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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
103 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170072086
CDZR01019743
196621
Bacillota
GTC
Asp
>WENV170072775
CDZR01049750
196621
Bacillota
GTC
Asp
>WENV170071912
CDZR01011963
155958
Bacillota
GAT
Ile
>WENV170073021
CDZR01060240
202812
Bacillota
CAT
Met
>WENV170072055
CDZR01018348
309417
Bacillota
GGC
Ala
>WENV170072356
CDZR01031767
309417
Bacillota
GGC
Ala
>WENV170071926
CDZR01012446
37213
Bacillota
TGA
Ser
>WENV170071744
CDZR01005160
144612
Bacillota
TCT
Arg
>WENV170072534
CDZR01040061
144612
Bacillota
TCT
Arg
>WENV170072577
CDZR01041735
144612
Bacillota
TCT
Arg
>WENV170072586
CDZR01042155
144612
Bacillota
TCT
Arg
>WENV170072373
CDZR01032043
339890
Bacillota
TTG
Gln
>WENV170073020
CDZR01060177
235098
Bacillota
GAC
Val
>WENV170072954
CDZR01056857
235098
Bacillota
GAC
Val
>WENV170072652
CDZR01046063
235098
Bacillota
GAC
Val
>WENV170072930
CDZR01055635
148239
Bacillota
TCT
Arg
>WENV170072072
CDZR01018421
148239
Bacillota
TCT
Arg
>WENV170072911
CDZR01054430
44854
Bacillota
TGA
Ser
>WENV170071871
CDZR01009916
44854
Bacillota
TGA
Ser
>WENV170072660
CDZR01046124
307003
Bacillota
TGC
Ala
>WENV170072524
CDZR01039886
307003
Bacillota
TGC
Ala
>WENV170071653
CDZR01002354
307003
Bacillota
TGC
Ala
>WENV170072383
CDZR01032405
59312
Bacillota
CAG
Leu
>WENV170072710
CDZR01047721
338147
Bacillota
CTC
Glu
>WENV170072621
CDZR01043880
338147
Bacillota
CTC
Glu
>WENV170071691
CDZR01003750
338147
Bacillota
CTC
Glu
>WENV170072113
CDZR01020836
235150
Bacillota
TGC
Ala
>WENV170071978
CDZR01014723
235150
Bacillota
TGC
Ala
>WENV170071921
CDZR01012434
235137
Bacillota
TGC
Ala
>WENV170072840
CDZR01052274
293599
Bacillota
CTT
Lys
>WENV170072251
CDZR01027369
235114
Bacillota
TTT
Lys
>WENV170072689
CDZR01047030
198770
Bacillota
GTC
Asp
>WENV170071577
CDZR01000001
198770
Bacillota
GTC
Asp
>WENV170071582
CDZR01000001
313454
Bacillota
GAA
Phe
>WENV170071919
CDZR01012404
11034
Bacillota
GGA
Ser
>WENV170072931
CDZR01055635
156937
Bacillota
GTG
His
>WENV170072183
CDZR01024677
235079
Bacillota
GAA
Phe
>WENV170072981
CDZR01058348
173314
Bacillota
GAT
Ile
>WENV170072795
CDZR01050424
338149
Bacillota
CTC
Glu
>WENV170072715
CDZR01047893
338149
Bacillota
CTC
Glu
>WENV170071909
CDZR01011695
338149
Bacillota
CTC
Glu
>WENV170071881
CDZR01010560
338149
Bacillota
CTC
Glu
>WENV170071610
CDZR01000941
271471
Bacillota
GCC
Gly
>WENV170071668
CDZR01002828
245298
Bacillota
CGG
Pro
>WENV170072972
CDZR01057893
37269
Bacillota
TGA
Ser
>WENV170072908
CDZR01054247
37269
Bacillota
TGA
Ser
>WENV170071798
CDZR01006794
169968
Bacillota
CAT
Met
>WENV170071581
CDZR01000001
169968
Bacillota
CAT
Met
>WENV170072280
CDZR01028163
235078
Bacillota
TAC
Val
>WENV170072194
CDZR01024739
235078
Bacillota
TAC
Val
>WENV170072190
CDZR01024739
235078
Bacillota
