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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
114 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170060912
CDZI01025567
95987
Bacteroidota
CAA
Leu
>WENV170060800
CDZI01020141
141635
Bacteroidota
TAC
Val
>WENV170061303
CDZI01042152
141635
Bacteroidota
TAC
Val
>WENV170060633
CDZI01012262
339412
Bacteroidota
GGT
Thr
>WENV170060841
CDZI01022318
339412
Bacteroidota
GGT
Thr
>WENV170061865
CDZI01068127
339412
Bacteroidota
GGT
Thr
>WENV170061753
CDZI01062878
235102
Bacteroidota
CGT
Thr
>WENV170060645
CDZI01012774
267954
Bacteroidota
GCC
Gly
>WENV170061888
CDZI01069170
146761
Bacteroidota
GAT
Ile
>WENV170060899
CDZI01025358
237796
Bacteroidota
CGT
Thr
>WENV170061732
CDZI01061479
144657
Bacteroidota
CGG
Pro
>WENV170061449
CDZI01050136
144657
Bacteroidota
CGG
Pro
>WENV170061372
CDZI01045579
144657
Bacteroidota
CGG
Pro
>WENV170061686
CDZI01059238
243025
Bacteroidota
CAT
Met
>WENV170061119
CDZI01035034
243025
Bacteroidota
CAT
Met
>WENV170060578
CDZI01009280
243025
Bacteroidota
CAT
Met
>WENV170061235
CDZI01040256
97336
Bacteroidota
CAG
Leu
>WENV170061233
CDZI01040256
97336
Bacteroidota
CAG
Leu
>WENV170061624
CDZI01056967
126965
Bacteroidota
GGG
Pro
>WENV170061277
CDZI01041505
153993
Bacteroidota
GAT
Ile
>WENV170061545
CDZI01054032
58715
Bacteroidota
GAG
Leu
>WENV170061529
CDZI01053922
46165
Bacteroidota
TGA
Ser
>WENV170060935
CDZI01026452
17323
Bacteroidota
GGA
Ser
>WENV170060473
CDZI01005012
338486
Bacteroidota
CAT
Met
>WENV170061399
CDZI01046747
394247
Bacteroidota
CTC
Glu
>WENV170061010
CDZI01030463
413663
Bacteroidota
CTG
Gln
>WENV170061009
CDZI01030463
413663
Bacteroidota
CTG
Gln
>WENV170061008
CDZI01030463
413663
Bacteroidota
CTG
Gln
>WENV170061007
CDZI01030463
413663
Bacteroidota
CTG
Gln
>WENV170061006
CDZI01030463
413663
Bacteroidota
CTG
Gln
>WENV170060799
CDZI01020141
136244
Bacteroidota
TAC
Val
>WENV170061866
CDZI01068127
237797
Bacteroidota
CCA
Trp
>WENV170060712
CDZI01014742
59689
Bacteroidota
CAG
Leu
>WENV170061827
CDZI01065904
436206
Bacteroidota
TTG
Gln
>WENV170061751
CDZI01062875
436206
Bacteroidota
TTG
Gln
>WENV170060873
CDZI01024445
436206
Bacteroidota
TTG
Gln
>WENV170061231
CDZI01040255
412479
Bacteroidota
TTG
Gln
>WENV170061702
CDZI01060377
188343
Bacteroidota
TGC
Ala
>WENV170060736
CDZI01015926
147147
Bacteroidota
GTG
His
>WENV170060709
CDZI01014706
147147
Bacteroidota
GTG
His
>WENV170060708
CDZI01014706
147147
Bacteroidota
GTG
His
>WENV170061962
CDZI01072000
155123
Bacteroidota
GTT
Asn
>WENV170061748
CDZI01062723
344692
Bacteroidota
GGT
Thr
>WENV170061526
CDZI01053922
344692
Bacteroidota
GGT
Thr
>WENV170060936
CDZI01026452
344692
Bacteroidota
GGT
Thr
>WENV170062034
CDZI01075192
353373
Bacteroidota
>WENV170061858
CDZI01067557
338124
Bacteroidota
CCG
Arg
>WENV170061260
CDZI01040894
338124
Bacteroidota
CCG
Arg
>WENV170060377
CDZI01002239
126641
Bacteroidota
TAC
Val
>WENV170061610
CDZI01056393
338132
Bacteroidota
GCA
Cys
>WENV170061241
CDZI01040258
338132
Bacteroidota
GCA
Cys
>WENV170061240
CDZI01040258
338132
Bacteroidota
GCA
Cys
>WENV170060580
CDZI01009359
338132
Bacteroidota
GCA
Cys
>WENV170060579
CDZI01009359
338132
Bacteroidota
GCA
Cys
>WENV170060534
CDZI01007103
338132
Bacteroidota
GCA
Cys
>WENV170061700
CDZI01060369
193809
Bacteroidota
CAT
Met
>WENV170060697
