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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170112330
CEGE01001775
359029
Gammaproteobacteria
GGT
Thr
>WENV170112410
CEGE01005781
350432
Gammaproteobacteria
GTG
His
>WENV170112402
CEGE01005175
237766
Gammaproteobacteria
TAC
Val
>WENV170112348
CEGE01002757
158396
Gammaproteobacteria
ACG
Arg
>WENV170112349
CEGE01002757
158396
Gammaproteobacteria
ACG
Arg
>WENV170112350
CEGE01002757
158396
Gammaproteobacteria
ACG
Arg
>WENV170112303
CEGE01001393
152460
Gammaproteobacteria
GGG
Pro
>WENV170112344
CEGE01002556
96359
Gammaproteobacteria
GTA
Tyr
>WENV170112385
CEGE01004580
96359
Gammaproteobacteria
GTA
Tyr
>WENV170112386
CEGE01004580
96359
Gammaproteobacteria
GTA
Tyr
>WENV170112387
CEGE01004580
96359
Gammaproteobacteria
GTA
Tyr
>WENV170112277
CEGE01000799
95985
Gammaproteobacteria
TAG
Leu
>WENV170112353
CEGE01002797
240081
Gammaproteobacteria
GTT
Asn
>WENV170112365
CEGE01003731
283840
Gammaproteobacteria
TTC
Glu
>WENV170112364
CEGE01003731
283840
Gammaproteobacteria
TTC
Glu
>WENV170112236
CEGE01000149
283840
Gammaproteobacteria
TTC
Glu
>WENV170112270
CEGE01000558
199984
Gammaproteobacteria
CAT
Met
>WENV170112340
CEGE01002155
17819
Gammaproteobacteria
TGA
Ser
>WENV170112339
CEGE01002154
17819
Gammaproteobacteria
TGA
Ser
>WENV170112338
CEGE01002153
17819
Gammaproteobacteria
TGA
Ser
>WENV170112397
CEGE01004886
47425
Gammaproteobacteria
GGA
Ser
>WENV170112290
CEGE01001188
147114
Gammaproteobacteria
CCT
Arg
>WENV170112245
CEGE01000224
301997
Gammaproteobacteria
TTC
Glu
>WENV170112227
CEGE01000103
301997
Gammaproteobacteria
TTC
Glu
>WENV170112375
CEGE01004021
145196
Gammaproteobacteria
CAT
Met
>WENV170112289
CEGE01001183
235452
Gammaproteobacteria
GAA
Phe
>WENV170112241
CEGE01000195
59172
Gammaproteobacteria
CAA
Leu
>WENV170112329
CEGE01001775
341109
Gammaproteobacteria
TCC
Gly
>WENV170112425
CEGE01007727
235448
Gammaproteobacteria
CAT
Met
>WENV170112268
CEGE01000501
159514
Gammaproteobacteria
TGG
Pro
>WENV170112357
CEGE01003072
6976
Gammaproteobacteria
GCT
Ser
>WENV170112440
CEGE01013612
240083
Gammaproteobacteria
GCC
Gly
>WENV170112422
CEGE01007527
240084
Gammaproteobacteria
GGT
Thr
>WENV170112273
CEGE01000558
268812
Gammaproteobacteria
GTT
Asn
>WENV170112272
CEGE01000558
268812
Gammaproteobacteria
GTT
Asn
>WENV170112271
CEGE01000558
268812
Gammaproteobacteria
GTT
Asn
>WENV170112336
CEGE01001911
147118
Gammaproteobacteria
GAC
Val
>WENV170112318
CEGE01001680
113688
Gammaproteobacteria
GTA
Tyr
>WENV170112293
CEGE01001234
16396
Gammaproteobacteria
TGA
Ser
>WENV170112276
CEGE01000799
147123
Gammaproteobacteria
CAT
Met
>WENV170112404
CEGE01005502
235886
Gammaproteobacteria
TTC
Glu
>WENV170112432
CEGE01009278
412230
Gammaproteobacteria
GCA
Cys
>WENV170112390
CEGE01004674
189760
Gammaproteobacteria
TGG
Pro
>WENV170112352
CEGE01002790
189760
Gammaproteobacteria
TGG
Pro
>WENV170112351
CEGE01002790
189760
Gammaproteobacteria
TGG
Pro
>WENV170112345
CEGE01002599
45459
Gammaproteobacteria
GGA
Ser
>WENV170112309
CEGE01001525
240082
Gammaproteobacteria
TTT
Lys
>WENV170112308
CEGE01001525
240082
Gammaproteobacteria
TTT
Lys
>WENV170112408
CEGE01005781
146807
Gammaproteobacteria
TCT
Arg
>WENV170112279
CEGE01000799
339623
Gammaproteobacteria
TTG
Gln
>WENV170112278
CEGE01000799
339623
Gammaproteobacteria
TTG
Gln
>WENV170112260
CEGE01000434
147120
Gammaproteobacteria
CGG
Pro
>WENV170112269
CEGE01000555
162567
Gammaproteobacteria
CAT
Met
>WENV170112253
CEGE01000271
245151
Gammaproteobacteria
GTG
His
>WENV170112251
CEGE01000271
245151
Gammaproteobacteria
GTG
His
>WENV170112333
CEGE01001849
149234
Gammaproteobacteria
CCA
Trp
>WENV170112331
CEGE01001848
149234
Gammaproteobacteria
CCA
Trp
>WENV170112430
CEGE01008294
277971
Gammaproteobacteria
GCC
Gly
>WENV170112396
CEGE01004828
147117
Gammaproteobacteria
GTC
Asp
>WENV170112394
CEGE01004828
147117
Gammaproteobacteria
GTC
Asp
>WENV170112393
CEGE01004828
147117
Gammaproteobacteria
GTC
Asp
>WENV170112275
CEGE01000708
198797
Gammaproteobacteria
TGG
Pro
>WENV170112376
CEGE01004022
45152
Gammaproteobacteria
GGA
Ser
>WENV170112304
CEGE01001396
58757
Gammaproteobacteria
>WENV170112280
CEGE01000799
59175
Gammaproteobacteria
CAG
Leu
>WENV170112314
CEGE01001605
158083
Gammaproteobacteria
ACG
Arg
>WENV170112313
CEGE01001605
158083
Gammaproteobacteria
ACG
Arg
>WENV170112363
CEGE01003715
147127
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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