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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183654145
OQWA01012004
144594
Bacillota
CAC
Val
>WENV183654209
OQWA01015657
58712
Bacillota
CAG
Leu
>WENV183654216
OQWA01015752
184563
Bacillota
CAT
Met
>WENV183654198
OQWA01015114
169968
Bacillota
CAT
Met
>WENV183654044
OQWA01006807
154063
Bacillota
CGG
Pro
>WENV183654186
OQWA01014779
338149
Bacillota
CTC
Glu
>WENV183654187
OQWA01014779
272992
Bacillota
CTT
Lys
>WENV183654408
OQWA01034918
286137
Bacillota
GAA
Phe
>WENV183654530
OQWA01058464
272488
Bacillota
GAA
Phe
>WENV183653688
OQWA01000176
245344
Bacillota
GAA
Phe
>WENV183654114
OQWA01010328
144577
Bacillota
GAT
Ile
>WENV183654140
OQWA01011744
388249
Bacillota
GCA
Cys
>WENV183654371
OQWA01029639
419639
Bacillota
GCA
Cys
>WENV183653974
OQWA01004279
344240
Bacillota
GCC
Gly
>WENV183654202
OQWA01015299
248965
Bacillota
GCC
Gly
>WENV183654468
OQWA01046824
4624
Bacillota
GCT
Ser
>WENV183653938
OQWA01003267
18852
Bacillota
GCT
Ser
>WENV183654402
OQWA01033437
235095
Bacillota
GGT
Thr
>WENV183653754
OQWA01000587
243098
Bacillota
GGT
Thr
>WENV183654401
OQWA01033437
196621
Bacillota
GTC
Asp
>WENV183654047
OQWA01006953
163943
Bacillota
GTC
Asp
>WENV183654170
OQWA01013471
157838
Bacillota
GTC
Asp
>WENV183654137
OQWA01011744
157838
Bacillota
GTC
Asp
>WENV183653973
OQWA01004279
196632
Bacillota
GTC
Asp
>WENV183653687
OQWA01000176
196632
Bacillota
GTC
Asp
>WENV183653807
OQWA01001030
156937
Bacillota
GTG
His
>WENV183653893
OQWA01002314
144610
Bacillota
GTG
His
>WENV183653959
OQWA01003712
287000
Bacillota
GTT
Asn
>WENV183653958
OQWA01003712
287000
Bacillota
GTT
Asn
>WENV183654490
OQWA01051558
235289
Bacillota
GTT
Asn
>WENV183654136
OQWA01011744
300148
Bacillota
TAC
Val
>WENV183654525
OQWA01057873
413152
Bacillota
TCC
Gly
>WENV183654531
OQWA01058542
44854
Bacillota
TGA
Ser
>WENV183653816
OQWA01001319
37269
Bacillota
TGA
Ser
>WENV183653955
OQWA01003628
307003
Bacillota
TGC
Ala
>WENV183654309
OQWA01023310
235087
Bacillota
TGC
Ala
>WENV183654232
OQWA01016666
299139
Bacillota
TGC
Ala
>WENV183654367
OQWA01029208
338129
Bacillota
TGT
Thr
>WENV183653746
OQWA01000538
352996
Bacillota
TTC
Glu
>WENV183653678
OQWA01000117
248683
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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