CDZI01014061
193809
Bacteroidota
CAT
Met
>WENV170061538
CDZI01053934
37076
Bacteroidota
TAA
Leu
>WENV170061229
CDZI01040255
37076
Bacteroidota
TAA
Leu
>WENV170061872
CDZI01068633
301449
Bacteroidota
CGG
Pro
>WENV170060620
CDZI01011699
301449
Bacteroidota
CGG
Pro
>WENV170060409
CDZI01003387
301449
Bacteroidota
CGG
Pro
>WENV170061401
CDZI01047308
144933
Bacteroidota
TCT
Arg
>WENV170060400
CDZI01002861
144656
Bacteroidota
GTG
His
>WENV170060885
CDZI01024762
235207
Bacteroidota
CAT
Met
>WENV170060526
CDZI01006891
235207
Bacteroidota
CAT
Met
>WENV170060471
CDZI01004634
143169
Bacteroidota
GGG
Pro
>WENV170061034
CDZI01031273
144596
Bacteroidota
GGC
Ala
>WENV170061309
CDZI01042704
80607
Bacteroidota
GTA
Tyr
>WENV170061170
CDZI01036862
80607
Bacteroidota
GTA
Tyr
>WENV170060879
CDZI01024615
113604
Bacteroidota
>WENV170061288
CDZI01041526
344769
Bacteroidota
CTC
Glu
>WENV170061287
CDZI01041526
344769
Bacteroidota
CTC
Glu
>WENV170060924
CDZI01025911
16999
Bacteroidota
GGA
Ser
>WENV170061194
CDZI01038219
80614
Bacteroidota
>WENV170061334
CDZI01043963
154643
Bacteroidota
CAT
Met
>WENV170061140
CDZI01036255
154643
Bacteroidota
CAT
Met
>WENV170061847
CDZI01066963
415558
Bacteroidota
TTG
Gln
>WENV170061041
CDZI01031627
144590
Bacteroidota
GTT
Asn
>WENV170061040
CDZI01031627
144590
Bacteroidota
GTT
Asn
>WENV170060485
CDZI01005627
95559
Bacteroidota
TAG
Leu
>WENV170060654
CDZI01012889
144655
Bacteroidota
GGC
Ala
>WENV170061301
CDZI01042117
151121
Bacteroidota
CAT
Met
>WENV170061485
CDZI01051334
139743
Bacteroidota
GGG
Pro
>WENV170061244
CDZI01040275
147439
Bacteroidota
TCT
Arg
>WENV170061639
CDZI01057574
196394
Bacteroidota
GTC
Asp
>WENV170061638
CDZI01057574
196394
Bacteroidota
GTC
Asp
>WENV170061123
CDZI01035041
196394
Bacteroidota
GTC
Asp
>WENV170061122
CDZI01035041
196394
Bacteroidota
GTC
Asp
>WENV170060711
CDZI01014740
425638
Bacteroidota
CTG
Gln
>WENV170061952
CDZI01071550
94703
Bacteroidota
GTA
Tyr
>WENV170062000
CDZI01073390
353927
Bacteroidota
TTC
Glu
>WENV170060758
CDZI01017124
353927
Bacteroidota
TTC
Glu
>WENV170060369
CDZI01001504
353927
Bacteroidota
TTC
Glu
>WENV170061210
CDZI01038941
146530
Bacteroidota
TGT
Thr
>WENV170061530
CDZI01053925
414426
Bacteroidota
CTG
Gln
>WENV170060609
CDZI01010418
414426
Bacteroidota
CTG
Gln
>WENV170061903
CDZI01069763
56823
Bacteroidota
TGA
Ser
>WENV170061664
CDZI01058669
56823
Bacteroidota
TGA
Ser
>WENV170061380
CDZI01046091
56823
Bacteroidota
TGA
Ser
>WENV170060862
CDZI01024027
56823
Bacteroidota
TGA
Ser
>WENV170060714
CDZI01014744
56823
Bacteroidota
TGA
Ser
>WENV170061439
CDZI01049596
151960
Bacteroidota
GGC
Ala
>WENV170061343
CDZI01044574
151960
Bacteroidota
GGC
Ala
>WENV170060675
CDZI01013522
151960
Bacteroidota
GGC
Ala
>WENV170060418
CDZI01003864
151960
Bacteroidota
GGC
Ala
>WENV170060376
CDZI01002202
16220
Bacteroidota
GGA
Ser
>WENV170060868
CDZI01024155
338125
Bacteroidota
CCT
Arg
>WENV170060404
CDZI01003295
338125
Bacteroidota
CCT
Arg
>WENV170061869
CDZI01068422
235129
Bacteroidota
GCC
Gly
>WENV170061979
CDZI01072787
313363
Bacteroidota
GAA
Phe
>WENV170061318
CDZI01043182
313363
Bacteroidota
GAA
Phe
>WENV170060789
CDZI01019575
313363
Bacteroidota
GAA
Phe
>WENV170060529
CDZI01006944
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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