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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
130 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170100031
CEAQ01000171
141635
Bacteroidota
TAC
Val
>WENV170100032
CEAQ01000171
141635
Bacteroidota
TAC
Val
>WENV170100033
CEAQ01000171
141635
Bacteroidota
TAC
Val
>WENV170100041
CEAQ01000435
143169
Bacteroidota
GGG
Pro
>WENV170100043
CEAQ01000563
425638
Bacteroidota
CTG
Gln
>WENV170100046
CEAQ01000717
414426
Bacteroidota
CTG
Gln
>WENV170100047
CEAQ01000723
44852
Bacteroidota
TAA
Leu
>WENV170100053
CEAQ01000901
339341
Bacteroidota
GGT
Thr
>WENV170100052
CEAQ01000901
80614
Bacteroidota
>WENV170100056
CEAQ01000944
338155
Bacteroidota
CTC
Glu
>WENV170100055
CEAQ01000944
23696
Bacteroidota
GCT
Ser
>WENV170100066
CEAQ01001113
144659
Bacteroidota
GTG
His
>WENV170100064
CEAQ01001113
80614
Bacteroidota
>WENV170100096
CEAQ01002067
17323
Bacteroidota
GGA
Ser
>WENV170100105
CEAQ01002097
235097
Bacteroidota
TTT
Lys
>WENV170100106
CEAQ01002109
126641
Bacteroidota
TAC
Val
>WENV170100115
CEAQ01002611
425638
Bacteroidota
CTG
Gln
>WENV170100116
CEAQ01002638
235207
Bacteroidota
CAT
Met
>WENV170100118
CEAQ01002748
80607
Bacteroidota
GTA
Tyr
>WENV170100125
CEAQ01002972
144655
Bacteroidota
GGC
Ala
>WENV170100131
CEAQ01003297
144596
Bacteroidota
GGC
Ala
>WENV170100135
CEAQ01003308
56823
Bacteroidota
TGA
Ser
>WENV170100140
CEAQ01003506
235097
Bacteroidota
TTT
Lys
>WENV170100160
CEAQ01003722
313363
Bacteroidota
GAA
Phe
>WENV170100161
CEAQ01003742
144655
Bacteroidota
GGC
Ala
>WENV170100168
CEAQ01004059
338132
Bacteroidota
GCA
Cys
>WENV170100169
CEAQ01004344
56823
Bacteroidota
TGA
Ser
>WENV170100172
CEAQ01004399
240012
Bacteroidota
CCC
Gly
>WENV170100176
CEAQ01004661
56823
Bacteroidota
TGA
Ser
>WENV170100190
CEAQ01005154
238121
Bacteroidota
CTT
Lys
>WENV170100189
CEAQ01005154
238121
Bacteroidota
CTT
Lys
>WENV170100191
CEAQ01005154
50727
Bacteroidota
TGA
Ser
>WENV170100192
CEAQ01005159
56823
Bacteroidota
TGA
Ser
>WENV170100204
CEAQ01006011
20893
Bacteroidota
GGA
Ser
>WENV170100212
CEAQ01006163
144655
Bacteroidota
GGC
Ala
>WENV170100217
CEAQ01006365
143169
Bacteroidota
GGG
Pro
>WENV170100223
CEAQ01006525
150485
Bacteroidota
GTT
Asn
>WENV170100222
CEAQ01006525
150485
Bacteroidota
GTT
Asn
>WENV170100224
CEAQ01006529
235203
Bacteroidota
TTT
Lys
>WENV170100239
CEAQ01007273
353927
Bacteroidota
TTC
Glu
>WENV170100238
CEAQ01007273
353927
Bacteroidota
TTC
Glu
>WENV170100258
CEAQ01007415
280660
Bacteroidota
CCA
Trp
