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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
108 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170095099
CEAI01018498
235097
Bacteroidota
TTT
Lys
>WENV170095168
CEAI01020809
235097
Bacteroidota
TTT
Lys
>WENV170094737
CEAI01006321
235102
Bacteroidota
CGT
Thr
>WENV170094838
CEAI01010072
267954
Bacteroidota
GCC
Gly
>WENV170095065
CEAI01017505
144657
Bacteroidota
CGG
Pro
>WENV170094755
CEAI01007010
243025
Bacteroidota
CAT
Met
>WENV170094892
CEAI01011792
243025
Bacteroidota
CAT
Met
>WENV170094677
CEAI01004785
338155
Bacteroidota
CTC
Glu
>WENV170094990
CEAI01014767
338155
Bacteroidota
CTC
Glu
>WENV170095029
CEAI01016215
338155
Bacteroidota
CTC
Glu
>WENV170095257
CEAI01024232
338155
Bacteroidota
CTC
Glu
>WENV170094734
CEAI01006091
58715
Bacteroidota
GAG
Leu
>WENV170094760
CEAI01007032
46165
Bacteroidota
TGA
Ser
>WENV170095128
CEAI01018974
95618
Bacteroidota
TAG
Leu
>WENV170094963
CEAI01013502
338486
Bacteroidota
CAT
Met
>WENV170094823
CEAI01009513
338486
Bacteroidota
CAT
Met
>WENV170095014
CEAI01015663
59689
Bacteroidota
CAG
Leu
>WENV170094733
CEAI01006091
59689
Bacteroidota
CAG
Leu
>WENV170094673
CEAI01004772
436206
Bacteroidota
TTG
Gln
>WENV170094672
CEAI01004769
436206
Bacteroidota
TTG
Gln
>WENV170094642
CEAI01003953
436206
Bacteroidota
TTG
Gln
>WENV170094550
CEAI01000529
436206
Bacteroidota
TTG
Gln
>WENV170095260
CEAI01024237
20893
Bacteroidota
GGA
Ser
>WENV170095036
CEAI01016578
20893
Bacteroidota
GGA
Ser
>WENV170094792
CEAI01008322
344692
Bacteroidota
GGT
Thr
>WENV170094956
CEAI01013111
235182
Bacteroidota
>WENV170094882
CEAI01011536
272983
Bacteroidota
CGT
Thr
>WENV170095278
CEAI01024873
338124
Bacteroidota
CCG
Arg
>WENV170094949
CEAI01012898
235203
Bacteroidota
TTT
Lys
>WENV170094762
CEAI01007032
238121
Bacteroidota
CTT
Lys
>WENV170094761
CEAI01007032
238121
Bacteroidota
CTT
Lys
>WENV170095157
CEAI01020430
126641
Bacteroidota
TAC
Val
>WENV170095274
CEAI01024690
338132
Bacteroidota
GCA
Cys
>WENV170094856
CEAI01010454
338132
Bacteroidota
GCA
Cys
>WENV170094721
CEAI01005749
338132
Bacteroidota
GCA
Cys
>WENV170094617
CEAI01003249
338132
Bacteroidota
GCA
Cys
>WENV170094601
CEAI01002641
338132
Bacteroidota
GCA
Cys
>WENV170094720
CEAI01005743
144688
Bacteroidota
CAT
Met
>WENV170094763
CEAI01007032
45423
Bacteroidota
TGA
Ser
>WENV170094624
CEAI01003500
193809
Bacteroidota
CAT
Met
>WENV170094991
CEAI01014768
181746
Bacteroidota
GGC
Ala
>WENV170094995
CEAI01014962
58714
Bacteroidota
CAA
Leu
>WENV170095235
CEAI01023420
301449
Bacteroidota
CGG
Pro
>WENV170095214
CEAI01023032
301449
Bacteroidota
CGG
Pro
>WENV170094702
CEAI01005733
301449
Bacteroidota
CGG
Pro
>WENV170094636
CEAI01003797
301449
Bacteroidota
CGG
Pro
>WENV170094627
CEAI01003504
301449
Bacteroidota
CGG
Pro
>WENV170094613
CEAI01003124
301449
Bacteroidota
CGG
Pro
>WENV170094662
CEAI01004472
144933
Bacteroidota
TCT
Arg
>WENV170094804
CEAI01008855
144933
Bacteroidota
TCT
Arg
>WENV170095084
CEAI01018214
144933
Bacteroidota
TCT
Arg
>WENV170094902
CEAI01011982
141414
Bacteroidota
GGG
Pro
>WENV170094897
CEAI01011976
141414
Bacteroidota
GGG
Pro
>WENV170094688
CEAI01004997
141414
Bacteroidota
GGG
Pro
>WENV170094561
CEAI01001003
144656
Bacteroidota
GTG
His
>WENV170095137
CEAI01019760
235207
Bacteroidota
CAT
Met
>WENV170095008
CEAI01015662
235207
Bacteroidota
CAT
Met
>WENV170095249
CEAI01023845
144659
Bacteroidota
GTG
His
>WENV170095248
CEAI01023845
144659
Bacteroidota
GTG
His
>WENV170095066
CEAI01017505
235180
Bacteroidota
CCA
Trp
>WENV170095125
CEAI01018973
80607
Bacteroidota
GTA
Tyr
>WENV170095097
CEAI01018498
80607
Bacteroidota
GTA
Tyr
>WENV170094917
CEAI01012374
80607
Bacteroidota
GTA
Tyr
>WENV170094594
CEAI01002374
80607
Bacteroidota
GTA
Tyr
>WENV170095196
CEAI01022252
113604
Bacteroidota
>WENV170094748
CEAI01006508
113604
Bacteroidota
>WENV170094745
CEAI01006508
113604
Bacteroidota
>WENV170094752
CEAI01007001
16999
Bacteroidota
GGA
Ser
>WENV170095247
CEAI01023845
80614
Bacteroidota
>WENV170095101
CEAI01018501
80614
Bacteroidota
>WENV170095030
CEAI01016216
154643
Bacteroidota
CAT
Met
>WENV170095120
CEAI01018973
144590
Bacteroidota
GTT
Asn
>WENV170095119
CEAI01018973
144590
Bacteroidota
GTT
Asn
>WENV170094727
CEAI01005865
95559
Bacteroidota
TAG
Leu
>WENV170094563
CEAI01001006
144655
Bacteroidota
GGC
Ala
>WENV170094981
CEAI01014387
338164
Bacteroidota
TTC
Glu
>WENV170094980
CEAI01014387
338164
Bacteroidota
TTC
Glu
>WENV170094640
CEAI01003800
338164
Bacteroidota
TTC
Glu
>WENV170094996
CEAI01014962
95875
Bacteroidota
TAG
Leu
>WENV170095266
CEAI01024510
338314
Bacteroidota
CCT
Arg
>WENV170094803
CEAI01008854
139743
Bacteroidota
GGG
Pro
>WENV170095040
CEAI01016584
240012
Bacteroidota
CCC
Gly
>WENV170095123
CEAI01018973
44852
Bacteroidota
TAA
Leu
>WENV170094960
CEAI01013463
147439
Bacteroidota
TCT
Arg
>WENV170094582
CEAI01001584
411550
Bacteroidota
CTG
Gln
>WENV170094581
CEAI01001584
411550
Bacteroidota
CTG
Gln
>WENV170094880
CEAI01011533
338165
Bacteroidota
GGT
Thr
>WENV170094781
CEAI01007963
19528
Bacteroidota
GGA
Ser
>WENV170095185
CEAI01021610
425638
Bacteroidota
CTG
Gln
>WENV170094868
CEAI01010956
425638
Bacteroidota
CTG
Gln
>WENV170094655
CEAI01004103
425638
Bacteroidota
CTG
Gln
>WENV170094921
CEAI01012378
353927
Bacteroidota
TTC
Glu
>WENV170095224
CEAI01023284
23696
Bacteroidota
GCT
Ser
>WENV170095028
CEAI01016215
23696
Bacteroidota
GCT
Ser
>WENV170094989
CEAI01014767
23696
Bacteroidota
GCT
Ser
>WENV170094656
CEAI01004287
414426
Bacteroidota
CTG
Gln
>WENV170095179
CEAI01021162
56823
Bacteroidota
TGA
Ser
>WENV170095176
CEAI01021017
56823
Bacteroidota
TGA
Ser
>WENV170094951
CEAI01012900
56823
Bacteroidota
TGA
Ser
>WENV170094780
CEAI01007963
56823
Bacteroidota
TGA
Ser
>WENV170094556
CEAI01000868
56823
Bacteroidota
TGA
Ser
>WENV170094899
CEAI01011976
16220
Bacteroidota
GGA
Ser
>WENV170095189
CEAI01021805
338125
Bacteroidota
CCT
Arg
>WENV170095121
CEAI01018973
338125
Bacteroidota
CCT
Arg
>WENV170094957
CEAI01013114
235129
Bacteroidota
GCC
Gly
>WENV170094732
CEAI01006091
235129
Bacteroidota
GCC
Gly
>WENV170094842
CEAI01010209
313363
Bacteroidota
GAA
Phe
>WENV170095225
CEAI01023289
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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