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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
126 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170108691
CECA01041619
269918
Bacillota
CTT
Lys
>WENV170108692
CECA01041619
269918
Bacillota
CTT
Lys
>WENV170108693
CECA01041619
269918
Bacillota
CTT
Lys
>WENV170108305
CECA01022888
257969
Bacillota
TAC
Val
>WENV170108437
CECA01029913
257969
Bacillota
TAC
Val
>WENV170109104
CECA01061960
261392
Bacillota
GAA
Phe
>WENV170108329
CECA01024252
172175
Bacillota
GAC
Val
>WENV170108438
CECA01029913
159235
Bacillota
GTC
Asp
>WENV170108846
CECA01049401
159235
Bacillota
GTC
Asp
>WENV170109189
CECA01067853
159235
Bacillota
GTC
Asp
>WENV170109257
CECA01071030
19350
Bacillota
GCT
Ser
>WENV170108463
CECA01030589
162485
Bacillota
CAT
Met
>WENV170108304
CECA01022888
257968
Bacillota
GCC
Gly
>WENV170108440
CECA01029913
257968
Bacillota
GCC
Gly
>WENV170108936
CECA01053933
378043
Bacillota
>WENV170108462
CECA01030589
369774
Bacillota
GGT
Thr
>WENV170109346
CECA01074448
182782
Bacillota
ACG
Arg
>WENV170108439
CECA01029913
257970
Bacillota
GAA
Phe
>WENV170108731
CECA01043810
257970
Bacillota
GAA
Phe
>WENV170108250
CECA01019709
257963
Bacillota
>WENV170109399
CECA01076544
261354
Bacillota
GGT
Thr
>WENV170108814
CECA01047135
393129
Bacillota
CTC
Glu
>WENV170109080
CECA01060799
393129
Bacillota
CTC
Glu
>WENV170108223
CECA01018484
410090
Bacillota
GCC
Gly
>WENV170108854
CECA01049474
410090
Bacillota
GCC
Gly
>WENV170108649
CECA01040262
43034
Bacillota
TGA
Ser
>WENV170109188
CECA01067853
319387
Bacillota
CCA
Trp
>WENV170108120
CECA01012890
159242
Bacillota
CCG
Arg
>WENV170108957
CECA01055167
161902
Bacillota
CAT
Met
>WENV170107939
CECA01001056
257972
Bacillota
CGG
Pro
>WENV170108556
CECA01036093
257972
Bacillota
CGG
Pro
>WENV170108225
CECA01018488
175232
Bacillota
CAT
Met
>WENV170108579
CECA01037440
64854
Bacillota
TAA
Leu
>WENV170108471
CECA01031010
124618
Bacillota
GAG
Leu
>WENV170108740
CECA01044077
451223
Bacillota
GCA
Cys
>WENV170108173
CECA01015364
286917
Bacillota
TGC
Ala
>WENV170107938
CECA01001056
448255
Bacillota
CTG
Gln
>WENV170108555
CECA01036093
448255
Bacillota
CTG
Gln
>WENV170108940
CECA01054491
448255
Bacillota
CTG
Gln
>WENV170108136
CECA01013553
159234
Bacillota
CAC
Val
>WENV170109011
CECA01057334
181889
Bacillota
>WENV170108681
CECA01040954
143511
Bacillota
TGG
Pro
>WENV170109232
CECA01070361
268483
Bacillota
CTT
Lys
>WENV170108186
CECA01015923
162688
Bacillota
GAT
Ile
>WENV170108263
CECA01020200
162688
Bacillota
GAT
Ile
>WENV170108446
CECA01029966
162688
Bacillota
GAT
Ile
>WENV170108635
CECA01040103
162688
Bacillota
GAT
Ile
>WENV170108972
CECA01055673
162487
Bacillota
CGG
Pro
>WENV170108639
CECA01040197
133221
Bacillota
CAA
Leu
>WENV170107959
CECA01002313
106802
Bacillota
GTA
Tyr
>WENV170108161
CECA01014754
106802
Bacillota
GTA
Tyr
>WENV170109330
CECA01073496
106802
Bacillota
GTA
Tyr
>WENV170109128
CECA01063452
159237
Bacillota
TCT
Arg
>WENV170109158
CECA01065640
90522
Bacillota
CAG
Leu
>WENV170108523
CECA01033726
177383
Bacillota
CGG
Pro
>WENV170108368
CECA01026788
374673
Bacillota
CTC
Glu
>WENV170108872
CECA01050724
374673
Bacillota
CTC
Glu
>WENV170108970
CECA01055659
374673
Bacillota
CTC
Glu
>WENV170109051
CECA01059670
374673
Bacillota
CTC
Glu
>WENV170109099
CECA01061384
374673
Bacillota
CTC
Glu
>WENV170109339
CECA01073683
374673
Bacillota
CTC
Glu
>WENV170108885
CECA01051445
105206
Bacillota
GTA
Tyr
>WENV170108941
CECA01054548
