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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
145 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170102061
CEAX01000292
338132
Bacteroidota
GCA
Cys
>WENV170102069
CEAX01000592
144596
Bacteroidota
GGC
Ala
>WENV170102082
CEAX01001356
185921
Bacteroidota
GTC
Asp
>WENV170102084
CEAX01001357
45423
Bacteroidota
TGA
Ser
>WENV170102086
CEAX01001379
154643
Bacteroidota
CAT
Met
>WENV170102096
CEAX01001772
80607
Bacteroidota
GTA
Tyr
>WENV170102110
CEAX01002582
147439
Bacteroidota
TCT
Arg
>WENV170102111
CEAX01002601
193809
Bacteroidota
CAT
Met
>WENV170102120
CEAX01002916
151960
Bacteroidota
GGC
Ala
>WENV170102124
CEAX01003024
19317
Bacteroidota
GGA
Ser
>WENV170102143
CEAX01003453
411543
Bacteroidota
CTG
Gln
>WENV170102155
CEAX01003939
52358
Bacteroidota
TGA
Ser
>WENV170102193
CEAX01005790
235203
Bacteroidota
TTT
Lys
>WENV170102200
CEAX01005800
243025
Bacteroidota
CAT
Met
>WENV170102212
CEAX01006321
243025
Bacteroidota
CAT
Met
>WENV170102245
CEAX01007656
80614
Bacteroidota
>WENV170102270
CEAX01008509
144659
Bacteroidota
GTG
His
>WENV170102271
CEAX01008509
144659
Bacteroidota
GTG
His
>WENV170102283
CEAX01009307
414426
Bacteroidota
CTG
Gln
>WENV170102289
CEAX01009310
144933
Bacteroidota
TCT
Arg
>WENV170102291
CEAX01009318
126641
Bacteroidota
TAC
Val
>WENV170102322
CEAX01010880
17323
Bacteroidota
GGA
Ser
>WENV170102326
CEAX01010933
411629
Bacteroidota
TTG
Gln
>WENV170102358
CEAX01011676
238121
Bacteroidota
CTT
Lys
>WENV170102371
CEAX01012383
144659
Bacteroidota
GTG
His
>WENV170102384
CEAX01013060
144596
Bacteroidota
GGC
Ala
>WENV170102392
CEAX01013444
128251
Bacteroidota
TGG
Pro
>WENV170102396
CEAX01013447
80614
Bacteroidota
>WENV170102397
CEAX01013447
339341
Bacteroidota
GGT
Thr
>WENV170102410
CEAX01013830
52358
Bacteroidota
TGA
Ser
>WENV170102411
CEAX01013830
144656
Bacteroidota
GTG
His
>WENV170102414
CEAX01013831
126966
Bacteroidota
TAC
Val
>WENV170102415
CEAX01013831
126966
Bacteroidota
TAC
Val
>WENV170102416
CEAX01013831
126966
Bacteroidota
TAC
Val
>WENV170102432
CEAX01014761
235203
Bacteroidota
TTT
Lys
>WENV170102434
CEAX01014764
132360
Bacteroidota
GGG
Pro
>WENV170102435
CEAX01014764
341950
Bacteroidota
>WENV170102436
CEAX01014764
344692
Bacteroidota
GGT
Thr
>WENV170102462
CEAX01015906
263771
Bacteroidota
CTT
Lys
>WENV170102466
CEAX01015909
95875
Bacteroidota
TAG
Leu
>WENV170102477
CEAX01016576
19317
Bacteroidota
GGA
Ser
>WENV170102513
CEAX01017502
338165
Bacteroidota
GGT
Thr
>WENV170102516
CEAX01017508
235203
Bacteroidota
TTT
Lys
>WENV170102533
CEAX01018037
16224
Bacteroidota
GGA
Ser
>WENV170102535
CEAX01018049
415410
Bacteroidota
TTG
Gln
>WENV170102564
CEAX01018473
95618
Bacteroidota
TAG
Leu
>WENV170102571
CEAX01018947
338486
Bacteroidota
