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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1045699
SRR035093.152458
271198
Chlorobiota
CAT
Met
>SRA1045809
SRR035093.173783
272734
Chlorobiota
CAT
Met
>SRA1045810
SRR035093.173783
453695
Chlorobiota
CCC
Gly
>SRA1045866
SRR035093.184261
271198
Chlorobiota
CAT
Met
>SRA1045876
SRR035093.186126
453583
Chlorobiota
CGC
Ala
>SRA1046022
SRR035093.217743
272483
Chlorobiota
GTG
His
>SRA1046024
SRR035093.218587
453583
Chlorobiota
CGC
Ala
>SRA1046051
SRR035093.224300
453379
Chlorobiota
TGT
Thr
>SRA1046076
SRR035093.230868
453583
Chlorobiota
CGC
Ala
>SRA1046202
SRR035093.253138
453380
Chlorobiota
GGT
Thr
>SRA1046203
SRR035093.253138
453381
Chlorobiota
CCA
Trp
>SRA1046200
SRR035093.253138
453379
Chlorobiota
TGT
Thr
>SRA1046211
SRR035093.253838
272483
Chlorobiota
GTG
His
>SRA1045215
SRR035093.32691
453695
Chlorobiota
CCC
Gly
>SRA1046580
SRR035093.336421
453583
Chlorobiota
CGC
Ala
>SRA1046636
SRR035093.349835
453379
Chlorobiota
TGT
Thr
>SRA1045244
SRR035093.40650
272771
Chlorobiota
GAT
Ile
>SRA1046927
SRR035093.419966
453583
Chlorobiota
CGC
Ala
>SRA1046940
SRR035093.422977
453483
Chlorobiota
TGG
Pro
>SRA1046978
SRR035093.429532
272483
Chlorobiota
GTG
His
>SRA1046989
SRR035093.430227
453695
Chlorobiota
CCC
Gly
>SRA1047108
SRR035093.458513
272771
Chlorobiota
GAT
Ile
>SRA1047138
SRR035093.464122
453583
Chlorobiota
CGC
Ala
>SRA1047235
SRR035093.491100
272557
Chlorobiota
GGG
Pro
>SRA1047311
SRR035093.507441
453380
Chlorobiota
GGT
Thr
>SRA1047312
SRR035093.507441
453381
Chlorobiota
CCA
Trp
>SRA1047407
SRR035093.531693
452251
Chlorobiota
CAT
Met
>SRA1047507
SRR035093.560476
456494
Chlorobiota
GGC
Ala
>SRA1047518
SRR035093.564664
272734
Chlorobiota
CAT
Met
>SRA1047519
SRR035093.564664
453695
Chlorobiota
CCC
Gly
>SRA1047564
SRR035093.580943
272734
Chlorobiota
CAT
Met
>SRA1047565
SRR035093.580943
453695
Chlorobiota
CCC
Gly
>SRA1045413
SRR035093.88361
456494
Chlorobiota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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