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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183610328
OODS01000428
24650
Bacillota
TAA
Leu
>WENV183610609
OODS01002411
37213
Bacillota
TGA
Ser
>WENV183610276
OODS01000298
144612
Bacillota
TCT
Arg
>WENV183610566
OODS01002026
267649
Bacillota
TAC
Val
>WENV183610352
OODS01000499
267556
Bacillota
TAC
Val
>WENV183610586
OODS01002179
267556
Bacillota
TAC
Val
>WENV183610704
OODS01004332
267556
Bacillota
TAC
Val
>WENV183610412
OODS01000792
235098
Bacillota
GAC
Val
>WENV183610610
OODS01002412
235098
Bacillota
GAC
Val
>WENV183610684
OODS01003723
235098
Bacillota
GAC
Val
>WENV183610771
OODS01006400
235098
Bacillota
GAC
Val
>WENV183610186
OODS01000122
338152
Bacillota
TTC
Glu
>WENV183610715
OODS01004542
44854
Bacillota
TGA
Ser
>WENV183610361
OODS01000524
44854
Bacillota
TGA
Ser
>WENV183610676
OODS01003599
235154
Bacillota
GTT
Asn
>WENV183611046
OODS01036958
246023
Bacillota
TGC
Ala
>WENV183610964
OODS01021777
147639
Bacillota
ACG
Arg
>WENV183610434
OODS01000893
238910
Bacillota
CTT
Lys
>WENV183610087
OODS01000002
338147
Bacillota
CTC
Glu
>WENV183610927
OODS01016806
235150
Bacillota
TGC
Ala
>WENV183611014
OODS01030011
235137
Bacillota
TGC
Ala
>WENV183611089
OODS01048262
182792
Bacillota
GTC
Asp
>WENV183610287
OODS01000315
235079
Bacillota
GAA
Phe
>WENV183610917
OODS01015286
16266
Bacillota
GCT
Ser
>WENV183610761
OODS01006049
245298
Bacillota
CGG
Pro
>WENV183610672
OODS01003573
245298
Bacillota
CGG
Pro
>WENV183610394
OODS01000682
245298
Bacillota
CGG
Pro
>WENV183610587
OODS01002179
162445
Bacillota
CAT
Met
>WENV183610643
OODS01003008
152492
Bacillota
GGG
Pro
>WENV183610947
OODS01020318
153911
Bacillota
GAT
Ile
>WENV183610491
OODS01001309
100326
Bacillota
GTA
Tyr
>WENV183610113
OODS01000029
100326
Bacillota
GTA
Tyr
>WENV183610760
OODS01006049
411547
Bacillota
CTG
Gln
>WENV183610671
OODS01003573
411547
Bacillota
CTG
Gln
>WENV183610560
OODS01001884
411547
Bacillota
CTG
Gln
>WENV183610437
OODS01000906
411547
Bacillota
CTG
Gln
>WENV183610419
OODS01000823
411547
Bacillota
CTG
Gln
>WENV183610393
OODS01000682
411547
Bacillota
CTG
Gln
>WENV183610756
OODS01005976
147684
Bacillota
ACG
Arg
>WENV183610564
OODS01001948
147684
Bacillota
ACG
Arg
>WENV183610716
OODS01004542
4624
Bacillota
GCT
Ser
>WENV183610362
OODS01000524
4624
Bacillota
GCT
Ser
>WENV183610466
OODS01001145
263765
Bacillota
TAC
Val
>WENV183610555
OODS01001814
18852
Bacillota
GCT
Ser
>WENV183610562
OODS01001921
235095
Bacillota
GGT
Thr
>WENV183610441
OODS01000929
235095
Bacillota
GGT
Thr
>WENV183610866
OODS01011095
239832
Bacillota
TGT
Thr
>WENV183610439
OODS01000928
419639
Bacillota
GCA
Cys
>WENV183610530
OODS01001626
411549
Bacillota
TTG
Gln
>WENV183610392
OODS01000682
411549
Bacillota
TTG
Gln
>WENV183610913
OODS01015137
59296
Bacillota
AAG
Leu
>WENV183610924
OODS01016554
148188
Bacillota
CCG
Arg
>WENV183610755
OODS01005973
148188
Bacillota
CCG
Arg
>WENV183610740
OODS01005207
148188
Bacillota
CCG
Arg
>WENV183610695
OODS01004127
80612
Bacillota
GTA
Tyr
>WENV183610344
OODS01000470
256380
Bacillota
>WENV183610812
OODS01008328
235124
Bacillota
TGG
Pro
>WENV183610654
OODS01003165
235124
Bacillota
TGG
Pro
>WENV183610445
OODS01000976
235124
Bacillota
TGG
Pro
>WENV183610330
OODS01000431
338129
Bacillota
TGT
Thr
>WENV183610851
OODS01010113
157838
Bacillota
GTC
Asp
>WENV183610446
OODS01000978
144583
Bacillota
ACG
Arg
>WENV183611088
OODS01048262
235171
Bacillota
CCA
Trp
>WENV183610429
OODS01000869
238974
Bacillota
GAA
Phe
>WENV183610742
OODS01005308
144621
Bacillota
GTT
Asn
>WENV183610537
OODS01001663
144621
Bacillota
GTT
Asn
>WENV183611054
OODS01037276
238747
Bacillota
GTG
His
>WENV183610982
OODS01023707
243098
Bacillota
GGT
Thr
>WENV183610627
OODS01002691
58712
Bacillota
CAG
Leu
>WENV183610347
OODS01000487
58712
Bacillota
CAG
Leu
>WENV183610228
OODS01000193
58712
Bacillota
CAG
Leu
>WENV183610496
OODS01001363
245296
Bacillota
CCC
Gly
>WENV183610252
OODS01000240
344240
Bacillota
GCC
Gly
>WENV183610987
OODS01024907
144594
Bacillota
CAC
Val
>WENV183610938
OODS01018882
272488
Bacillota
GAA
Phe
>WENV183610700
OODS01004272
272488
Bacillota
GAA
Phe
>WENV183610108
OODS01000020
238945
Bacillota
GCC
Gly
>WENV183610307
OODS01000347
249259
Bacillota
GCC
Gly
>WENV183610288
OODS01000315
249259
Bacillota
GCC
Gly
>WENV183610878
OODS01011813
273862
Bacillota
TGC
Ala
>WENV183611042
OODS01035621
338131
Bacillota
GCC
Gly
>WENV183610669
OODS01003511
338128
Bacillota
TTC
Glu
>WENV183610487
OODS01001282
338128
Bacillota
TTC
Glu
>WENV183610444
OODS01000960
338128
Bacillota
TTC
Glu
>WENV183610305
OODS01000340
338128
Bacillota
TTC
Glu
>WENV183610860
OODS01010345
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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