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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183532211
OOAD01000010
413663
Bacteroidota
CTG
Gln
>WENV183532212
OOAD01000011
144695
Bacteroidota
CAT
Met
>WENV183532214
OOAD01000014
141635
Bacteroidota
TAC
Val
>WENV183532215
OOAD01000014
141635
Bacteroidota
TAC
Val
>WENV183532223
OOAD01000020
44852
Bacteroidota
TAA
Leu
>WENV183532228
OOAD01000027
20893
Bacteroidota
GGA
Ser
>WENV183532232
OOAD01000030
141635
Bacteroidota
TAC
Val
>WENV183532231
OOAD01000030
136244
Bacteroidota
TAC
Val
>WENV183532238
OOAD01000039
413663
Bacteroidota
CTG
Gln
>WENV183532240
OOAD01000043
95875
Bacteroidota
TAG
Leu
>WENV183532250
OOAD01000048
415558
Bacteroidota
TTG
Gln
>WENV183532256
OOAD01000057
338132
Bacteroidota
GCA
Cys
>WENV183532271
OOAD01000084
144933
Bacteroidota
TCT
Arg
>WENV183532280
OOAD01000090
143169
Bacteroidota
GGG
Pro
>WENV183532281
OOAD01000091
144656
Bacteroidota
GTG
His
>WENV183532282
OOAD01000091
16224
Bacteroidota
GGA
Ser
>WENV183532284
OOAD01000104
185921
Bacteroidota
GTC
Asp
>WENV183532304
OOAD01000144
144655
Bacteroidota
GGC
Ala
>WENV183532311
OOAD01000160
338124
Bacteroidota
CCG
Arg
>WENV183532318
OOAD01000181
56823
Bacteroidota
TGA
Ser
>WENV183532320
OOAD01000189
313363
Bacteroidota
GAA
Phe
>WENV183532325
OOAD01000200
238121
Bacteroidota
CTT
Lys
>WENV183532342
OOAD01000229
95559
Bacteroidota
TAG
Leu
>WENV183532344
OOAD01000235
412479
Bacteroidota
TTG
Gln
>WENV183532354
OOAD01000263
394247
Bacteroidota
CTC
Glu
>WENV183532353
OOAD01000263
394247
Bacteroidota
CTC
Glu
>WENV183532358
OOAD01000273
240012
Bacteroidota
CCC
Gly
>WENV183532366
OOAD01000296
235129
Bacteroidota
GCC
Gly
>WENV183532379
OOAD01000356
425638
Bacteroidota
CTG
Gln
>WENV183532383
OOAD01000365
436206
Bacteroidota
TTG
Gln
>WENV183532407
OOAD01000443
338132
Bacteroidota
GCA
Cys
>WENV183532410
OOAD01000465
80614
Bacteroidota
>WENV183532416
OOAD01000496
339412
Bacteroidota
GGT
Thr
>WENV183532417
OOAD01000496
237797
Bacteroidota
CCA
Trp
>WENV183532437
OOAD01000701
37076
Bacteroidota
TAA
Leu
>WENV183532439
OOAD01000714
235180
Bacteroidota
CCA
Trp
>WENV183532491
OOAD01001123
338486
Bacteroidota
CAT
Met
>WENV183532494
OOAD01001136
196394
Bacteroidota
GTC
Asp
>WENV183532493
OOAD01001136
196394
Bacteroidota
GTC
Asp
>WENV183532510
OOAD01001290
150485
Bacteroidota
GTT
Asn
>WENV183532532
OOAD01001490
56823
Bacteroidota
TGA
Ser
>WENV183532556
OOAD01001713
143169
Bacteroidota
GGG
Pro
>WENV183532570
OOAD01002058
144657
Bacteroidota
CGG
Pro
>WENV183532587
OOAD01002442
338125
Bacteroidota
CCT
Arg
>WENV183532659
OOAD01004054
56823
Bacteroidota
TGA
Ser
>WENV183532669
OOAD01004485
17323
Bacteroidota
GGA
Ser
>WENV183532700
OOAD01005541
16220
Bacteroidota
GGA
Ser
>WENV183532715
OOAD01006198
126965
Bacteroidota
GGG
Pro
>WENV183532745
OOAD01007692
235207
Bacteroidota
CAT
Met
>WENV183532751
OOAD01007995
95987
Bacteroidota
CAA
Leu
>WENV183532768
OOAD01009320
56823
Bacteroidota
TGA
Ser
>WENV183532786
OOAD01010843
339341
Bacteroidota
GGT
Thr
>WENV183532913
OOAD01024350
301449
Bacteroidota
CGG
Pro
>WENV183532926
OOAD01025916
19317
Bacteroidota
GGA
Ser
>WENV183533080
OOAD01066822
303954
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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