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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183586572
OOCT01000116
419639
Bacillota
GCA
Cys
>WENV183586571
OOCT01000116
344240
Bacillota
GCC
Gly
>WENV183586566
OOCT01000116
344240
Bacillota
GCC
Gly
>WENV183586569
OOCT01000116
196632
Bacillota
GTC
Asp
>WENV183586564
OOCT01000116
196632
Bacillota
GTC
Asp
>WENV183586570
OOCT01000116
245344
Bacillota
GAA
Phe
>WENV183586565
OOCT01000116
245344
Bacillota
GAA
Phe
>WENV183586615
OOCT01000174
344240
Bacillota
GCC
Gly
>WENV183586682
OOCT01000259
241441
Bacillota
GCC
Gly
>WENV183586687
OOCT01000265
202812
Bacillota
CAT
Met
>WENV183586691
OOCT01000268
196621
Bacillota
GTC
Asp
>WENV183586693
OOCT01000268
235095
Bacillota
GGT
Thr
>WENV183586692
OOCT01000268
235095
Bacillota
GGT
Thr
>WENV183586690
OOCT01000268
235171
Bacillota
CCA
Trp
>WENV183586696
OOCT01000270
157838
Bacillota
GTC
Asp
>WENV183586697
OOCT01000270
295033
Bacillota
GAA
Phe
>WENV183586698
OOCT01000270
248965
Bacillota
GCC
Gly
>WENV183586729
OOCT01000301
413152
Bacillota
TCC
Gly
>WENV183586752
OOCT01000322
243098
Bacillota
GGT
Thr
>WENV183586766
OOCT01000356
44854
Bacillota
TGA
Ser
>WENV183586767
OOCT01000356
4624
Bacillota
GCT
Ser
>WENV183586769
OOCT01000360
144583
Bacillota
ACG
Arg
>WENV183586779
OOCT01000371
196632
Bacillota
GTC
Asp
>WENV183586780
OOCT01000371
245344
Bacillota
GAA
Phe
>WENV183586783
OOCT01000376
245298
Bacillota
CGG
Pro
>WENV183586782
OOCT01000376
411547
Bacillota
CTG
Gln
>WENV183586809
OOCT01000453
144594
Bacillota
CAC
Val
>WENV183586810
OOCT01000457
245296
Bacillota
CCC
Gly
>WENV183586816
OOCT01000469
256380
Bacillota
>WENV183586825
OOCT01000493
148239
Bacillota
TCT
Arg
>WENV183586826
OOCT01000493
144610
Bacillota
GTG
His
>WENV183586829
OOCT01000493
114075
Bacillota
TAG
Leu
>WENV183586843
OOCT01000531
411549
Bacillota
TTG
Gln
>WENV183586845
OOCT01000534
302150
Bacillota
TAC
Val
>WENV183586844
OOCT01000534
144599
Bacillota
GTC
Asp
>WENV183586847
OOCT01000534
100326
Bacillota
GTA
Tyr
>WENV183586849
OOCT01000534
238974
Bacillota
GAA
Phe
>WENV183586862
OOCT01000558
100326
Bacillota
GTA
Tyr
>WENV183586860
OOCT01000558
238974
Bacillota
GAA
Phe
>WENV183586902
OOCT01000698
304022
Bacillota
GCC
Gly
>WENV183586901
OOCT01000698
235079
Bacillota
GAA
Phe
>WENV183586908
OOCT01000710
148188
Bacillota
CCG
Arg
>WENV183586916
OOCT01000783
11034
Bacillota
GGA
Ser
>WENV183586938
OOCT01000912
196621
Bacillota
GTC
Asp
>WENV183586937
OOCT01000912
304022
Bacillota
GCC
Gly
>WENV183586939
OOCT01000913
239080
Bacillota
CTG
Gln
>WENV183586949
OOCT01000980
411547
Bacillota
CTG
Gln
>WENV183586958
OOCT01001040
309417
Bacillota
GGC
Ala
>WENV183586963
OOCT01001073
241441
Bacillota
GCC
Gly
>WENV183586967
OOCT01001179
338128
Bacillota
TTC
Glu
>WENV183586970
OOCT01001199
338149
Bacillota
CTC
Glu
>WENV183586971
OOCT01001199
144621
Bacillota
GTT
Asn
>WENV183586973
OOCT01001236
340265
Bacillota
GCC
Gly
>WENV183586990
OOCT01001336
340263
Bacillota
TTC
Glu
>WENV183586991
OOCT01001336
304759
Bacillota
TAC
Val
>WENV183586989
OOCT01001336
239078
Bacillota
TTT
Lys
>WENV183586994
OOCT01001421
338129
Bacillota
TGT
Thr
>WENV183587002
OOCT01001466
277200
Bacillota
GGC
Ala
>WENV183587016
OOCT01001579
196621
Bacillota
GTC
Asp
>WENV183587017
OOCT01001579
304022
Bacillota
GCC
Gly
>WENV183587015
OOCT01001579
304022
Bacillota
GCC
Gly
>WENV183587014
OOCT01001579
235079
Bacillota
GAA
Phe
>WENV183587019
OOCT01001579
80612
Bacillota
GTA
Tyr
>WENV183587036
OOCT01001897
235124
Bacillota
TGG
Pro
>WENV183587046
OOCT01002019
340263
Bacillota
TTC
Glu
>WENV183587039
OOCT01002019
148348
Bacillota
GTC
Asp
>WENV183587040
OOCT01002019
239076
Bacillota
GAA
Phe
>WENV183587055
OOCT01002092
296878
Bacillota
GTT
Asn
>WENV183587064
OOCT01002319
341763
Bacillota
CTC
Glu
>WENV183587068
OOCT01002460
58712
Bacillota
CAG
Leu
>WENV183587104
OOCT01004542
246023
Bacillota
TGC
Ala
>WENV183587103
OOCT01004542
201704
Bacillota
GAT
Ile
>WENV183587110
OOCT01004787
338147
Bacillota
CTC
Glu
>WENV183587120
OOCT01005703
235098
Bacillota
GAC
Val
>WENV183587125
OOCT01006521
235150
Bacillota
TGC
Ala
>WENV183587128
OOCT01007616
235142
Bacillota
CTT
Lys
>WENV183587139
OOCT01008637
302150
Bacillota
TAC
Val
>WENV183587138
OOCT01008637
144599
Bacillota
GTC
Asp
>WENV183587154
OOCT01010712
235137
Bacillota
TGC
Ala
>WENV183587156
OOCT01012018
147135
Bacillota
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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