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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170057280
CDZG01032272
235097
Bacteroidota
TTT
Lys
>WENV170057074
CDZG01025632
95987
Bacteroidota
CAA
Leu
>WENV170058015
CDZG01059956
339412
Bacteroidota
GGT
Thr
>WENV170057802
CDZG01051914
235102
Bacteroidota
CGT
Thr
>WENV170058104
CDZG01063280
146761
Bacteroidota
GAT
Ile
>WENV170056538
CDZG01006432
144657
Bacteroidota
CGG
Pro
>WENV170057690
CDZG01046738
243025
Bacteroidota
CAT
Met
>WENV170057156
CDZG01027657
243025
Bacteroidota
CAT
Met
>WENV170057053
CDZG01024593
243025
Bacteroidota
CAT
Met
>WENV170056419
CDZG01000617
97336
Bacteroidota
CAG
Leu
>WENV170056417
CDZG01000617
97336
Bacteroidota
CAG
Leu
>WENV170057239
CDZG01030342
126965
Bacteroidota
GGG
Pro
>WENV170056945
CDZG01020926
46165
Bacteroidota
TGA
Ser
>WENV170058141
CDZG01064474
17323
Bacteroidota
GGA
Ser
>WENV170056877
CDZG01018393
17323
Bacteroidota
GGA
Ser
>WENV170056532
CDZG01006420
413663
Bacteroidota
CTG
Gln
>WENV170056531
CDZG01006420
413663
Bacteroidota
CTG
Gln
>WENV170056530
CDZG01006420
413663
Bacteroidota
CTG
Gln
>WENV170056529
CDZG01006420
413663
Bacteroidota
CTG
Gln
>WENV170056579
CDZG01007495
415410
Bacteroidota
TTG
Gln
>WENV170056571
CDZG01007477
415410
Bacteroidota
TTG
Gln
>WENV170058016
CDZG01059956
237797
Bacteroidota
CCA
Trp
>WENV170058179
CDZG01065569
59689
Bacteroidota
CAG
Leu
>WENV170057429
CDZG01038414
59689
Bacteroidota
CAG
Leu
>WENV170056751
CDZG01014180
412479
Bacteroidota
TTG
Gln
>WENV170057476
CDZG01039972
188343
Bacteroidota
TGC
Ala
>WENV170057337
CDZG01034328
188343
Bacteroidota
TGC
Ala
>WENV170057580
CDZG01043031
147147
Bacteroidota
GTG
His
>WENV170057579
CDZG01043031
147147
Bacteroidota
GTG
His
>WENV170057578
CDZG01043031
147147
Bacteroidota
GTG
His
>WENV170057577
CDZG01043031
147147
Bacteroidota
GTG
His
>WENV170057959
CDZG01058468
344692
Bacteroidota
GGT
Thr
>WENV170056488
CDZG01003955
344692
Bacteroidota
GGT
Thr
>WENV170057850
CDZG01053659
353373
Bacteroidota
>WENV170056600
CDZG01007987
353373
Bacteroidota
>WENV170057199
CDZG01028857
341950
Bacteroidota
>WENV170056646
CDZG01009371
341950
Bacteroidota
>WENV170056462
CDZG01002031
341950
Bacteroidota
>WENV170056422
CDZG01000878
338124
Bacteroidota
CCG
Arg
>WENV170058033
CDZG01060857
338132
Bacteroidota
GCA
Cys
>WENV170057404
CDZG01037520
338132
Bacteroidota
GCA
Cys
>WENV170057076
CDZG01025639
338132
Bacteroidota
GCA
Cys
>WENV170057075
CDZG01025639
338132
Bacteroidota
GCA
Cys
>WENV170056815
CDZG01015747
338132
Bacteroidota
GCA
Cys
>WENV170056749
CDZG01014180
37076
Bacteroidota
TAA
Leu
>WENV170057740
CDZG01048919
280660
Bacteroidota
CCA
Trp
>WENV170056824
CDZG01016283
144933
Bacteroidota
TCT
Arg
>WENV170057997
CDZG01059893
144656
Bacteroidota
GTG
His
>WENV170057981
CDZG01059007
144656
Bacteroidota
GTG
His
>WENV170057626
CDZG01044622
144656
Bacteroidota
GTG
His
>WENV170057193
CDZG01028705
235207
Bacteroidota
CAT
Met
>WENV170057400
CDZG01037387
80607
Bacteroidota
GTA
Tyr
>WENV170056474
CDZG01002472
344769
Bacteroidota
CTC
Glu
>WENV170056473
CDZG01002472
344769
Bacteroidota
CTC
Glu
>WENV170056472
CDZG01002472
344769
Bacteroidota
CTC
Glu
>WENV170056471
CDZG01002472
344769
Bacteroidota
CTC
Glu
>WENV170056470
CDZG01002472
344769
Bacteroidota
CTC
Glu
>WENV170057270
CDZG01031943
80614
Bacteroidota
>WENV170058144
CDZG01064476
154643
Bacteroidota
CAT
Met
>WENV170058062
CDZG01062279
154643
Bacteroidota
CAT
Met
>WENV170056944
CDZG01020894
154643
Bacteroidota
CAT
Met
>WENV170056671
CDZG01010587
144590
Bacteroidota
GTT
Asn
>WENV170057531
CDZG01041129
95559
Bacteroidota
TAG
Leu
>WENV170056483
CDZG01002956
95875
Bacteroidota
TAG
Leu
>WENV170058148
CDZG01064489
44852
Bacteroidota
TAA
Leu
>WENV170057842
CDZG01053647
147439
Bacteroidota
TCT
Arg
>WENV170058133
CDZG01063903
50727
Bacteroidota
TGA
Ser
>WENV170057865
CDZG01054188
50727
Bacteroidota
TGA
Ser
>WENV170056690
CDZG01011624
50727
Bacteroidota
TGA
Ser
>WENV170056485
CDZG01003514
50727
Bacteroidota
TGA
Ser
>WENV170057493
CDZG01040020
425638
Bacteroidota
CTG
Gln
>WENV170056661
CDZG01010080
425638
Bacteroidota
CTG
Gln
>WENV170057353
CDZG01034911
19317
Bacteroidota
GGA
Ser
>WENV170057906
CDZG01056314
353927
Bacteroidota
TTC
Glu
>WENV170057448
CDZG01038941
353927
Bacteroidota
TTC
Glu
>WENV170056718
CDZG01013126
353927
Bacteroidota
TTC
Glu
>WENV170057719
CDZG01048220
185921
Bacteroidota
GTC
Asp
>WENV170057969
CDZG01058969
146530
Bacteroidota
TGT
Thr
>WENV170056912
CDZG01019369
414426
Bacteroidota
CTG
Gln
>WENV170056744
CDZG01014159
414426
Bacteroidota
CTG
Gln
>WENV170056612
CDZG01008155
16224
Bacteroidota
GGA
Ser
>WENV170056726
CDZG01013208
151960
Bacteroidota
GGC
Ala
>WENV170056697
CDZG01012058
151960
Bacteroidota
GGC
Ala
>WENV170057856
CDZG01054181
16220
Bacteroidota
GGA
Ser
>WENV170056507
CDZG01004847
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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