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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183544537
OOAO01004712
24650
Bacillota
TAA
Leu
>WENV183544655
OOAO01010019
155958
Bacillota
GAT
Ile
>WENV183544233
OOAO01001374
309417
Bacillota
GGC
Ala
>WENV183544575
OOAO01005608
309417
Bacillota
GGC
Ala
>WENV183544054
OOAO01000652
144612
Bacillota
TCT
Arg
>WENV183544466
OOAO01003514
144612
Bacillota
TCT
Arg
>WENV183543796
OOAO01000152
235098
Bacillota
GAC
Val
>WENV183544569
OOAO01005455
235098
Bacillota
GAC
Val
>WENV183544403
OOAO01002767
338152
Bacillota
TTC
Glu
>WENV183544091
OOAO01000746
148239
Bacillota
TCT
Arg
>WENV183544405
OOAO01002768
44854
Bacillota
TGA
Ser
>WENV183544148
OOAO01000967
44854
Bacillota
TGA
Ser
>WENV183543725
OOAO01000089
37071
Bacillota
TGA
Ser
>WENV183544752
OOAO01020304
246023
Bacillota
TGC
Ala
>WENV183543960
OOAO01000420
59312
Bacillota
CAG
Leu
>WENV183544619
OOAO01007475
238910
Bacillota
CTT
Lys
>WENV183544163
OOAO01001030
338147
Bacillota
CTC
Glu
>WENV183544152
OOAO01000985
338147
Bacillota
CTC
Glu
>WENV183543747
OOAO01000102
338147
Bacillota
CTC
Glu
>WENV183544660
OOAO01010183
235150
Bacillota
TGC
Ala
>WENV183544813
OOAO01032733
155273
Bacillota
CAT
Met
>WENV183544741
OOAO01018822
293599
Bacillota
CTT
Lys
>WENV183544008
OOAO01000515
235114
Bacillota
TTT
Lys
>WENV183544047
OOAO01000617
429429
Bacillota
CCA
Trp
>WENV183544168
OOAO01001079
313454
Bacillota
GAA
Phe
>WENV183543917
OOAO01000333
313454
Bacillota
GAA
Phe
>WENV183543958
OOAO01000420
44859
Bacillota
AAG
Leu
>WENV183543959
OOAO01000420
44859
Bacillota
AAG
Leu
>WENV183544252
OOAO01001540
11034
Bacillota
GGA
Ser
>WENV183543763
OOAO01000111
11034
Bacillota
GGA
Ser
>WENV183544092
OOAO01000746
156937
Bacillota
GTG
His
>WENV183544824
OOAO01037587
235079
Bacillota
GAA
Phe
>WENV183544599
OOAO01006323
338149
Bacillota
CTC
Glu
>WENV183544593
OOAO01006160
245298
Bacillota
CGG
Pro
>WENV183544098
OOAO01000754
37269
Bacillota
TGA
Ser
>WENV183544043
OOAO01000612
287000
Bacillota
GTT
Asn
>WENV183544236
OOAO01001377
162445
Bacillota
CAT
Met
>WENV183544751
OOAO01020304
201704
Bacillota
GAT
Ile
>WENV183544376
OOAO01002522
152492
Bacillota
GGG
Pro
>WENV183544033
OOAO01000573
152492
Bacillota
GGG
Pro
>WENV183544347
OOAO01002286
235078
Bacillota
TAC
Val
>WENV183544006
OOAO01000515
144610
Bacillota
GTG
His
>WENV183544350
OOAO01002286
240017
Bacillota
GCC
Gly
>WENV183544592
OOAO01006160
411547
Bacillota
CTG
Gln
>WENV183543834
OOAO01000190
411547
Bacillota
CTG
Gln
>WENV183543652
OOAO01000029
411547
Bacillota
CTG
Gln
>WENV183544681
OOAO01012212
147684
Bacillota
ACG
Arg
>WENV183544406
OOAO01002768
4624
Bacillota
GCT
Ser
>WENV183544149
OOAO01000967
4624
Bacillota
GCT
Ser
>WENV183544202
OOAO01001233
313164
Bacillota
TTT
Lys
>WENV183544266
OOAO01001560
239832
Bacillota
TGT
Thr
>WENV183544096
OOAO01000751
419639
Bacillota
GCA
Cys
>WENV183544329
OOAO01002137
411549
Bacillota
TTG
Gln
>WENV183544239
OOAO01001434
411549
Bacillota
TTG
Gln
>WENV183543864
OOAO01000219
235142
Bacillota
CTT
Lys
>WENV183543681
OOAO01000053
235142
Bacillota
CTT
Lys
>WENV183544685
OOAO01012487
148188
Bacillota
CCG
Arg
>WENV183544589
OOAO01006109
80612
Bacillota
GTA
Tyr
>WENV183544469
OOAO01003526
80612
Bacillota
GTA
Tyr
>WENV183544743
OOAO01019393
241432
Bacillota
TGT
Thr
>WENV183544516
OOAO01004100
235124
Bacillota
TGG
Pro
>WENV183543797
OOAO01000152
235124
Bacillota
TGG
Pro
>WENV183544174
OOAO01001096
338129
Bacillota
TGT
Thr
>WENV183543942
OOAO01000388
338129
Bacillota
TGT
Thr
>WENV183544244
OOAO01001443
144583
Bacillota
ACG
Arg
>WENV183543999
OOAO01000515
144652
Bacillota
GTC
Asp
>WENV183544850
OOAO01046379
247734
Bacillota
TGC
Ala
>WENV183544390
OOAO01002676
235171
Bacillota
CCA
Trp
>WENV183544600
OOAO01006323
144621
Bacillota
GTT
Asn
>WENV183543900
OOAO01000296
144621
Bacillota
GTT
Asn
>WENV183543722
OOAO01000089
235113
Bacillota
GAA
Phe
>WENV183543816
OOAO01000167
277200
Bacillota
GGC
Ala
>WENV183543733
OOAO01000093
243098
Bacillota
GGT
Thr
>WENV183544245
OOAO01001474
58712
Bacillota
CAG
Leu
>WENV183544413
OOAO01002835
245296
Bacillota
CCC
Gly
>WENV183544675
OOAO01011804
272992
Bacillota
CTT
Lys
>WENV183543663
OOAO01000038
344240
Bacillota
GCC
Gly
>WENV183543921
OOAO01000342
196632
Bacillota
GTC
Asp
>WENV183543798
OOAO01000152
144594
Bacillota
CAC
Val
>WENV183543933
OOAO01000367
95563
Bacillota
GTA
Tyr
>WENV183544422
OOAO01002991
338128
Bacillota
TTC
Glu
>WENV183544187
OOAO01001138
338128
Bacillota
TTC
Glu
>WENV183543922
OOAO01000342
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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