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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
107 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170057953
CDZG01057931
26247
Bacteroidota
CGA
Ser
>WENV170058134
CDZG01063905
166871
Bacteroidota
TCT
Arg
>WENV170056477
CDZG01002862
369487
Bacteroidota
>WENV170057719
CDZG01048220
236813
Bacteroidota
GTC
Asp
>WENV170056529
CDZG01006420
478101
Bacteroidota
CTG
Gln
>WENV170056530
CDZG01006420
478101
Bacteroidota
CTG
Gln
>WENV170056531
CDZG01006420
478101
Bacteroidota
CTG
Gln
>WENV170056532
CDZG01006420
478101
Bacteroidota
CTG
Gln
>WENV170057740
CDZG01048919
300555
Bacteroidota
CCA
Trp
>WENV170057193
CDZG01028705
258780
Bacteroidota
>WENV170057577
CDZG01043031
159421
Bacteroidota
GTG
His
>WENV170057578
CDZG01043031
159421
Bacteroidota
GTG
His
>WENV170057579
CDZG01043031
159421
Bacteroidota
GTG
His
>WENV170057580
CDZG01043031
159421
Bacteroidota
GTG
His
>WENV170056938
CDZG01020725
272161
Bacteroidota
CGT
Thr
>WENV170057601
CDZG01043579
272161
Bacteroidota
CGT
Thr
>WENV170057779
CDZG01050578
272161
Bacteroidota
CGT
Thr
>WENV170057429
CDZG01038414
65110
Bacteroidota
CAG
Leu
>WENV170058179
CDZG01065569
65110
Bacteroidota
CAG
Leu
>WENV170057061
CDZG01025132
258208
Bacteroidota
TTT
Lys
>WENV170057810
CDZG01052113
258208
Bacteroidota
TTT
Lys
>WENV170056538
CDZG01006432
182139
Bacteroidota
CGG
Pro
>WENV170057519
CDZG01040744
139254
Bacteroidota
GAC
Val
>WENV170057802
CDZG01051914
259292
Bacteroidota
CGT
Thr
>WENV170056834
CDZG01016778
76307
Bacteroidota
GAG
Leu
>WENV170057270
CDZG01031943
101772
Bacteroidota
GTA
Tyr
>WENV170056945
CDZG01020926
50713
Bacteroidota
TGA
Ser
>WENV170056744
CDZG01014159
452097
Bacteroidota
CTG
Gln
>WENV170056912
CDZG01019369
452097
Bacteroidota
CTG
Gln
>WENV170057796
CDZG01051555
159918
Bacteroidota
GTG
His
>WENV170057799
CDZG01051594
153591
Bacteroidota
TGG
Pro
>WENV170056924
CDZG01019984
120345
Bacteroidota
TAG
Leu
>WENV170057590
CDZG01043264
238847
Bacteroidota
GGC
Ala
>WENV170056422
CDZG01000878
370133
Bacteroidota
CCG
Arg
>WENV170058142
CDZG01064475
105932
Bacteroidota
TAG
Leu
>WENV170057531
CDZG01041129
105470
Bacteroidota
TAG
Leu
>WENV170056644
CDZG01009187
236821
Bacteroidota
>WENV170057165
CDZG01027792
236821
Bacteroidota
>WENV170057511
CDZG01040534
236821
Bacteroidota
>WENV170058148
CDZG01064489
52815
Bacteroidota
TAA
Leu
>WENV170057074
CDZG01025632
116055
Bacteroidota
CAA
Leu
>WENV170057046
CDZG01024168
259289
Bacteroidota
CTC
Glu
>WENV170057390
CDZG01036842
24628
Bacteroidota
GGA
Ser
>WENV170057430
CDZG01038414
71334
Bacteroidota
GAG
Leu
>WENV170056612
CDZG01008155
22799
Bacteroidota
GGA
Ser
>WENV170058076
CDZG01062817
159953
Bacteroidota
CAT
Met
>WENV170058077
CDZG01062817
159953
Bacteroidota
CAT
Met
>WENV170057718
CDZG01048021
20980
Bacteroidota
GGA
Ser
>WENV170056416
CDZG01000617
83854
Bacteroidota
GAG
Leu
>WENV170056418
CDZG01000617
83854
Bacteroidota
GAG
Leu
>WENV170056420
CDZG01000617
83854
Bacteroidota
GAG
Leu
>WENV170057359
CDZG01035324
49817
Bacteroidota
TGA
Ser
>WENV170057560
CDZG01042109
141365
Bacteroidota
GGG
Pro
