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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170329277
CESV01095465
259585
Alphaproteobacteria
CCA
Trp
>WENV170329515
CESV01127299
259585
Alphaproteobacteria
CCA
Trp
>WENV170329514
CESV01127198
125595
Alphaproteobacteria
>WENV170329749
CESV01157694
166599
Alphaproteobacteria
CAT
Met
>WENV170329820
CESV01165979
166599
Alphaproteobacteria
CAT
Met
>WENV170328768
CESV01045000
207103
Alphaproteobacteria
GTG
His
>WENV170330427
CESV01270939
391624
Alphaproteobacteria
TTG
Gln
>WENV170328852
CESV01052897
51370
Alphaproteobacteria
CAG
Leu
>WENV170328848
CESV01052363
302408
Alphaproteobacteria
GAA
Phe
>WENV170329261
CESV01093569
26306
Alphaproteobacteria
TGA
Ser
>WENV170329728
CESV01155799
449739
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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