CAT
Met
>WENV170102576
CEAX01018964
185921
Bacteroidota
GTC
Asp
>WENV170102586
CEAX01019454
235129
Bacteroidota
GCC
Gly
>WENV170102601
CEAX01019960
144590
Bacteroidota
GTT
Asn
>WENV170102602
CEAX01019960
144590
Bacteroidota
GTT
Asn
>WENV170102603
CEAX01019960
144590
Bacteroidota
GTT
Asn
>WENV170102604
CEAX01019960
338125
Bacteroidota
CCT
Arg
>WENV170102606
CEAX01019960
44852
Bacteroidota
TAA
Leu
>WENV170102608
CEAX01019960
80607
Bacteroidota
GTA
Tyr
>WENV170102614
CEAX01019963
235207
Bacteroidota
CAT
Met
>WENV170102615
CEAX01019972
23696
Bacteroidota
GCT
Ser
>WENV170102616
CEAX01019972
338155
Bacteroidota
CTC
Glu
>WENV170102618
CEAX01020116
95875
Bacteroidota
TAG
Leu
>WENV170102625
CEAX01020394
338132
Bacteroidota
GCA
Cys
>WENV170102646
CEAX01021427
46165
Bacteroidota
TGA
Ser
>WENV170102660
CEAX01021842
52358
Bacteroidota
TGA
Ser
>WENV170102690
CEAX01022619
341950
Bacteroidota
>WENV170102697
CEAX01022714
240012
Bacteroidota
CCC
Gly
>WENV170102714
CEAX01023161
132360
Bacteroidota
GGG
Pro
>WENV170102728
CEAX01023759
280513
Bacteroidota
TTT
Lys
>WENV170102729
CEAX01023760
338132
Bacteroidota
GCA
Cys
>WENV170102732
CEAX01023760
80607
Bacteroidota
GTA
Tyr
>WENV170102734
CEAX01023760
52358
Bacteroidota
TGA
Ser
>WENV170102736
CEAX01023760
235097
Bacteroidota
TTT
Lys
>WENV170102749
CEAX01024269
415410
Bacteroidota
TTG
Gln
>WENV170102770
CEAX01024735
80614
Bacteroidota
>WENV170102782
CEAX01025519
154643
Bacteroidota
CAT
Met
>WENV170102787
CEAX01025520
52358
Bacteroidota
TGA
Ser
>WENV170102788
CEAX01025547
267954
Bacteroidota
GCC
Gly
>WENV170102799
CEAX01025956
338132
Bacteroidota
GCA
Cys
>WENV170102826
CEAX01026464
154643
Bacteroidota
CAT
Met
>WENV170102853
CEAX01027281
59689
Bacteroidota
CAG
Leu
>WENV170102856
CEAX01027281
144657
Bacteroidota
CGG
Pro
>WENV170102857
CEAX01027281
235180
Bacteroidota
CCA
Trp
>WENV170102876
CEAX01028016
58715
Bacteroidota
GAG
Leu
>WENV170102884
CEAX01028516
243025
Bacteroidota
CAT
Met
>WENV170102911
CEAX01029043
338155
Bacteroidota
CTC
Glu
>WENV170102916
CEAX01029394
414426
Bacteroidota
CTG
Gln
>WENV170102926
CEAX01029572
80614
Bacteroidota
>WENV170102942
CEAX01029880
144596
Bacteroidota
GGC
Ala
>WENV170102944
CEAX01029883
343138
Bacteroidota
CCT
Arg
>WENV170102945
CEAX01029883
338164
Bacteroidota
TTC
Glu
>WENV170102946
CEAX01029883
338164
Bacteroidota
TTC
Glu
>WENV170102999
CEAX01031721
95559
Bacteroidota
TAG
Leu
>WENV170103008
CEAX01032194
144639
Bacteroidota
GGC
Ala
>WENV170103013
CEAX01032204
267954
Bacteroidota
GCC
Gly
>WENV170103030
CEAX01033060
132360
Bacteroidota
GGG
Pro
>WENV170103031
CEAX01033060
419272
Bacteroidota
CTG
Gln
>WENV170103032
CEAX01033060
16220
Bacteroidota
GGA
Ser
>WENV170103041
CEAX01033344
154643
Bacteroidota
CAT
Met
>WENV170103042
CEAX01033713
235097
