This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
89 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170108438
CECA01029913
196621
Bacillota
GTC
Asp
>WENV170108846
CECA01049401
196621
Bacillota
GTC
Asp
>WENV170109189
CECA01067853
196621
Bacillota
GTC
Asp
>WENV170108860
CECA01050084
155958
Bacillota
GAT
Ile
>WENV170108957
CECA01055167
202812
Bacillota
CAT
Met
>WENV170108845
CECA01049192
309417
Bacillota
GGC
Ala
>WENV170109298
CECA01071620
309417
Bacillota
GGC
Ala
>WENV170109128
CECA01063452
144612
Bacillota
TCT
Arg
>WENV170109066
CECA01060106
156189
Bacillota
GAT
Ile
>WENV170109064
CECA01060093
235098
Bacillota
GAC
Val
>WENV170108678
CECA01040946
235098
Bacillota
GAC
Val
>WENV170108302
CECA01022598
235098
Bacillota
GAC
Val
>WENV170108682
CECA01040954
148239
Bacillota
TCT
Arg
>WENV170109197
CECA01068490
44854
Bacillota
TGA
Ser
>WENV170108320
CECA01023747
44854
Bacillota
TGA
Ser
>WENV170108440
CECA01029913
304022
Bacillota
GCC
Gly
>WENV170108304
CECA01022888
304022
Bacillota
GCC
Gly
>WENV170109166
CECA01066133
347827
Bacillota
TTC
Glu
>WENV170109025
CECA01058016
59312
Bacillota
CAG
Leu
>WENV170108642
CECA01040227
238910
Bacillota
CTT
Lys
>WENV170109080
CECA01060799
338147
Bacillota
CTC
Glu
>WENV170108814
CECA01047135
338147
Bacillota
CTC
Glu
>WENV170108173
CECA01015364
235150
Bacillota
TGC
Ala
>WENV170108213
CECA01017873
235114
Bacillota
TTT
Lys
>WENV170108127
CECA01013086
41154
Bacillota
TAA
Leu
>WENV170109024
CECA01058016
44859
Bacillota
AAG
Leu
>WENV170108383
CECA01027114
11034
Bacillota
GGA
Ser
>WENV170108437
CECA01029913
235117
Bacillota
TAC
Val
>WENV170108305
CECA01022888
235117
Bacillota
TAC
Val
>WENV170108683
CECA01040954
156937
Bacillota
GTG
His
>WENV170109329
CECA01073496
274189
Bacillota
TGT
Thr
>WENV170108731
CECA01043810
235079
Bacillota
GAA
Phe
>WENV170108439
CECA01029913
235079
Bacillota
GAA
Phe
>WENV170108475
CECA01031219
173314
Bacillota
GAT
Ile
>WENV170108780
CECA01045724
338149
Bacillota
CTC
Glu
>WENV170108225
CECA01018488
144766
Bacillota
CAT
Met
>WENV170108556
CECA01036093
245298
Bacillota
CGG
Pro
>WENV170107939
CECA01001056
245298
Bacillota
CGG
Pro
>WENV170109144
CECA01063945
340131
Bacillota
GTT
Asn
>WENV170108409
CECA01028650
169968
Bacillota
CAT
Met
>WENV170108940
CECA01054491
411547
Bacillota
CTG
Gln
>WENV170108555
CECA01036093
411547
Bacillota
CTG
Gln
>WENV170107938
CECA01001056
411547
Bacillota
CTG
Gln
>WENV170109198
CECA01068490
4624
Bacillota
GCT
Ser
>WENV170108968
CECA01055656
4624
Bacillota
GCT
Ser
>WENV170108321
CECA01023747
4624
Bacillota
GCT
Ser
>WENV170109387
CECA01076350
263765
Bacillota
TAC
Val
>WENV170108749
CECA01045050
263765
Bacillota
TAC
Val
>WENV170108819
CECA01047537
313104
Bacillota
TAC
Val
>WENV170108776
CECA01045714
313104
Bacillota
TAC
Val
>WENV170109190
CECA01067853
235095
Bacillota
GGT
Thr
>WENV170108963
CECA01055402
235095
Bacillota
GGT
Thr
>WENV170108847
CECA01049401
235095
Bacillota
GGT
Thr
>WENV170108540
CECA01034950
235095
Bacillota
GGT
Thr
>WENV170108319
CECA01023732
235095
Bacillota
GGT
Thr
>WENV170109157
CECA01065585
411549
Bacillota
TTG
Gln
>WENV170108782
CECA01046191
411549
Bacillota
TTG
Gln
>WENV170108080
CECA01010453
411549
Bacillota
TTG
Gln
>WENV170109118
CECA01062561
235142
Bacillota
CTT
Lys
>WENV170108734
CECA01043914
235142
Bacillota
CTT
Lys
>WENV170108120
CECA01012890
148188
Bacillota
CCG
Arg
>WENV170107925
CECA01000537
163943
Bacillota
GTC
Asp
>WENV170109056
CECA01059670
163943
Bacillota
GTC
Asp
>WENV170108880
CECA01051309
235124
Bacillota
TGG
Pro
>WENV170108576
CECA01037090
144583
Bacillota
ACG
Arg
>WENV170108314
CECA01023709
144652
Bacillota
GTC
Asp
>WENV170109188
CECA01067853
235171
Bacillota
CCA
Trp
>WENV170109124
CECA01063203
144621
Bacillota
GTT
Asn
>WENV170108781
CECA01045724
144621
Bacillota
GTT
Asn
>WENV170108335
CECA01024880
144621
Bacillota
GTT
Asn
>WENV170109104
CECA01061960
235113
Bacillota
GAA
Phe
>WENV170108222
CECA01018480
58712
Bacillota
CAG
Leu
>WENV170108034
CECA01006480
58712
Bacillota
CAG
Leu
>WENV170109327
CECA01073364
245296
Bacillota
CCC
Gly
>WENV170109213
CECA01069609
245296
Bacillota
CCC
Gly
>WENV170109301
CECA01071742
344240
Bacillota
GCC
Gly
>WENV170108699
CECA01042005
344240
Bacillota
GCC
Gly
>WENV170108698
CECA01042005
196632
Bacillota
GTC
Asp
>WENV170109097
CECA01061361
248965
Bacillota
GCC
Gly
>WENV170108207
CECA01017708
248965
Bacillota
GCC
Gly
>WENV170108474
CECA01031219
299139
Bacillota
TGC
Ala
>WENV170108136
CECA01013553
144594
Bacillota
CAC
Val
>WENV170109200
CECA01068508
95563
Bacillota
GTA
Tyr
>WENV170108852
CECA01049474
272488
Bacillota
GAA
Phe
>WENV170108410
CECA01028650
272488
Bacillota
GAA
Phe
>WENV170107976
CECA01003109
376360
Bacillota
GCA
Cys
>WENV170108381
CECA01026992
389329
Bacillota
TTC
Glu
>WENV170108211
CECA01017869
338128
Bacillota
TTC
Glu
>WENV170108164
CECA01014754
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK