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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182019418
OHBY01001055
24650
Bacillota
TAA
Leu
>WENV182019369
OHBY01000590
144612
Bacillota
TCT
Arg
>WENV182019239
OHBY01000079
267649
Bacillota
TAC
Val
>WENV182019412
OHBY01001012
267649
Bacillota
TAC
Val
>WENV182019643
OHBY01017765
235098
Bacillota
GAC
Val
>WENV182019209
OHBY01000032
148239
Bacillota
TCT
Arg
>WENV182019397
OHBY01000855
44854
Bacillota
TGA
Ser
>WENV182019659
OHBY01022703
235154
Bacillota
GTT
Asn
>WENV182019473
OHBY01001958
59312
Bacillota
CAG
Leu
>WENV182019671
OHBY01025301
338147
Bacillota
CTC
Glu
>WENV182019650
OHBY01019981
235150
Bacillota
TGC
Ala
>WENV182019446
OHBY01001421
44859
Bacillota
AAG
Leu
>WENV182019380
OHBY01000677
11034
Bacillota
GGA
Ser
>WENV182019210
OHBY01000032
156937
Bacillota
GTG
His
>WENV182019462
OHBY01001719
235079
Bacillota
GAA
Phe
>WENV182019387
OHBY01000757
338149
Bacillota
CTC
Glu
>WENV182019431
OHBY01001141
245298
Bacillota
CGG
Pro
>WENV182019296
OHBY01000199
37269
Bacillota
TGA
Ser
>WENV182019530
OHBY01004847
162445
Bacillota
CAT
Met
>WENV182019445
OHBY01001411
152492
Bacillota
GGG
Pro
>WENV182019590
OHBY01009467
240017
Bacillota
GCC
Gly
>WENV182019439
OHBY01001255
411547
Bacillota
CTG
Gln
>WENV182019430
OHBY01001141
411547
Bacillota
CTG
Gln
>WENV182019407
OHBY01000951
147684
Bacillota
ACG
Arg
>WENV182019398
OHBY01000855
4624
Bacillota
GCT
Ser
>WENV182019520
OHBY01004336
235095
Bacillota
GGT
Thr
>WENV182019402
OHBY01000907
411549
Bacillota
TTG
Gln
>WENV182019427
OHBY01001128
235142
Bacillota
CTT
Lys
>WENV182019444
OHBY01001408
148188
Bacillota
CCG
Arg
>WENV182019459
OHBY01001630
80612
Bacillota
GTA
Tyr
>WENV182019175
OHBY01000014
235127
Bacillota
TTT
Lys
>WENV182019510
OHBY01003287
235124
Bacillota
TGG
Pro
>WENV182019334
OHBY01000333
144583
Bacillota
ACG
Arg
>WENV182019388
OHBY01000757
144621
Bacillota
GTT
Asn
>WENV182019571
OHBY01007691
235113
Bacillota
GAA
Phe
>WENV182019458
OHBY01001630
58712
Bacillota
CAG
Leu
>WENV182019371
OHBY01000590
58712
Bacillota
CAG
Leu
>WENV182019366
OHBY01000564
245296
Bacillota
CCC
Gly
>WENV182019638
OHBY01015251
272992
Bacillota
CTT
Lys
>WENV182019509
OHBY01003142
344240
Bacillota
GCC
Gly
>WENV182019467
OHBY01001800
144594
Bacillota
CAC
Val
>WENV182019377
OHBY01000639
95563
Bacillota
GTA
Tyr
>WENV182019492
OHBY01002534
272488
Bacillota
GAA
Phe
>WENV182019174
OHBY01000014
272488
Bacillota
GAA
Phe
>WENV182019588
OHBY01009140
238945
Bacillota
GCC
Gly
>WENV182019534
OHBY01005025
238945
Bacillota
GCC
Gly
>WENV182019463
OHBY01001719
249259
Bacillota
GCC
Gly
>WENV182019433
OHBY01001158
338128
Bacillota
TTC
Glu
>WENV182019586
OHBY01008962
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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