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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV085685
BABD01005669
44859
Bacillota
AAG
Leu
>WENV085605
BABD01002067
144583
Bacillota
ACG
Arg
>WENV085580
BABD01001344
148188
Bacillota
CCG
Arg
>WENV085915
BABD01032810
338149
Bacillota
CTC
Glu
>WENV085522
BABD01000488
338149
Bacillota
CTC
Glu
>WENV085630
BABD01003115
235142
Bacillota
CTT
Lys
>WENV085590
BABD01001592
235142
Bacillota
CTT
Lys
>WENV085563
BABD01000827
272992
Bacillota
CTT
Lys
>WENV085523
BABD01000488
272992
Bacillota
CTT
Lys
>WENV085609
BABD01002180
235079
Bacillota
GAA
Phe
>WENV085533
BABD01000578
235113
Bacillota
GAA
Phe
>WENV085691
BABD01006366
144577
Bacillota
GAT
Ile
>WENV085767
BABD01010209
144577
Bacillota
GAT
Ile
>WENV085876
BABD01024301
173314
Bacillota
GAT
Ile
>WENV085654
BABD01003866
173314
Bacillota
GAT
Ile
>WENV085769
BABD01010432
271471
Bacillota
GCC
Gly
>WENV085737
BABD01009285
240017
Bacillota
GCC
Gly
>WENV085610
BABD01002180
249259
Bacillota
GCC
Gly
>WENV085828
BABD01018074
4624
Bacillota
GCT
Ser
>WENV085757
BABD01009909
11034
Bacillota
GGA
Ser
>WENV085631
BABD01003141
235095
Bacillota
GGT
Thr
>WENV085948
BABD01036832
100326
Bacillota
GTA
Tyr
>WENV085799
BABD01014344
100326
Bacillota
GTA
Tyr
>WENV085676
BABD01005360
80612
Bacillota
GTA
Tyr
>WENV085571
BABD01001008
95563
Bacillota
GTA
Tyr
>WENV085535
BABD01000578
95563
Bacillota
GTA
Tyr
>WENV085940
BABD01036226
144610
Bacillota
GTG
His
>WENV085765
BABD01010126
144621
Bacillota
GTT
Asn
>WENV085632
BABD01003199
267649
Bacillota
TAC
Val
>WENV085729
BABD01008973
144612
Bacillota
TCT
Arg
>WENV085827
BABD01018074
44854
Bacillota
TGA
Ser
>WENV085704
BABD01006983
37269
Bacillota
TGA
Ser
>WENV085766
BABD01010209
235087
Bacillota
TGC
Ala
>WENV085692
BABD01006366
235087
Bacillota
TGC
Ala
>WENV085808
BABD01015137
247734
Bacillota
TGC
Ala
>WENV085653
BABD01003866
273862
Bacillota
TGC
Ala
>WENV085931
BABD01035588
235124
Bacillota
TGG
Pro
>WENV085711
BABD01007524
340263
Bacillota
TTC
Glu
>WENV085811
BABD01015560
338128
Bacillota
TTC
Glu
>WENV085532
BABD01000578
235114
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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