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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV086671
BABG01002645
144612
Bacillota
TCT
Arg
>WENV086703
BABG01003900
144612
Bacillota
TCT
Arg
>WENV086791
BABG01009363
235134
Bacillota
GAA
Phe
>WENV086716
BABG01004574
235098
Bacillota
GAC
Val
>WENV086550
BABG01000027
155040
Bacillota
GAT
Ile
>WENV086699
BABG01003656
44854
Bacillota
TGA
Ser
>WENV086572
BABG01000051
144577
Bacillota
GAT
Ile
>WENV086583
BABG01000108
144577
Bacillota
GAT
Ile
>WENV086607
BABG01000480
144577
Bacillota
GAT
Ile
>WENV086652
BABG01001611
144577
Bacillota
GAT
Ile
>WENV086701
BABG01003660
338147
Bacillota
CTC
Glu
>WENV086694
BABG01003387
235150
Bacillota
TGC
Ala
>WENV086684
BABG01003157
235150
Bacillota
TGC
Ala
>WENV086554
BABG01000033
235150
Bacillota
TGC
Ala
>WENV086859
BABG01015078
235137
Bacillota
TGC
Ala
>WENV086835
BABG01012843
235137
Bacillota
TGC
Ala
>WENV086647
BABG01001397
235137
Bacillota
TGC
Ala
>WENV086851
BABG01013751
235294
Bacillota
TGC
Ala
>WENV086862
BABG01015463
235294
Bacillota
TGC
Ala
>WENV086548
BABG01000027
237265
Bacillota
TAC
Val
>WENV086913
BABG01022425
235114
Bacillota
TTT
Lys
>WENV086739
BABG01006105
235114
Bacillota
TTT
Lys
>WENV086881
BABG01018037
235091
Bacillota
CTT
Lys
>WENV086753
BABG01006625
235091
Bacillota
CTT
Lys
>WENV086598
BABG01000265
235091
Bacillota
CTT
Lys
>WENV086582
BABG01000108
235091
Bacillota
CTT
Lys
>WENV086887
BABG01018802
44859
Bacillota
AAG
Leu
>WENV086620
BABG01000567
11034
Bacillota
GGA
Ser
>WENV086793
BABG01009600
10943
Bacillota
GGA
Ser
>WENV086733
BABG01005899
235079
Bacillota
GAA
Phe
>WENV086639
BABG01001111
16266
Bacillota
GCT
Ser
>WENV086663
BABG01002368
235087
Bacillota
TGC
Ala
>WENV086651
BABG01001611
235087
Bacillota
TGC
Ala
>WENV086608
BABG01000480
235087
Bacillota
TGC
Ala
>WENV086584
BABG01000108
235087
Bacillota
TGC
Ala
>WENV086571
BABG01000051
235087
Bacillota
TGC
Ala
>WENV086830
BABG01012486
149041
Bacillota
GTC
Asp
>WENV086559
BABG01000033
149041
Bacillota
GTC
Asp
>WENV086599
BABG01000265
338149
Bacillota
CTC
Glu
>WENV086586
BABG01000120
338149
Bacillota
CTC
Glu
>WENV086546
BABG01000027
80954
Bacillota
TAG
Leu
>WENV086813
BABG01011352
162445
Bacillota
CAT
Met
>WENV086959
BABG01033000
152492
Bacillota
GGG
Pro
>WENV086794
BABG01009600
148268
Bacillota
CGG
Pro
>WENV086911
BABG01022425
144610
Bacillota
GTG
His
>WENV086856
BABG01014323
411547
Bacillota
CTG
Gln
>WENV086759
BABG01007107
411547
Bacillota
CTG
Gln
>WENV086869
BABG01016141
147684
Bacillota
ACG
Arg
>WENV086700
BABG01003656
4624
Bacillota
GCT
Ser
>WENV086918
BABG01022694
235095
Bacillota
GGT
Thr
>WENV086854
BABG01014283
235095
Bacillota
GGT
Thr
>WENV086547
BABG01000027
238497
Bacillota
TTT
Lys
>WENV086938
BABG01028445
241471
Bacillota
TGC
Ala
>WENV086832
BABG01012486
239832
Bacillota
TGT
Thr
>WENV086928
BABG01025501
411549
Bacillota
TTG
Gln
>WENV086683
BABG01003044
235142
Bacillota
CTT
Lys
>WENV086657
BABG01001912
237846
Bacillota
GCC
Gly
>WENV086797
BABG01009903
80612
Bacillota
GTA
Tyr
>WENV086625
BABG01000612
80612
Bacillota
GTA
Tyr
>WENV086815
BABG01011548
235124
Bacillota
TGG
Pro
>WENV086702
BABG01003674
235124
Bacillota
TGG
Pro
>WENV086837
BABG01012965
144583
Bacillota
ACG
Arg
>WENV086581
BABG01000097
144583
Bacillota
ACG
Arg
>WENV086745
BABG01006105
144652
Bacillota
GTC
Asp
>WENV086566
BABG01000042
144652
Bacillota
GTC
Asp
>WENV086677
BABG01002735
144621
Bacillota
GTT
Asn
>WENV086740
BABG01006105
235113
Bacillota
GAA
Phe
>WENV086897
BABG01020664
58712
Bacillota
CAG
Leu
>WENV086878
BABG01017300
58712
Bacillota
CAG
Leu
>WENV086780
BABG01008609
58712
Bacillota
CAG
Leu
>WENV086769
BABG01007218
58712
Bacillota
CAG
Leu
>WENV086758
BABG01007090
58712
Bacillota
CAG
Leu
>WENV086633
BABG01000858
58712
Bacillota
CAG
Leu
>WENV086927
BABG01024882
245296
Bacillota
CCC
Gly
>WENV086728
BABG01005434
245296
Bacillota
CCC
Gly
>WENV086893
BABG01020390
144594
Bacillota
CAC
Val
>WENV086778
BABG01008494
144594
Bacillota
CAC
Val
>WENV086595
BABG01000186
144594
Bacillota
CAC
Val
>WENV086873
BABG01016567
95563
Bacillota
GTA
Tyr
>WENV086742
BABG01006105
95563
Bacillota
GTA
Tyr
>WENV086872
BABG01016536
114075
Bacillota
TAG
Leu
>WENV086575
BABG01000076
238945
Bacillota
GCC
Gly
>WENV086734
BABG01005899
249259
Bacillota
GCC
Gly
>WENV086946
BABG01029349
338128
Bacillota
TTC
Glu
>WENV086576
BABG01000081
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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