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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
74 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV081875
BAAU01002706
261473
Bacillota
CTT
Lys
>WENV081781
BAAU01000429
257966
Bacillota
CCA
Trp
>WENV081896
BAAU01003345
258855
Bacillota
CTT
Lys
>WENV082124
BAAU01022408
257969
Bacillota
TAC
Val
>WENV081780
BAAU01000429
159235
Bacillota
GTC
Asp
>WENV081920
BAAU01004300
159235
Bacillota
GTC
Asp
>WENV081918
BAAU01004300
257968
Bacillota
GCC
Gly
>WENV082125
BAAU01022408
257968
Bacillota
GCC
Gly
>WENV082099
BAAU01020916
88717
Bacillota
GTA
Tyr
>WENV081893
BAAU01003324
369809
Bacillota
CTC
Glu
>WENV081894
BAAU01003324
265644
Bacillota
CTT
Lys
>WENV082031
BAAU01011299
265644
Bacillota
CTT
Lys
>WENV081919
BAAU01004300
257970
Bacillota
GAA
Phe
>WENV082122
BAAU01022408
257970
Bacillota
GAA
Phe
>WENV081905
BAAU01003608
159242
Bacillota
CCG
Arg
>WENV081946
BAAU01005923
159242
Bacillota
CCG
Arg
>WENV082064
BAAU01015054
159242
Bacillota
CCG
Arg
>WENV082073
BAAU01016740
258854
Bacillota
TGC
Ala
>WENV081879
BAAU01002929
163173
Bacillota
GTC
Asp
>WENV082103
BAAU01021158
163173
Bacillota
GTC
Asp
>WENV081809
BAAU01000673
159234
Bacillota
CAC
Val
>WENV082160
BAAU01026765
159234
Bacillota
CAC
Val
>WENV082149
BAAU01025663
448208
Bacillota
TCC
Gly
>WENV081978
BAAU01007936
49778
Bacillota
AAG
Leu
>WENV081863
BAAU01002371
159433
Bacillota
GAT
Ile
>WENV082132
BAAU01022948
106802
Bacillota
GTA
Tyr
>WENV081972
BAAU01007302
159237
Bacillota
TCT
Arg
>WENV081988
BAAU01008850
159237
Bacillota
TCT
Arg
>WENV081826
BAAU01001052
257977
Bacillota
CGT
Thr
>WENV082110
BAAU01021330
371882
Bacillota
TTC
Glu
>WENV082045
BAAU01012355
261284
Bacillota
CTT
Lys
>WENV081930
BAAU01004818
261489
Bacillota
TGC
Ala
>WENV081983
BAAU01008564
64857
Bacillota
TAA
Leu
>WENV082146
BAAU01024890
41269
Bacillota
TGA
Ser
>WENV081966
BAAU01006657
369282
Bacillota
CCT
Arg
>WENV081839
BAAU01001406
166292
Bacillota
GAT
Ile
>WENV081859
BAAU01002352
371396
Bacillota
GCC
Gly
>WENV082017
BAAU01010484
11993
Bacillota
GGA
Ser
>WENV081878
BAAU01002894
131055
Bacillota
TAG
Leu
>WENV081942
BAAU01005606
258126
Bacillota
GCC
Gly
>WENV082116
BAAU01021729
258126
Bacillota
GCC
Gly
>WENV082101
BAAU01021154
369773
Bacillota
TTC
Glu
>WENV082109
BAAU01021330
262085
Bacillota
TAC
Val
>WENV081892
BAAU01003324
265643
Bacillota
GTT
Asn
>WENV081830
BAAU01001138
159344
Bacillota
>WENV081831
BAAU01001138
5393
Bacillota
GCT
Ser
>WENV081909
BAAU01003925
448256
Bacillota
TTG
Gln
>WENV081840
BAAU01001406
258604
Bacillota
TGC
Ala
>WENV081843
BAAU01001598
257960
Bacillota
CGC
Ala
>WENV081862
BAAU01002352
162668
Bacillota
GTG
His
>WENV082063
BAAU01015046
18326
Bacillota
CGA
Ser
>WENV081743
BAAU01000009
258102
Bacillota
TGC
Ala
>WENV082018
BAAU01010502
160477
Bacillota
GTC
Asp
>WENV082123
BAAU01022408
160477
Bacillota
GTC
Asp
>WENV081914
BAAU01004113
166295
Bacillota
GTT
Asn
>WENV081899
BAAU01003490
163172
Bacillota
CCT
Arg
>WENV082100
BAAU01021154
369280
Bacillota
GTT
Asn
>WENV081787
BAAU01000454
162489
Bacillota
GTC
Asp
>WENV082147
BAAU01024914
265662
Bacillota
GGT
Thr
>WENV082019
BAAU01010502
265650
Bacillota
GGT
Thr
>WENV082170
BAAU01027962
369521
Bacillota
CTC
Glu
>WENV082102
BAAU01021154
448339
Bacillota
GCA
Cys
>WENV082043
BAAU01012273
159236
Bacillota
GTT
Asn
>WENV081968
BAAU01006939
257976
Bacillota
CCC
Gly
>WENV081931
BAAU01004818
162486
Bacillota
GAT
Ile
>WENV081744
BAAU01000009
159345
Bacillota
GAT
Ile
>WENV082133
BAAU01022948
258131
Bacillota
TGT
Thr
>WENV082165
BAAU01027364
159063
Bacillota
CGG
Pro
>WENV082096
BAAU01020694
257965
Bacillota
TGG
Pro
>WENV081773
BAAU01000404
64855
Bacillota
CAG
Leu
>WENV081898
BAAU01003369
64855
Bacillota
CAG
Leu
>WENV082077
BAAU01016884
159070
Bacillota
GTG
His
>WENV081973
BAAU01007302
159238
Bacillota
GTG
His
>WENV081819
BAAU01000861
369391
Bacillota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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