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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183565042
OOBZ01001532
235097
Bacteroidota
TTT
Lys
>WENV183565868
OOBZ01038478
95987
Bacteroidota
CAA
Leu
>WENV183565593
OOBZ01012899
339412
Bacteroidota
GGT
Thr
>WENV183564910
OOBZ01000822
235102
Bacteroidota
CGT
Thr
>WENV183564678
OOBZ01000134
144657
Bacteroidota
CGG
Pro
>WENV183564743
OOBZ01000270
243025
Bacteroidota
CAT
Met
>WENV183564757
OOBZ01000284
243025
Bacteroidota
CAT
Met
>WENV183565789
OOBZ01029121
339341
Bacteroidota
GGT
Thr
>WENV183565389
OOBZ01006738
46165
Bacteroidota
TGA
Ser
>WENV183565160
OOBZ01002535
17323
Bacteroidota
GGA
Ser
>WENV183565060
OOBZ01001669
17323
Bacteroidota
GGA
Ser
>WENV183564867
OOBZ01000602
17323
Bacteroidota
GGA
Ser
>WENV183565250
OOBZ01003820
338486
Bacteroidota
CAT
Met
>WENV183565002
OOBZ01001248
338486
Bacteroidota
CAT
Met
>WENV183564657
OOBZ01000108
338486
Bacteroidota
CAT
Met
>WENV183565784
OOBZ01028385
413663
Bacteroidota
CTG
Gln
>WENV183565430
OOBZ01008039
413663
Bacteroidota
CTG
Gln
>WENV183565594
OOBZ01012899
237797
Bacteroidota
CCA
Trp
>WENV183565483
OOBZ01009056
59689
Bacteroidota
CAG
Leu
>WENV183565897
OOBZ01044189
141397
Bacteroidota
TAC
Val
>WENV183564909
OOBZ01000819
436206
Bacteroidota
TTG
Gln
>WENV183564793
OOBZ01000349
20893
Bacteroidota
GGA
Ser
>WENV183565479
OOBZ01008941
412479
Bacteroidota
TTG
Gln
>WENV183565390
OOBZ01006738
344692
Bacteroidota
GGT
Thr
>WENV183565120
OOBZ01002149
344692
Bacteroidota
GGT
Thr
>WENV183564738
OOBZ01000231
344692
Bacteroidota
GGT
Thr
>WENV183564715
OOBZ01000183
344692
Bacteroidota
GGT
Thr
>WENV183564662
OOBZ01000115
338124
Bacteroidota
CCG
Arg
>WENV183564722
OOBZ01000202
146800
Bacteroidota
>WENV183565177
OOBZ01002839
168744
Bacteroidota
GTG
His
>WENV183565014
OOBZ01001344
238121
Bacteroidota
CTT
Lys
>WENV183565013
OOBZ01001344
238121
Bacteroidota
CTT
Lys
>WENV183564894
OOBZ01000716
338132
Bacteroidota
GCA
Cys
>WENV183564788
OOBZ01000346
338132
Bacteroidota
GCA
Cys
>WENV183564600
OOBZ01000025
338132
Bacteroidota
GCA
Cys
>WENV183564611
OOBZ01000034
104003
Bacteroidota
TAG
Leu
>WENV183564739
OOBZ01000232
193809
Bacteroidota
CAT
Met
>WENV183565647
OOBZ01015834
37076
Bacteroidota
TAA
Leu
>WENV183564703
OOBZ01000171
37076
Bacteroidota
TAA
Leu
>WENV183564744
OOBZ01000271
58714
Bacteroidota
CAA
Leu
>WENV183565032
OOBZ01001461
301449
Bacteroidota
CGG
Pro
>WENV183565256
OOBZ01003919
144933
Bacteroidota
TCT
Arg
>WENV183565828
OOBZ01034270
144933
Bacteroidota
TCT
Arg
>WENV183565714
OOBZ01021426
303954
Bacteroidota
GCC
Gly
>WENV183565442
OOBZ01008267
144656
Bacteroidota
GTG
His
>WENV183565200
OOBZ01003100
235207
Bacteroidota
CAT
Met
>WENV183564934
OOBZ01000948
235207
Bacteroidota
CAT
Met
>WENV183565239
OOBZ01003657
143169
Bacteroidota
GGG
Pro
>WENV183564829
