CTG
Gln
>WENV183563140
OOBX01000009
158513
Actinomycetota
TGG
Pro
>WENV183563168
OOBX01000016
235194
Actinomycetota
GTG
His
>WENV183563167
OOBX01000016
121510
Actinomycetota
TAA
Leu
>WENV183563166
OOBX01000016
144823
Actinomycetota
TCT
Arg
>WENV183563171
OOBX01000019
162208
Actinomycetota
TAC
Val
>WENV183563192
OOBX01000032
338239
Actinomycetota
TTC
Glu
>WENV183563194
OOBX01000032
44855
Actinomycetota
TGA
Ser
>WENV183563197
OOBX01000032
144825
Actinomycetota
CAT
Met
>WENV183563198
OOBX01000032
235348
Actinomycetota
CCT
Arg
>WENV183563219
OOBX01000035
144660
Actinomycetota
TAC
Val
>WENV183563225
OOBX01000038
235146
Actinomycetota
CGT
Thr
>WENV183563228
OOBX01000038
166493
Actinomycetota
CTT
Lys
>WENV183563223
OOBX01000038
273786
Actinomycetota
CGT
Thr
>WENV183563227
OOBX01000038
235101
Actinomycetota
TTT
Lys
>WENV183563231
OOBX01000038
356045
Actinomycetota
GAC
Val
>WENV183563232
OOBX01000038
235199
Actinomycetota
CAC
Val
>WENV183563229
OOBX01000038
254857
Actinomycetota
CCG
Arg
>WENV183563224
OOBX01000038
113601
Actinomycetota
TAG
Leu
>WENV183563255
OOBX01000055
144589
Actinomycetota
ACG
Arg
>WENV183563254
OOBX01000055
144589
Actinomycetota
ACG
Arg
>WENV183563298
OOBX01000075
144636
Actinomycetota
GAT
Ile
>WENV183563305
OOBX01000078
153915
Actinomycetota
ACG
Arg
>WENV183563304
OOBX01000078
153915
Actinomycetota
ACG
Arg
>WENV183563325
OOBX01000102
235153
Actinomycetota
CCT
Arg
>WENV183563337
OOBX01000109
23370
Actinomycetota
GCT
Ser
>WENV183563338
OOBX01000109
44862
Actinomycetota
CGA
Ser
>WENV183563336
OOBX01000109
144700
Actinomycetota
CAT
Met
>WENV183563335
OOBX01000109
95593
Actinomycetota
>WENV183563346
OOBX01000115
235174
Actinomycetota
TGC
Ala
>WENV183563348
OOBX01000115
411554
Actinomycetota
CCC
Gly
>WENV183563344
OOBX01000115
80622
Actinomycetota
CAG
Leu
>WENV183563347
OOBX01000115
235173
Actinomycetota
GGC
Ala
>WENV183563351
OOBX01000122
235149
Actinomycetota
CCT
Arg
>WENV183563383
OOBX01000136
158720
Actinomycetota
ACG
Arg
>WENV183563382
OOBX01000136
158720
Actinomycetota
ACG
Arg
>WENV183563398
OOBX01000143
243671
Actinomycetota
CTC
Glu
>WENV183563399
OOBX01000143
338148
Actinomycetota
CTG
Gln
>WENV183563408
OOBX01000149
174149
Actinomycetota
GAT
Ile
>WENV183563409
OOBX01000149
235174
Actinomycetota
TGC
Ala
>WENV183563418
OOBX01000175
166750
Actinomycetota
CAT
Met
>WENV183563417
OOBX01000175
235092
Actinomycetota
CCG
Arg
>WENV183563424
OOBX01000177
356045
Actinomycetota
GAC
Val
>WENV183563426
OOBX01000177
235148
Actinomycetota
GTT
Asn
>WENV183563425
OOBX01000177
235148
Actinomycetota
GTT
Asn
>WENV183563427
OOBX01000177
243162
Actinomycetota
GTT
Asn
>WENV183563432
OOBX01000184
17009
Actinomycetota
GAG
Leu
>WENV183563462
OOBX01000217
144595
Actinomycetota
CAA
Leu
>WENV183563467
OOBX01000226
144826
Actinomycetota
GGG
Pro
>WENV183563520
OOBX01000343
176456
Actinomycetota
TCT
Arg
>WENV183563540
OOBX01000434
235347
Actinomycetota
GGC
Ala
>WENV183563541
OOBX01000434
235347
Actinomycetota
GGC
Ala
>WENV183563539
OOBX01000434
413665
Actinomycetota
TTG
Gln
>WENV183563548
OOBX01000473
47164
Actinomycetota
GGA
Ser
>WENV183563566
OOBX01000592
411601
Actinomycetota
CCC
Gly
>WENV183563567
OOBX01000592
80622
Actinomycetota
CAG
Leu
>WENV183563570
OOBX01000608
144600
Actinomycetota
TGG
Pro
>WENV183563721
OOBX01007216
95687
Actinomycetota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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