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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
92 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183556152
OOBO01000001
235097
Bacteroidota
TTT
Lys
>WENV183556271
OOBO01000197
235097
Bacteroidota
TTT
Lys
>WENV183556294
OOBO01000255
339412
Bacteroidota
GGT
Thr
>WENV183556739
OOBO01006682
235102
Bacteroidota
CGT
Thr
>WENV183556410
OOBO01000680
237796
Bacteroidota
CGT
Thr
>WENV183556633
OOBO01002949
144657
Bacteroidota
CGG
Pro
>WENV183556328
OOBO01000332
243025
Bacteroidota
CAT
Met
>WENV183556345
OOBO01000387
126966
Bacteroidota
TAC
Val
>WENV183556330
OOBO01000333
338155
Bacteroidota
CTC
Glu
>WENV183556567
OOBO01001948
126965
Bacteroidota
GGG
Pro
>WENV183556969
OOBO01047608
339341
Bacteroidota
GGT
Thr
>WENV183556361
OOBO01000447
343138
Bacteroidota
CCT
Arg
>WENV183556370
OOBO01000481
58715
Bacteroidota
GAG
Leu
>WENV183556849
OOBO01014936
46165
Bacteroidota
TGA
Ser
>WENV183556628
OOBO01002845
95618
Bacteroidota
TAG
Leu
>WENV183556285
OOBO01000234
24174
Bacteroidota
GCT
Ser
>WENV183556492
OOBO01001255
338486
Bacteroidota
CAT
Met
>WENV183556396
OOBO01000587
413663
Bacteroidota
CTG
Gln
>WENV183556263
OOBO01000177
415410
Bacteroidota
TTG
Gln
>WENV183556216
OOBO01000083
411543
Bacteroidota
CTG
Gln
>WENV183556518
OOBO01001492
59689
Bacteroidota
CAG
Leu
>WENV183556599
OOBO01002418
147147
Bacteroidota
GTG
His
>WENV183556359
OOBO01000430
155123
Bacteroidota
GTT
Asn
>WENV183556170
OOBO01000015
155123
Bacteroidota
GTT
Asn
>WENV183556251
OOBO01000141
235182
Bacteroidota
>WENV183556385
OOBO01000541
341950
Bacteroidota
>WENV183556637
OOBO01003082
272983
Bacteroidota
CGT
Thr
>WENV183556424
OOBO01000749
338124
Bacteroidota
CCG
Arg
>WENV183556445
OOBO01000901
146800
Bacteroidota
>WENV183556593
OOBO01002339
238121
Bacteroidota
CTT
Lys
>WENV183556595
OOBO01002352
126641
Bacteroidota
TAC
Val
>WENV183556743
OOBO01006988
338132
Bacteroidota
GCA
Cys
>WENV183556466
OOBO01001094
338132
Bacteroidota
GCA
Cys
>WENV183556390
OOBO01000577
338132
Bacteroidota
GCA
Cys
>WENV183556320
OOBO01000298
338132
Bacteroidota
GCA
Cys
>WENV183556305
OOBO01000281
338132
Bacteroidota
GCA
Cys
>WENV183556420
OOBO01000728
144688
Bacteroidota
CAT
Met
>WENV183556174
OOBO01000017
181746
Bacteroidota
GGC
Ala
>WENV183556738
OOBO01006671
58714
Bacteroidota
CAA
Leu
>WENV183556327
OOBO01000328
144933
Bacteroidota
TCT
Arg
>WENV183556191
OOBO01000044
144933
Bacteroidota
TCT
Arg
>WENV183556303
OOBO01000274
171336
Bacteroidota
GGC
Ala
>WENV183556602
OOBO01002447
144656
Bacteroidota
GTG
His
>WENV183556339
OOBO01000344
144656
Bacteroidota
GTG
His
>WENV183556520
OOBO01001494
235207
Bacteroidota
CAT
Met
>WENV183556519
