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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
118 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170891408
MDTD01023477
275457
Gammaproteobacteria
ACG
Arg
>WENV170902445
MDTD01185294
275457
Gammaproteobacteria
ACG
Arg
>WENV170897605
MDTD01114470
779604
Gammaproteobacteria
GCA
Cys
>WENV170899754
MDTD01144164
779604
Gammaproteobacteria
GCA
Cys
>WENV170902083
MDTD01179760
457453
Gammaproteobacteria
TTT
Lys
>WENV170892318
MDTD01036799
271464
Gammaproteobacteria
TGG
Pro
>WENV170895275
MDTD01077250
271464
Gammaproteobacteria
TGG
Pro
>WENV170896518
MDTD01097017
271464
Gammaproteobacteria
TGG
Pro
>WENV170900547
MDTD01155853
271464
Gammaproteobacteria
TGG
Pro
>WENV170902200
MDTD01181550
271464
Gammaproteobacteria
TGG
Pro
>WENV170890280
MDTD01007546
274150
Gammaproteobacteria
CAT
Met
>WENV170891766
MDTD01028861
274150
Gammaproteobacteria
CAT
Met
>WENV170894530
MDTD01066968
274150
Gammaproteobacteria
CAT
Met
>WENV170894784
MDTD01070540
656944
Gammaproteobacteria
CCT
Arg
>WENV170890017
MDTD01003769
284350
Gammaproteobacteria
TCT
Arg
>WENV170898570
MDTD01128095
453181
Gammaproteobacteria
GTG
His
>WENV170890164
MDTD01005669
274166
Gammaproteobacteria
GAC
Val
>WENV170893415
MDTD01051229
474520
Gammaproteobacteria
CCA
Trp
>WENV170893739
MDTD01055929
270982
Gammaproteobacteria
GAT
Ile
>WENV170895489
MDTD01080075
278942
Gammaproteobacteria
CCG
Arg
>WENV170891289
MDTD01022070
467367
Gammaproteobacteria
GGT
Thr
>WENV170902758
MDTD01190798
456706
Gammaproteobacteria
TGT
Thr
>WENV170895809
MDTD01085491
456247
Gammaproteobacteria
CCA
Trp
>WENV170891117
MDTD01019524
275003
Gammaproteobacteria
CAT
Met
>WENV170893376
MDTD01050868
458351
Gammaproteobacteria
TTG
Gln
>WENV170895538
MDTD01081002
458351
Gammaproteobacteria
TTG
Gln
>WENV170897834
MDTD01117690
452413
Gammaproteobacteria
GGC
Ala
>WENV170893465
MDTD01052086
463383
Gammaproteobacteria
CCA
Trp
>WENV170897028
MDTD01105025
86880
Gammaproteobacteria
GGA
Ser
>WENV170891894
MDTD01030757
30865
Gammaproteobacteria
GCT
Ser
>WENV170900302
MDTD01152343
276971
Gammaproteobacteria
ACG
Arg
>WENV170900627
MDTD01157117
276971
Gammaproteobacteria
ACG
Arg
>WENV170892440
MDTD01038273
276976
Gammaproteobacteria
TCT
Arg
>WENV170898569
MDTD01128095
276976
Gammaproteobacteria
TCT
Arg
>WENV170891112
MDTD01019460
452416
Gammaproteobacteria
TTT
Lys
>WENV170897579
MDTD01113973
464809
Gammaproteobacteria
GAA
Phe
>WENV170901481
MDTD01171180
464809
Gammaproteobacteria
GAA
Phe
>WENV170893377
MDTD01050868
276973
Gammaproteobacteria
GAC
Val
>WENV170893871
MDTD01057523
276973
Gammaproteobacteria
GAC
Val
>WENV170895493
MDTD01080138
276973
Gammaproteobacteria
GAC
Val
>WENV170903016
MDTD01195327
276973
Gammaproteobacteria
GAC
Val
>WENV170901068
MDTD01164247
452332
Gammaproteobacteria
GTG
His
>WENV170893811
MDTD01056771
271287
Gammaproteobacteria
CAT
Met
>WENV170889796
MDTD01000912
282413
Gammaproteobacteria
ACG
Arg
>WENV170894596
MDTD01068019
282413
Gammaproteobacteria
ACG
Arg
>WENV170894774
MDTD01070436
46215
Gammaproteobacteria
GCT
Ser
>WENV170898474
MDTD01126634
278982
Gammaproteobacteria
CCG
Arg
>WENV170898656
MDTD01129414
278982
Gammaproteobacteria
CCG
Arg
>WENV170898797
MDTD01131286
278982
Gammaproteobacteria
CCG
Arg
>WENV170897493
MDTD01112421
452412
Gammaproteobacteria
GCC
Gly
>WENV170897829
MDTD01117632
452412
Gammaproteobacteria
GCC
Gly
>WENV170899753
MDTD01144164
452412
Gammaproteobacteria
GCC
Gly
>WENV170892574
MDTD01039827
460378
Gammaproteobacteria
TAC
Val
>WENV170899499
MDTD01140683
460378
Gammaproteobacteria
TAC
Val
>WENV170902105
MDTD01180051
460378
Gammaproteobacteria
TAC
Val
>WENV170899071
MDTD01134838
451876
Gammaproteobacteria
GTG
His
>WENV170901045
MDTD01163899
780765
Gammaproteobacteria
CCC
Gly
>WENV170902898
MDTD01193141
780765
Gammaproteobacteria
CCC
Gly
>WENV170893838
MDTD01057038