OOBZ01000481
143169
Bacteroidota
GGG
Pro
>WENV183565234
OOBZ01003544
144596
Bacteroidota
GGC
Ala
>WENV183564639
OOBZ01000090
80607
Bacteroidota
GTA
Tyr
>WENV183565631
OOBZ01015003
80614
Bacteroidota
>WENV183565040
OOBZ01001514
80614
Bacteroidota
>WENV183565798
OOBZ01030741
154643
Bacteroidota
CAT
Met
>WENV183564866
OOBZ01000596
154643
Bacteroidota
CAT
Met
>WENV183564613
OOBZ01000042
154643
Bacteroidota
CAT
Met
>WENV183565824
OOBZ01033425
95559
Bacteroidota
TAG
Leu
>WENV183565350
OOBZ01005537
95559
Bacteroidota
TAG
Leu
>WENV183565756
OOBZ01025582
144655
Bacteroidota
GGC
Ala
>WENV183565982
OOBZ01068411
338164
Bacteroidota
TTC
Glu
>WENV183565116
OOBZ01002096
95875
Bacteroidota
TAG
Leu
>WENV183565262
OOBZ01004080
240012
Bacteroidota
CCC
Gly
>WENV183564628
OOBZ01000052
44852
Bacteroidota
TAA
Leu
>WENV183564634
OOBZ01000071
147439
Bacteroidota
TCT
Arg
>WENV183565783
OOBZ01028271
280513
Bacteroidota
TTT
Lys
>WENV183564918
OOBZ01000848
354570
Bacteroidota
TTC
Glu
>WENV183565133
OOBZ01002199
150485
Bacteroidota
GTT
Asn
>WENV183565132
OOBZ01002199
150485
Bacteroidota
GTT
Asn
>WENV183565484
OOBZ01009119
338165
Bacteroidota
GGT
Thr
>WENV183565857
OOBZ01037046
196394
Bacteroidota
GTC
Asp
>WENV183565289
OOBZ01004572
196394
Bacteroidota
GTC
Asp
>WENV183565235
OOBZ01003582
425638
Bacteroidota
CTG
Gln
>WENV183564974
OOBZ01001175
425638
Bacteroidota
CTG
Gln
>WENV183564885
OOBZ01000682
19317
Bacteroidota
GGA
Ser
>WENV183565113
OOBZ01002062
353927
Bacteroidota
TTC
Glu
>WENV183564915
OOBZ01000844
353927
Bacteroidota
TTC
Glu
>WENV183564674
OOBZ01000127
353927
Bacteroidota
TTC
Glu
>WENV183565118
OOBZ01002127
185921
Bacteroidota
GTC
Asp
>WENV183564741
OOBZ01000246
23696
Bacteroidota
GCT
Ser
>WENV183564821
OOBZ01000452
414426
Bacteroidota
CTG
Gln
>WENV183564820
OOBZ01000452
414426
Bacteroidota
CTG
Gln
>WENV183564745
OOBZ01000273
414426
Bacteroidota
CTG
Gln
>WENV183564654
OOBZ01000105
414426
Bacteroidota
CTG
Gln
>WENV183565199
OOBZ01003100
56823
Bacteroidota
TGA
Ser
>WENV183565158
OOBZ01002477
56823
Bacteroidota
TGA
Ser
>WENV183565026
OOBZ01001449
56823
Bacteroidota
TGA
Ser
>WENV183566014
OOBZ01080555
16224
Bacteroidota
GGA
Ser
>WENV183565033
OOBZ01001478
151960
Bacteroidota
GGC
Ala
>WENV183564660
OOBZ01000112
151960
Bacteroidota
GGC
Ala
>WENV183565629
OOBZ01014726
16220
Bacteroidota
GGA
Ser
>WENV183564653
OOBZ01000102
338125
Bacteroidota
CCT
Arg
>WENV183565147
OOBZ01002386
235129
Bacteroidota
GCC
Gly
>WENV183565145
OOBZ01002386
235129
Bacteroidota
GCC
Gly
>WENV183565297
OOBZ01004877
313363
Bacteroidota
GAA
Phe
>WENV183564984
OOBZ01001219
313363
Bacteroidota
GAA
Phe
>WENV183564929
OOBZ01000899
313363
Bacteroidota
GAA
Phe
>WENV183564661
OOBZ01000114
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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