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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183630893
OOGU01007446
171935
Gammaproteobacteria
ACG
Arg
>WENV183630709
OOGU01000729
148442
Gammaproteobacteria
ACG
Arg
>WENV183631512
OOGU01141939
58822
Gammaproteobacteria
CAA
Leu
>WENV183631506
OOGU01139107
175964
Gammaproteobacteria
CAT
Met
>WENV183630662
OOGU01000189
175964
Gammaproteobacteria
CAT
Met
>WENV183631325
OOGU01079503
281920
Gammaproteobacteria
CCA
Trp
>WENV183630770
OOGU01001863
149036
Gammaproteobacteria
CCA
Trp
>WENV183630724
OOGU01001014
247974
Gammaproteobacteria
CCA
Trp
>WENV183630715
OOGU01000845
419491
Gammaproteobacteria
CTG
Gln
>WENV183630654
OOGU01000113
173040
Gammaproteobacteria
GAC
Val
>WENV183631294
OOGU01070698
412799
Gammaproteobacteria
GCA
Cys
>WENV183630699
OOGU01000637
412799
Gammaproteobacteria
GCA
Cys
>WENV183630683
OOGU01000331
411842
Gammaproteobacteria
GCA
Cys
>WENV183630682
OOGU01000331
270352
Gammaproteobacteria
GCC
Gly
>WENV183631293
OOGU01070698
273942
Gammaproteobacteria
GCC
Gly
>WENV183631122
OOGU01035145
16840
Gammaproteobacteria
GGA
Ser
>WENV183630856
OOGU01004813
248041
Gammaproteobacteria
GGC
Ala
>WENV183631035
OOGU01020156
145367
Gammaproteobacteria
GGG
Pro
>WENV183630793
OOGU01002553
113872
Gammaproteobacteria
GTA
Tyr
>WENV183631502
OOGU01137935
147117
Gammaproteobacteria
GTC
Asp
>WENV183630789
OOGU01002449
236366
Gammaproteobacteria
GTG
His
>WENV183630712
OOGU01000839
147053
Gammaproteobacteria
GTT
Asn
>WENV183630713
OOGU01000839
147053
Gammaproteobacteria
GTT
Asn
>WENV183630700
OOGU01000637
59979
Gammaproteobacteria
TAA
Leu
>WENV183630672
OOGU01000272
237766
Gammaproteobacteria
TAC
Val
>WENV183631468
OOGU01125317
412476
Gammaproteobacteria
TCC
Gly
>WENV183630864
OOGU01005387
10850
Gammaproteobacteria
TGA
Ser
>WENV183630759
OOGU01001660
262546
Gammaproteobacteria
TGC
Ala
>WENV183630754
OOGU01001606
150648
Gammaproteobacteria
TGG
Pro
>WENV183631393
OOGU01098720
240619
Gammaproteobacteria
TGT
Thr
>WENV183631043
OOGU01021530
243485
Gammaproteobacteria
TGT
Thr
>WENV183630982
OOGU01014032
279218
Gammaproteobacteria
TTC
Glu
>WENV183631147
OOGU01041324
241136
Gammaproteobacteria
TTG
Gln
>WENV183631119
OOGU01034632
245770
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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