>WENV170056733
CDZG01013628
371246
Bacteroidota
CCT
Arg
>WENV170056735
CDZG01013629
371246
Bacteroidota
CCT
Arg
>WENV170056751
CDZG01014180
448321
Bacteroidota
TTG
Gln
>WENV170057626
CDZG01044622
160434
Bacteroidota
GTG
His
>WENV170057981
CDZG01059007
160434
Bacteroidota
GTG
His
>WENV170057997
CDZG01059893
160434
Bacteroidota
GTG
His
>WENV170057793
CDZG01051265
27322
Bacteroidota
GCT
Ser
>WENV170057841
CDZG01053628
378278
Bacteroidota
CCT
Arg
>WENV170056944
CDZG01020894
166971
Bacteroidota
>WENV170057062
CDZG01025136
288732
Bacteroidota
CTT
Lys
>WENV170057063
CDZG01025136
288732
Bacteroidota
CTT
Lys
>WENV170057064
CDZG01025136
288732
Bacteroidota
CTT
Lys
>WENV170057714
CDZG01047894
288732
Bacteroidota
CTT
Lys
>WENV170057715
CDZG01047894
288732
Bacteroidota
CTT
Lys
>WENV170056470
CDZG01002472
369490
Bacteroidota
CTC
Glu
>WENV170056471
CDZG01002472
369490
Bacteroidota
CTC
Glu
>WENV170056472
CDZG01002472
369490
Bacteroidota
CTC
Glu
>WENV170056473
CDZG01002472
369490
Bacteroidota
CTC
Glu
>WENV170056474
CDZG01002472
369490
Bacteroidota
CTC
Glu
>WENV170056414
CDZG01000521
449090
Bacteroidota
CTG
Gln
>WENV170056485
CDZG01003514
58386
Bacteroidota
TGA
Ser
>WENV170056690
CDZG01011624
58386
Bacteroidota
TGA
Ser
>WENV170057865
CDZG01054188
58386
Bacteroidota
TGA
Ser
>WENV170058133
CDZG01063903
58386
Bacteroidota
TGA
Ser
>WENV170056600
CDZG01007987
386044
Bacteroidota
>WENV170057850
CDZG01053659
386044
Bacteroidota
>WENV170057969
CDZG01058969
166972
Bacteroidota
TGT
Thr
>WENV170057811
CDZG01052113
288453
Bacteroidota
>WENV170056697
CDZG01012058
162594
Bacteroidota
GGC
Ala
>WENV170056726
CDZG01013208
162594
Bacteroidota
GGC
Ala
>WENV170056440
CDZG01001873
293859
Bacteroidota
CCA
Trp
>WENV170057720
CDZG01048255
293859
Bacteroidota
CCA
Trp
>WENV170056749
CDZG01014180
41238
Bacteroidota
TAA
Leu
>WENV170056671
CDZG01010587
193541
Bacteroidota
GTT
Asn
>WENV170058016
CDZG01059956
294312
Bacteroidota
CCA
Trp
>WENV170057320
CDZG01033845
159412
Bacteroidota
GTC
Asp
>WENV170057321
CDZG01033845
159412
Bacteroidota
GTC
Asp
>WENV170057322
CDZG01033845
159412
Bacteroidota
GTC
Asp
>WENV170057323
CDZG01033845
159412
Bacteroidota
GTC
Asp
>WENV170057842
CDZG01053647
160415
Bacteroidota
TCT
Arg
>WENV170057813
CDZG01052223
448601
Bacteroidota
TTG
Gln
>WENV170058063
CDZG01062295
448601
Bacteroidota
TTG
Gln
>WENV170058015
CDZG01059956
369492
Bacteroidota
GGT
Thr
>WENV170056682
CDZG01011099
377484
Bacteroidota
CCT
Arg
>WENV170057494
CDZG01040031
113804
Bacteroidota
CAA
Leu
>WENV170056417
CDZG01000617
105933
Bacteroidota
CAG
Leu
>WENV170056419
CDZG01000617
105933
Bacteroidota
CAG
Leu
>WENV170057786
CDZG01051071
142268
Bacteroidota
TAC
Val
>WENV170057533
CDZG01041175
410456
Bacteroidota
CCC
Gly
>WENV170056488
CDZG01003955
414056
Bacteroidota
GGT
Thr
>WENV170057959
CDZG01058468
414056
Bacteroidota
GGT
Thr
>WENV170056483
CDZG01002956
105282
Bacteroidota
TAG
Leu
>WENV170056509
CDZG01005029
278748
Bacteroidota
CCC
Gly
>WENV170057024
CDZG01023506
261340
Bacteroidota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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