105206
Bacillota
GTA
Tyr
>WENV170108734
CECA01043914
261284
Bacillota
CTT
Lys
>WENV170109118
CECA01062561
261284
Bacillota
CTT
Lys
>WENV170108212
CECA01017873
371263
Bacillota
TTG
Gln
>WENV170108343
CECA01025092
371263
Bacillota
TTG
Gln
>WENV170108345
CECA01025092
371263
Bacillota
TTG
Gln
>WENV170108925
CECA01053244
158271
Bacillota
CCT
Arg
>WENV170108164
CECA01014754
369393
Bacillota
TTC
Glu
>WENV170108211
CECA01017869
369393
Bacillota
TTC
Glu
>WENV170108860
CECA01050084
159089
Bacillota
GAT
Ile
>WENV170108276
CECA01020840
224291
Bacillota
CCT
Arg
>WENV170108416
CECA01029318
56553
Bacillota
CAG
Leu
>WENV170108417
CECA01029318
56553
Bacillota
CAG
Leu
>WENV170109024
CECA01058016
50190
Bacillota
AAG
Leu
>WENV170108641
CECA01040227
166292
Bacillota
GAT
Ile
>WENV170108675
CECA01040886
271703
Bacillota
GTG
His
>WENV170108383
CECA01027114
11993
Bacillota
GGA
Ser
>WENV170108548
CECA01035678
277767
Bacillota
CGC
Ala
>WENV170108591
CECA01038415
369776
Bacillota
CTG
Gln
>WENV170109028
CECA01058035
369776
Bacillota
CTG
Gln
>WENV170109131
CECA01063701
371251
Bacillota
>WENV170109038
CECA01059003
64856
Bacillota
CAA
Leu
>WENV170108320
CECA01023747
49796
Bacillota
TGA
Ser
>WENV170109197
CECA01068490
49796
Bacillota
TGA
Ser
>WENV170109342
CECA01074029
261393
Bacillota
CGT
Thr
>WENV170108321
CECA01023747
5393
Bacillota
GCT
Ser
>WENV170108968
CECA01055656
5393
Bacillota
GCT
Ser
>WENV170109198
CECA01068490
5393
Bacillota
GCT
Ser
>WENV170108676
CECA01040886
308738
Bacillota
TTG
Gln
>WENV170108640
CECA01040227
320672
Bacillota
TGC
Ala
>WENV170108080
CECA01010453
448256
Bacillota
TTG
Gln
>WENV170108782
CECA01046191
448256
Bacillota
TTG
Gln
>WENV170109157
CECA01065585
448256
Bacillota
TTG
Gln
>WENV170107924
CECA01000537
167205
Bacillota
TAC
Val
>WENV170108205
CECA01017708
167205
Bacillota
TAC
Val
>WENV170108490
CECA01031837
167205
Bacillota
TAC
Val
>WENV170108792
CECA01046321
261310
Bacillota
CGT
Thr
>WENV170108290
CECA01022438
452372
Bacillota
CCA
Trp
>WENV170108703
CECA01042300
449102
Bacillota
CCA
Trp
>WENV170107985
CECA01003278
257960
Bacillota
CGC
Ala
>WENV170108884
CECA01051429
257960
Bacillota
CGC
Ala
>WENV170107987
CECA01003622
18326
Bacillota
CGA
Ser
>WENV170109144
CECA01063945
413088
Bacillota
GTT
Asn
>WENV170108314
CECA01023709
162489
Bacillota
GTC
Asp
>WENV170108670
CECA01040608
369521
Bacillota
CTC
Glu
>WENV170108335
CECA01024880
159236
Bacillota
GTT
Asn
>WENV170108781
CECA01045724
159236
Bacillota
GTT
Asn
>WENV170109124
CECA01063203
159236
Bacillota
GTT
Asn
>WENV170109213
CECA01069609
257976
Bacillota
CCC
Gly
>WENV170109327
CECA01073364
257976
Bacillota
CCC
Gly
>WENV170108189
CECA01016262
162486
Bacillota
GAT
Ile
>WENV170108391
CECA01028020
162486
Bacillota
GAT
Ile
>WENV170107958
CECA01002313
258131
Bacillota
TGT
Thr
>WENV170108160
CECA01014754
258131
Bacillota
TGT
Thr
>WENV170108414
CECA01029258
159239
Bacillota
CCT
Arg
>WENV170109370
CECA01075509
71745
Bacillota
TAA
Leu
>WENV170108137
CECA01013560
89161
Bacillota
CAA
Leu
>WENV170108050
CECA01008250
369392
Bacillota
GCA
Cys
>WENV170108880
CECA01051309
257965
Bacillota
TGG
Pro
>WENV170108034
CECA01006480
64855
Bacillota
CAG
Leu
>WENV170108222
CECA01018480
64855
Bacillota
CAG
Leu
>WENV170108341
CECA01025050
159238
Bacillota
GTG
His
>WENV170109129
CECA01063452
159238
Bacillota
GTG
His
>WENV170108318
CECA01023730
369391
Bacillota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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