This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1014687
SRR023845.263639
275633
Bacteroidota
CAT
Met
>SRA1014276
SRR023845.68048
153743
Bacteroidota
GTA
Tyr
>SRA1014739
SRR023845.291170
153743
Bacteroidota
GTA
Tyr
>SRA1015072
SRR023845.448261
456861
Bacteroidota
CCC
Gly
>SRA1015119
SRR023845.466722
456861
Bacteroidota
CCC
Gly
>SRA1015128
SRR023845.470498
456861
Bacteroidota
CCC
Gly
>SRA1014545
SRR023845.192877
180050
Bacteroidota
TAG
Leu
>SRA1015143
SRR023845.476809
180050
Bacteroidota
TAG
Leu
>SRA1014178
SRR023845.29244
456863
Bacteroidota
GCC
Gly
>SRA1014682
SRR023845.261094
456865
Bacteroidota
TTG
Gln
>SRA1014908
SRR023845.375845
456865
Bacteroidota
TTG
Gln
>SRA1014971
SRR023845.403438
271135
Bacteroidota
GTC
Asp
>SRA1015217
SRR023845.502732
186425
Bacteroidota
CAG
Leu
>SRA1014809
SRR023845.322740
275810
Bacteroidota
TCT
Arg
>SRA1014466
SRR023845.151371
271143
Bacteroidota
TGC
Ala
>SRA1014616
SRR023845.228815
271143
Bacteroidota
TGC
Ala
>SRA1014617
SRR023845.228920
275630
Bacteroidota
GGC
Ala
>SRA1014199
SRR023845.36176
112338
Bacteroidota
TGT
Thr
>SRA1014993
SRR023845.416425
275629
Bacteroidota
GTT
Asn
>SRA1014994
SRR023845.416432
240638
Bacteroidota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK