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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1032581
SRR035088.53787
272734
Chlorobiota
CAT
Met
>SRA1032746
SRR035088.93400
272734
Chlorobiota
CAT
Met
>SRA1033281
SRR035088.213415
272734
Chlorobiota
CAT
Met
>SRA1033460
SRR035088.263752
272734
Chlorobiota
CAT
Met
>SRA1033823
SRR035088.366605
272734
Chlorobiota
CAT
Met
>SRA1032914
SRR035088.128587
452251
Chlorobiota
CAT
Met
>SRA1033011
SRR035088.151289
452251
Chlorobiota
CAT
Met
>SRA1032613
SRR035088.63599
271198
Chlorobiota
CAT
Met
>SRA1032675
SRR035088.76946
271198
Chlorobiota
CAT
Met
>SRA1032853
SRR035088.115744
271198
Chlorobiota
CAT
Met
>SRA1033005
SRR035088.150474
271198
Chlorobiota
CAT
Met
>SRA1033672
SRR035088.319297
271198
Chlorobiota
CAT
Met
>SRA1034101
SRR035088.487092
271198
Chlorobiota
CAT
Met
>SRA1032605
SRR035088.61014
453381
Chlorobiota
CCA
Trp
>SRA1032627
SRR035088.66700
453381
Chlorobiota
CCA
Trp
>SRA1033140
SRR035088.181604
453381
Chlorobiota
CCA
Trp
>SRA1033381
SRR035088.240934
453381
Chlorobiota
CCA
Trp
>SRA1032660
SRR035088.74569
453695
Chlorobiota
CCC
Gly
>SRA1032921
SRR035088.129455
453695
Chlorobiota
CCC
Gly
>SRA1033461
SRR035088.263752
453695
Chlorobiota
CCC
Gly
>SRA1032641
SRR035088.70061
453583
Chlorobiota
CGC
Ala
>SRA1032710
SRR035088.85309
453583
Chlorobiota
CGC
Ala
>SRA1032780
SRR035088.102307
453583
Chlorobiota
CGC
Ala
>SRA1033092
SRR035088.171211
453583
Chlorobiota
CGC
Ala
>SRA1033455
SRR035088.262285
453583
Chlorobiota
CGC
Ala
>SRA1033645
SRR035088.311311
453583
Chlorobiota
CGC
Ala
>SRA1032439
SRR035088.11044
272771
Chlorobiota
GAT
Ile
>SRA1033218
SRR035088.198836
272771
Chlorobiota
GAT
Ile
>SRA1033296
SRR035088.217448
272771
Chlorobiota
GAT
Ile
>SRA1032833
SRR035088.111646
456494
Chlorobiota
GGC
Ala
>SRA1033020
SRR035088.153038
456494
Chlorobiota
GGC
Ala
>SRA1033631
SRR035088.308389
456494
Chlorobiota
GGC
Ala
>SRA1032787
SRR035088.103157
272557
Chlorobiota
GGG
Pro
>SRA1032989
SRR035088.145383
272557
Chlorobiota
GGG
Pro
>SRA1033469
SRR035088.266911
272557
Chlorobiota
GGG
Pro
>SRA1033735
SRR035088.340195
272557
Chlorobiota
GGG
Pro
>SRA1033774
SRR035088.350936
272557
Chlorobiota
GGG
Pro
>SRA1033996
SRR035088.438391
272557
Chlorobiota
GGG
Pro
>SRA1032562
SRR035088.47530
453380
Chlorobiota
GGT
Thr
>SRA1032626
SRR035088.66700
453380
Chlorobiota
GGT
Thr
>SRA1032721
SRR035088.86779
453380
Chlorobiota
GGT
Thr
>SRA1032863
SRR035088.118389
453380
Chlorobiota
GGT
Thr
>SRA1033010
SRR035088.151199
453380
Chlorobiota
GGT
Thr
>SRA1032437
SRR035088.9911
272483
Chlorobiota
GTG
His
>SRA1032846
SRR035088.113989
272483
Chlorobiota
GTG
His
>SRA1033204
SRR035088.196259
272483
Chlorobiota
GTG
His
>SRA1033361
SRR035088.234789
272483
Chlorobiota
GTG
His
>SRA1034094
SRR035088.484115
272483
Chlorobiota
GTG
His
>SRA1032491
SRR035088.25517
453483
Chlorobiota
TGG
Pro
>SRA1032549
SRR035088.44577
453483
Chlorobiota
TGG
Pro
>SRA1033202
SRR035088.196259
453483
Chlorobiota
TGG
Pro
>SRA1033298
SRR035088.218076
453483
Chlorobiota
TGG
Pro
>SRA1033701
SRR035088.329344
453483
Chlorobiota
TGG
Pro
>SRA1032719
SRR035088.86779
453379
Chlorobiota
TGT
Thr
>SRA1032992
SRR035088.146051
453379
Chlorobiota
TGT
Thr
>SRA1033008
SRR035088.151199
453379
Chlorobiota
TGT
Thr
>SRA1033183
SRR035088.191960
453379
Chlorobiota
TGT
Thr
>SRA1033432
SRR035088.256733
453379
Chlorobiota
TGT
Thr
>SRA1033864
SRR035088.384471
453379
Chlorobiota
TGT
Thr
>SRA1033914
SRR035088.405831
453379
Chlorobiota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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