Bacteroidota
TTT
Lys
>WENV170103055
CEAX01034541
58714
Bacteroidota
CAA
Leu
>WENV170103059
CEAX01034601
240012
Bacteroidota
CCC
Gly
>WENV170103068
CEAX01035059
338132
Bacteroidota
GCA
Cys
>WENV170103070
CEAX01035059
23696
Bacteroidota
GCT
Ser
>WENV170103071
CEAX01035070
154643
Bacteroidota
CAT
Met
>WENV170103107
CEAX01035944
58714
Bacteroidota
CAA
Leu
>WENV170103128
CEAX01036818
153993
Bacteroidota
GAT
Ile
>WENV170103139
CEAX01036972
415410
Bacteroidota
TTG
Gln
>WENV170103149
CEAX01037499
113604
Bacteroidota
>WENV170103162
CEAX01037931
353927
Bacteroidota
TTC
Glu
>WENV170103179
CEAX01038414
144655
Bacteroidota
GGC
Ala
>WENV170103186
CEAX01038863
414426
Bacteroidota
CTG
Gln
>WENV170103187
CEAX01038864
414426
Bacteroidota
CTG
Gln
>WENV170103217
CEAX01039378
411550
Bacteroidota
CTG
Gln
>WENV170103218
CEAX01039378
411550
Bacteroidota
CTG
Gln
>WENV170103233
CEAX01040478
144657
Bacteroidota
CGG
Pro
>WENV170103256
CEAX01041291
19317
Bacteroidota
GGA
Ser
>WENV170103268
CEAX01041763
235129
Bacteroidota
GCC
Gly
>WENV170103300
CEAX01043166
243025
Bacteroidota
CAT
Met
>WENV170103310
CEAX01043974
95987
Bacteroidota
CAA
Leu
>WENV170103312
CEAX01043974
341950
Bacteroidota
>WENV170103313
CEAX01043974
341950
Bacteroidota
>WENV170103324
CEAX01044403
235203
Bacteroidota
TTT
Lys
>WENV170103331
CEAX01044415
425638
Bacteroidota
CTG
Gln
>WENV170103349
CEAX01045574
144933
Bacteroidota
TCT
Arg
>WENV170103350
CEAX01045797
425638
Bacteroidota
CTG
Gln
>WENV170103351
CEAX01045845
415410
Bacteroidota
TTG
Gln
>WENV170103364
CEAX01045890
113604
Bacteroidota
>WENV170103367
CEAX01045890
113604
Bacteroidota
>WENV170103370
CEAX01045892
185921
Bacteroidota
GTC
Asp
>WENV170103372
CEAX01045896
235129
Bacteroidota
GCC
Gly
>WENV170103386
CEAX01046775
235102
Bacteroidota
CGT
Thr
>WENV170103408
CEAX01047489
414426
Bacteroidota
CTG
Gln
>WENV170103442
CEAX01048378
338486
Bacteroidota
CAT
Met
>WENV170103449
CEAX01048394
132360
Bacteroidota
GGG
Pro
>WENV170103465
CEAX01048878
235129
Bacteroidota
GCC
Gly
>WENV170103467
CEAX01048878
235129
Bacteroidota
GCC
Gly
>WENV170103476
CEAX01049279
338124
Bacteroidota
CCG
Arg
>WENV170103497
CEAX01050106
151960
Bacteroidota
GGC
Ala
>WENV170103538
CEAX01050977
338486
Bacteroidota
CAT
Met
>WENV170103545
CEAX01051464
425638
Bacteroidota
CTG
Gln
>WENV170103546
CEAX01051521
58714
Bacteroidota
CAA
Leu
>WENV170103553
CEAX01051866
353927
Bacteroidota
TTC
Glu
>WENV170103570
CEAX01052158
19317
Bacteroidota
GGA
Ser
>WENV170103583
CEAX01052443
235129
Bacteroidota
GCC
Gly
>WENV170103585
CEAX01052824
19528
Bacteroidota
GGA
Ser
>WENV170103586
CEAX01052833
128251
Bacteroidota
TGG
Pro
>WENV170103610
CEAX01053272
16999
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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