>WENV170100260
CEAQ01007520
59689
Bacteroidota
CAG
Leu
>WENV170100262
CEAQ01007564
425638
Bacteroidota
CTG
Gln
>WENV170100263
CEAQ01007688
80607
Bacteroidota
GTA
Tyr
>WENV170100273
CEAQ01008123
113604
Bacteroidota
>WENV170100290
CEAQ01008453
243025
Bacteroidota
CAT
Met
>WENV170100297
CEAQ01009031
338125
Bacteroidota
CCT
Arg
>WENV170100303
CEAQ01009247
338132
Bacteroidota
GCA
Cys
>WENV170100302
CEAQ01009247
411550
Bacteroidota
CTG
Gln
>WENV170100301
CEAQ01009247
411550
Bacteroidota
CTG
Gln
>WENV170100300
CEAQ01009247
23696
Bacteroidota
GCT
Ser
>WENV170100310
CEAQ01009284
44852
Bacteroidota
TAA
Leu
>WENV170100318
CEAQ01009593
243025
Bacteroidota
CAT
Met
>WENV170100327
CEAQ01010064
303954
Bacteroidota
GCC
Gly
>WENV170100326
CEAQ01010064
303954
Bacteroidota
GCC
Gly
>WENV170100336
CEAQ01010574
267954
Bacteroidota
GCC
Gly
>WENV170100340
CEAQ01010708
144933
Bacteroidota
TCT
Arg
>WENV170100351
CEAQ01011126
436206
Bacteroidota
TTG
Gln
>WENV170100355
CEAQ01011135
436206
Bacteroidota
TTG
Gln
>WENV170100356
CEAQ01011136
235129
Bacteroidota
GCC
Gly
>WENV170100358
CEAQ01011138
80607
Bacteroidota
GTA
Tyr
>WENV170100367
CEAQ01011323
353927
Bacteroidota
TTC
Glu
>WENV170100368
CEAQ01011334
280513
Bacteroidota
TTT
Lys
>WENV170100372
CEAQ01011516
144590
Bacteroidota
GTT
Asn
>WENV170100371
CEAQ01011516
144590
Bacteroidota
GTT
Asn
>WENV170100370
CEAQ01011516
144590
Bacteroidota
GTT
Asn
>WENV170100382
CEAQ01011839
147439
Bacteroidota
TCT
Arg
>WENV170100386
CEAQ01011893
338125
Bacteroidota
CCT
Arg
>WENV170100394
CEAQ01012144
94703
Bacteroidota
GTA
Tyr
>WENV170100396
CEAQ01012162
58714
Bacteroidota
CAA
Leu
>WENV170100401
CEAQ01012164
338486
Bacteroidota
CAT
Met
>WENV170100402
CEAQ01012170
144657
Bacteroidota
CGG
Pro
>WENV170100403
CEAQ01012170
235180
Bacteroidota
CCA
Trp
>WENV170100418
CEAQ01012660
56823
Bacteroidota
TGA
Ser
>WENV170100426
CEAQ01013053
95559
Bacteroidota
TAG
Leu
>WENV170100433
CEAQ01013179
301449
Bacteroidota
CGG
Pro
>WENV170100435
CEAQ01013453
301449
Bacteroidota
CGG
Pro
>WENV170100439
CEAQ01013608
338486
Bacteroidota
CAT
Met
>WENV170100443
CEAQ01013855
338124
Bacteroidota
CCG
Arg
>WENV170100445
CEAQ01013962
144659
Bacteroidota
GTG
His
>WENV170100444
CEAQ01013962
144659
Bacteroidota
GTG
His
>WENV170100456
CEAQ01014295
235129
Bacteroidota
GCC
Gly
>WENV170100462
CEAQ01014465
145504
Bacteroidota
TGT
Thr
>WENV170100461
CEAQ01014465
144639
Bacteroidota
GGC
Ala
>WENV170100469
CEAQ01014754
80607
Bacteroidota
GTA
Tyr
>WENV170100470
CEAQ01014755
338486
