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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV081744
BAAU01000009
144577
Bacillota
GAT
Ile
>WENV081743
BAAU01000009
235087
Bacillota
TGC
Ala
>WENV081745
BAAU01000010
338149
Bacillota
CTC
Glu
>WENV081746
BAAU01000010
272992
Bacillota
CTT
Lys
>WENV081760
BAAU01000177
144583
Bacillota
ACG
Arg
>WENV081773
BAAU01000404
58712
Bacillota
CAG
Leu
>WENV081780
BAAU01000429
196621
Bacillota
GTC
Asp
>WENV081779
BAAU01000429
235095
Bacillota
GGT
Thr
>WENV081781
BAAU01000429
235171
Bacillota
CCA
Trp
>WENV081784
BAAU01000454
267649
Bacillota
TAC
Val
>WENV081783
BAAU01000454
162445
Bacillota
CAT
Met
>WENV081787
BAAU01000454
144652
Bacillota
GTC
Asp
>WENV081807
BAAU01000640
307003
Bacillota
TGC
Ala
>WENV081808
BAAU01000670
309417
Bacillota
GGC
Ala
>WENV081809
BAAU01000673
144594
Bacillota
CAC
Val
>WENV081811
BAAU01000738
338149
Bacillota
CTC
Glu
>WENV081814
BAAU01000807
338149
Bacillota
CTC
Glu
>WENV081815
BAAU01000807
272992
Bacillota
CTT
Lys
>WENV081831
BAAU01001138
4624
Bacillota
GCT
Ser
>WENV081849
BAAU01001722
272992
Bacillota
CTT
Lys
>WENV081852
BAAU01001937
235098
Bacillota
GAC
Val
>WENV081875
BAAU01002706
238910
Bacillota
CTT
Lys
>WENV081879
BAAU01002929
152497
Bacillota
GTC
Asp
>WENV081889
BAAU01003132
158247
Bacillota
>WENV081898
BAAU01003369
58712
Bacillota
CAG
Leu
>WENV081899
BAAU01003490
152018
Bacillota
CCT
Arg
>WENV081905
BAAU01003608
148188
Bacillota
CCG
Arg
>WENV081909
BAAU01003925
411549
Bacillota
TTG
Gln
>WENV081920
BAAU01004300
196621
Bacillota
GTC
Asp
>WENV081918
BAAU01004300
304022
Bacillota
GCC
Gly
>WENV081919
BAAU01004300
235079
Bacillota
GAA
Phe
>WENV081926
BAAU01004648
235137
Bacillota
TGC
Ala
>WENV081929
BAAU01004710
235137
Bacillota
TGC
Ala
>WENV081944
BAAU01005851
235137
Bacillota
TGC
Ala
>WENV081946
BAAU01005923
148188
Bacillota
CCG
Arg
>WENV081951
BAAU01006353
144668
Bacillota
GTC
Asp
>WENV081956
BAAU01006353
313454
Bacillota
GAA
Phe
>WENV081968
BAAU01006939
245296
Bacillota
CCC
Gly
>WENV081972
BAAU01007302
144612
Bacillota
TCT
Arg
>WENV081986
BAAU01008593
272992
Bacillota
CTT
Lys
>WENV081988
BAAU01008850
144612
Bacillota
TCT
Arg
>WENV082012
BAAU01010143
144583
Bacillota
ACG
Arg
>WENV082017
BAAU01010484
11034
Bacillota
GGA
Ser
>WENV082031
BAAU01011299
238910
Bacillota
CTT
Lys
>WENV082034
BAAU01011324
235095
Bacillota
GGT
Thr
>WENV082035
BAAU01011325
144583
Bacillota
ACG
Arg
>WENV082043
BAAU01012273
144621
Bacillota
GTT
Asn
>WENV082064
BAAU01015054
148188
Bacillota
CCG
Arg
>WENV082076
BAAU01016884
144672
Bacillota
TCT
Arg
>WENV082096
BAAU01020694
235124
Bacillota
TGG
Pro
>WENV082099
BAAU01020916
80612
Bacillota
GTA
Tyr
>WENV082102
BAAU01021154
412387
Bacillota
GCA
Cys
>WENV082103
BAAU01021158
152497
Bacillota
GTC
Asp
>WENV082116
BAAU01021729
271471
Bacillota
GCC
Gly
>WENV082114
BAAU01021729
263765
Bacillota
TAC
Val
>WENV082121
BAAU01022321
238857
Bacillota
CCA
Trp
>WENV082125
BAAU01022408
304022
Bacillota
GCC
Gly
>WENV082124
BAAU01022408
235117
Bacillota
TAC
Val
>WENV082122
BAAU01022408
235079
Bacillota
GAA
Phe
>WENV082146
BAAU01024890
37071
Bacillota
TGA
Ser
>WENV082147
BAAU01024914
243098
Bacillota
GGT
Thr
>WENV082160
BAAU01026765
144594
Bacillota
CAC
Val
>WENV082170
BAAU01027962
338147
Bacillota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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