OOBO01001494
235207
Bacteroidota
CAT
Met
>WENV183556273
OOBO01000203
235207
Bacteroidota
CAT
Met
>WENV183556475
OOBO01001173
144659
Bacteroidota
GTG
His
>WENV183556564
OOBO01001871
235180
Bacteroidota
CCA
Trp
>WENV183556434
OOBO01000817
80607
Bacteroidota
GTA
Tyr
>WENV183556150
OOBO01000001
80607
Bacteroidota
GTA
Tyr
>WENV183556199
OOBO01000050
412235
Bacteroidota
>WENV183556232
OOBO01000110
344769
Bacteroidota
CTC
Glu
>WENV183556231
OOBO01000110
344769
Bacteroidota
CTC
Glu
>WENV183556318
OOBO01000296
80614
Bacteroidota
>WENV183556437
OOBO01000845
52358
Bacteroidota
TGA
Ser
>WENV183556406
OOBO01000659
52358
Bacteroidota
TGA
Ser
>WENV183556238
OOBO01000128
52358
Bacteroidota
TGA
Ser
>WENV183556404
OOBO01000650
154643
Bacteroidota
CAT
Met
>WENV183556500
OOBO01001317
95559
Bacteroidota
TAG
Leu
>WENV183556304
OOBO01000278
419272
Bacteroidota
CTG
Gln
>WENV183556283
OOBO01000230
144655
Bacteroidota
GGC
Ala
>WENV183556362
OOBO01000447
338164
Bacteroidota
TTC
Glu
>WENV183556510
OOBO01001390
95875
Bacteroidota
TAG
Leu
>WENV183556291
OOBO01000241
338314
Bacteroidota
CCT
Arg
>WENV183556558
OOBO01001821
240012
Bacteroidota
CCC
Gly
>WENV183556156
OOBO01000007
167013
Bacteroidota
TGG
Pro
>WENV183556681
OOBO01004611
44852
Bacteroidota
TAA
Leu
>WENV183556885
OOBO01020083
150485
Bacteroidota
GTT
Asn
>WENV183556504
OOBO01001346
95986
Bacteroidota
GTA
Tyr
>WENV183556293
OOBO01000255
95986
Bacteroidota
GTA
Tyr
>WENV183556606
OOBO01002538
411550
Bacteroidota
CTG
Gln
>WENV183556594
OOBO01002339
50727
Bacteroidota
TGA
Ser
>WENV183556325
OOBO01000316
132360
Bacteroidota
GGG
Pro
>WENV183556179
OOBO01000019
425638
Bacteroidota
CTG
Gln
>WENV183556620
OOBO01002679
425638
Bacteroidota
CTG
Gln
>WENV183556365
OOBO01000464
239647
Bacteroidota
TTT
Lys
>WENV183556486
OOBO01001248
19317
Bacteroidota
GGA
Ser
>WENV183556243
OOBO01000131
353927
Bacteroidota
TTC
Glu
>WENV183556538
OOBO01001630
185921
Bacteroidota
GTC
Asp
>WENV183556613
OOBO01002621
23696
Bacteroidota
GCT
Ser
>WENV183556646
OOBO01003425
412236
Bacteroidota
CCC
Gly
>WENV183556255
OOBO01000161
414426
Bacteroidota
CTG
Gln
>WENV183556234
OOBO01000110
146764
Bacteroidota
GTC
Asp
>WENV183556233
OOBO01000110
146764
Bacteroidota
GTC
Asp
>WENV183556382
OOBO01000538
59498
Bacteroidota
GAG
Leu
>WENV183556388
OOBO01000567
16224
Bacteroidota
GGA
Ser
>WENV183556476
OOBO01001192
151960
Bacteroidota
GGC
Ala
>WENV183556586
OOBO01002188
16220
Bacteroidota
GGA
Ser
>WENV183556338
OOBO01000341
127023
Bacteroidota
GGG
Pro
>WENV183556326
OOBO01000318
338125
Bacteroidota
CCT
Arg
>WENV183556386
OOBO01000544
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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