Bacteroidota
CAT
Met
>WENV170100481
CEAQ01015303
338155
Bacteroidota
CTC
Glu
>WENV170100480
CEAQ01015303
23696
Bacteroidota
GCT
Ser
>WENV170100485
CEAQ01015441
144656
Bacteroidota
GTG
His
>WENV170100487
CEAQ01015442
301449
Bacteroidota
CGG
Pro
>WENV170100489
CEAQ01015445
94703
Bacteroidota
GTA
Tyr
>WENV170100493
CEAQ01015631
338132
Bacteroidota
GCA
Cys
>WENV170100498
CEAQ01015989
338125
Bacteroidota
CCT
Arg
>WENV170100506
CEAQ01016145
185921
Bacteroidota
GTC
Asp
>WENV170100505
CEAQ01016145
185921
Bacteroidota
GTC
Asp
>WENV170100509
CEAQ01016244
235102
Bacteroidota
CGT
Thr
>WENV170100513
CEAQ01016460
94703
Bacteroidota
GTA
Tyr
>WENV170100514
CEAQ01016461
143169
Bacteroidota
GGG
Pro
>WENV170100521
CEAQ01016633
235165
Bacteroidota
CCA
Trp
>WENV170100517
CEAQ01016633
303954
Bacteroidota
GCC
Gly
>WENV170100519
CEAQ01016633
94703
Bacteroidota
GTA
Tyr
>WENV170100531
CEAQ01017062
139743
Bacteroidota
GGG
Pro
>WENV170100532
CEAQ01017068
436206
Bacteroidota
TTG
Gln
>WENV170100547
CEAQ01017863
58715
Bacteroidota
GAG
Leu
>WENV170100554
CEAQ01018053
94703
Bacteroidota
GTA
Tyr
>WENV170100558
CEAQ01018377
144933
Bacteroidota
TCT
Arg
>WENV170100562
CEAQ01018569
19528
Bacteroidota
GGA
Ser
>WENV170100566
CEAQ01018762
80614
Bacteroidota
>WENV170100576
CEAQ01019247
436206
Bacteroidota
TTG
Gln
>WENV170100579
CEAQ01019310
144596
Bacteroidota
GGC
Ala
>WENV170100582
CEAQ01019468
338132
Bacteroidota
GCA
Cys
>WENV170100585
CEAQ01019474
20893
Bacteroidota
GGA
Ser
>WENV170100586
CEAQ01019475
95875
Bacteroidota
TAG
Leu
>WENV170100595
CEAQ01019752
80607
Bacteroidota
GTA
Tyr
>WENV170100604
CEAQ01020141
45423
Bacteroidota
TGA
Ser
>WENV170100605
CEAQ01020145
144655
Bacteroidota
GGC
Ala
>WENV170100612
CEAQ01020338
193809
Bacteroidota
CAT
Met
>WENV170100614
CEAQ01020351
16999
Bacteroidota
GGA
Ser
>WENV170100616
CEAQ01020522
338164
Bacteroidota
TTC
Glu
>WENV170100615
CEAQ01020522
338164
Bacteroidota
TTC
Glu
>WENV170100618
CEAQ01020924
154643
Bacteroidota
CAT
Met
>WENV170100628
CEAQ01021095
16224
Bacteroidota
GGA
Ser
>WENV170100630
CEAQ01021233
141635
Bacteroidota
TAC
Val
>WENV170100631
CEAQ01021233
141635
Bacteroidota
TAC
Val
>WENV170100637
CEAQ01021234
353927
Bacteroidota
TTC
Glu
>WENV170100641
CEAQ01021405
16999
Bacteroidota
GGA
Ser
>WENV170100642
CEAQ01021407
235129
Bacteroidota
GCC
Gly
>WENV170100644
CEAQ01021563
301449
Bacteroidota
CGG
Pro
>WENV170100647
CEAQ01021626
16220
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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