271460
Gammaproteobacteria
CGG
Pro
>WENV170895869
MDTD01086459
456510
Gammaproteobacteria
GGC
Ala
>WENV170890166
MDTD01005786
452404
Gammaproteobacteria
TGT
Thr
>WENV170891906
MDTD01030985
113737
Gammaproteobacteria
CAA
Leu
>WENV170894448
MDTD01065802
275658
Gammaproteobacteria
TGG
Pro
>WENV170895206
MDTD01076391
275658
Gammaproteobacteria
TGG
Pro
>WENV170902135
MDTD01180528
275658
Gammaproteobacteria
TGG
Pro
>WENV170895553
MDTD01081282
271459
Gammaproteobacteria
CCT
Arg
>WENV170901176
MDTD01166089
301313
Gammaproteobacteria
TGG
Pro
>WENV170900524
MDTD01155530
179999
Gammaproteobacteria
CAA
Leu
>WENV170902927
MDTD01193706
271200
Gammaproteobacteria
CAT
Met
>WENV170889806
MDTD01001110
271456
Gammaproteobacteria
ACG
Arg
>WENV170889807
MDTD01001110
271456
Gammaproteobacteria
ACG
Arg
>WENV170896969
MDTD01103742
271456
Gammaproteobacteria
ACG
Arg
>WENV170897254
MDTD01108414
271456
Gammaproteobacteria
ACG
Arg
>WENV170890738
MDTD01014317
273754
Gammaproteobacteria
GTT
Asn
>WENV170897511
MDTD01112637
273754
Gammaproteobacteria
GTT
Asn
>WENV170897512
MDTD01112637
273754
Gammaproteobacteria
GTT
Asn
>WENV170901900
MDTD01177509
273754
Gammaproteobacteria
GTT
Asn
>WENV170902220
MDTD01181837
273754
Gammaproteobacteria
GTT
Asn
>WENV170902221
MDTD01181837
273754
Gammaproteobacteria
GTT
Asn
>WENV170890805
MDTD01015110
459731
Gammaproteobacteria
GGT
Thr
>WENV170902834
MDTD01192110
113485
Gammaproteobacteria
CAA
Leu
>WENV170893249
MDTD01049949
780241
Gammaproteobacteria
GCA
Cys
>WENV170903291
MDTD01199439
452881
Gammaproteobacteria
TGT
Thr
>WENV170891748
MDTD01028673
86900
Gammaproteobacteria
TGA
Ser
>WENV170903388
MDTD01201022
459479
Gammaproteobacteria
TTC
Glu
>WENV170899171
MDTD01136036
271613
Gammaproteobacteria
GTC
Asp
>WENV170901997
MDTD01178853
271613
Gammaproteobacteria
GTC
Asp
>WENV170892390
MDTD01037638
112371
Gammaproteobacteria
CAA
Leu
>WENV170891332
MDTD01022485
276972
Gammaproteobacteria
CCA
Trp
>WENV170892860
MDTD01043840
276972
Gammaproteobacteria
CCA
Trp
>WENV170895565
MDTD01081535
276972
Gammaproteobacteria
CCA
Trp
>WENV170897811
MDTD01117500
276972
Gammaproteobacteria
CCA
Trp
>WENV170901469
MDTD01171009
276972
Gammaproteobacteria
CCA
Trp
>WENV170895391
MDTD01078735
271286
Gammaproteobacteria
CAT
Met
>WENV170895539
MDTD01081002
271286
Gammaproteobacteria
CAT
Met
>WENV170897227
MDTD01107942
453897
Gammaproteobacteria
TAC
Val
>WENV170899514
MDTD01140919
453897
Gammaproteobacteria
TAC
Val
>WENV170898571
MDTD01128095
181084
Gammaproteobacteria
TAG
Leu
>WENV170890802
MDTD01015110
454397
Gammaproteobacteria
TGT
Thr
>WENV170894308
MDTD01063623
454397
Gammaproteobacteria
TGT
Thr
>WENV170892392
MDTD01037638
452414
Gammaproteobacteria
TTC
Glu
>WENV170897835
MDTD01117690
452414
Gammaproteobacteria
TTC
Glu
>WENV170891233
MDTD01021153
276970
Gammaproteobacteria
CCG
Arg
>WENV170902857
MDTD01192521
276975
Gammaproteobacteria
TGG
Pro
>WENV170894511
MDTD01066685
276975
Gammaproteobacteria
TGG
Pro
>WENV170898568
MDTD01128095
276975
Gammaproteobacteria
TGG
Pro
>WENV170898572
MDTD01128095
276975
Gammaproteobacteria
TGG
Pro
>WENV170891750
MDTD01028673
779494
Gammaproteobacteria
GCA
Cys
>WENV170903040
MDTD01195799
459406
Gammaproteobacteria
TAC
Val
>WENV170890167
MDTD01005786
184132
Gammaproteobacteria
GTA
Tyr
>WENV170894342
MDTD01063970
276372
Gammaproteobacteria
ACG
Arg
>WENV170895889
MDTD01086727
276372
Gammaproteobacteria
ACG
Arg
>WENV170890503
MDTD01010907
30792
Gammaproteobacteria
GGA
Ser
>WENV170901484
MDTD01171271
30792
Gammaproteobacteria
GGA
Ser
>WENV170900154
MDTD01149979
273328
Gammaproteobacteria
GAC
Val
>WENV170896986
MDTD01103993
452407
Gammaproteobacteria
GAA
Phe
>WENV170902800
MDTD01191612
274093
Gammaproteobacteria
GTC
Asp
>WENV170900626
MDTD01157117
20134
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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