TAC
Val
>WENV170072186
CDZR01024739
235078
Bacillota
TAC
Val
>WENV170072168
CDZR01023883
235078
Bacillota
TAC
Val
>WENV170072164
CDZR01023883
235078
Bacillota
TAC
Val
>WENV170072035
CDZR01017320
100326
Bacillota
GTA
Tyr
>WENV170072762
CDZR01049475
144610
Bacillota
GTG
His
>WENV170072281
CDZR01028163
240017
Bacillota
GCC
Gly
>WENV170072193
CDZR01024739
240017
Bacillota
GCC
Gly
>WENV170072189
CDZR01024739
240017
Bacillota
GCC
Gly
>WENV170072171
CDZR01023883
240017
Bacillota
GCC
Gly
>WENV170072167
CDZR01023883
240017
Bacillota
GCC
Gly
>WENV170072163
CDZR01023883
240017
Bacillota
GCC
Gly
>WENV170072983
CDZR01058711
411547
Bacillota
CTG
Gln
>WENV170072801
CDZR01050941
411547
Bacillota
CTG
Gln
>WENV170072704
CDZR01047366
411547
Bacillota
CTG
Gln
>WENV170072182
CDZR01024623
411547
Bacillota
CTG
Gln
>WENV170071911
CDZR01011870
411547
Bacillota
CTG
Gln
>WENV170071667
CDZR01002828
411547
Bacillota
CTG
Gln
>WENV170072828
CDZR01051386
4624
Bacillota
GCT
Ser
>WENV170072345
CDZR01030990
263765
Bacillota
TAC
Val
>WENV170071822
CDZR01007780
263765
Bacillota
TAC
Val
>WENV170071598
CDZR01000488
263765
Bacillota
TAC
Val
>WENV170072991
CDZR01059260
235095
Bacillota
GGT
Thr
>WENV170072217
CDZR01026127
235095
Bacillota
GGT
Thr
>WENV170072087
CDZR01019743
235095
Bacillota
GGT
Thr
>WENV170072151
CDZR01022756
411549
Bacillota
TTG
Gln
>WENV170072137
CDZR01021964
411549
Bacillota
TTG
Gln
>WENV170072099
CDZR01020000
411549
Bacillota
TTG
Gln
>WENV170072802
CDZR01050943
245386
Bacillota
CCA
Trp
>WENV170072465
CDZR01037548
245386
Bacillota
CCA
Trp
>WENV170072854
CDZR01052835
148188
Bacillota
CCG
Arg
>WENV170072418
CDZR01035052
148188
Bacillota
CCG
Arg
>WENV170072966
CDZR01057249
80612
Bacillota
GTA
Tyr
>WENV170072777
CDZR01049790
256380
Bacillota
>WENV170072307
CDZR01029637
338129
Bacillota
TGT
Thr
>WENV170071686
CDZR01003442
338129
Bacillota
TGT
Thr
>WENV170072135
CDZR01021940
157838
Bacillota
GTC
Asp
>WENV170071974
CDZR01014609
157838
Bacillota
GTC
Asp
>WENV170072292
CDZR01029382
144583
Bacillota
ACG
Arg
>WENV170072244
CDZR01027167
144583
Bacillota
ACG
Arg
>WENV170071683
CDZR01003380
144583
Bacillota
ACG
Arg
>WENV170072506
CDZR01039072
247734
Bacillota
TGC
Ala
>WENV170072774
CDZR01049750
235171
Bacillota
CCA
Trp
>WENV170072059
CDZR01018404
238974
Bacillota
GAA
Phe
>WENV170071778
CDZR01005773
238974
Bacillota
GAA
Phe
>WENV170072796
CDZR01050424
144621
Bacillota
GTT
Asn
>WENV170072716
CDZR01047893
144621
Bacillota
GTT
Asn
>WENV170072496
CDZR01038444
58712
Bacillota
CAG
Leu
>WENV170072174
CDZR01023944
248965
Bacillota
GCC
Gly
>WENV170072021
CDZR01017073
144594
Bacillota
CAC
Val
>WENV170071938
CDZR01013104
144594
Bacillota
CAC
Val
>WENV170071614
CDZR01001422
414486
Bacillota
CCC
Gly
>WENV170072536
CDZR01040275
114075
Bacillota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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