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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170329277
CESV01095465
306070
Alphaproteobacteria
CCA
Trp
>WENV170329515
CESV01127299
306070
Alphaproteobacteria
CCA
Trp
>WENV170328457
CESV01016109
147089
Alphaproteobacteria
ACG
Arg
>WENV170329381
CESV01108872
147089
Alphaproteobacteria
ACG
Arg
>WENV170329514
CESV01127198
113700
Alphaproteobacteria
>WENV170328997
CESV01065788
109657
Alphaproteobacteria
TAG
Leu
>WENV170329897
CESV01172843
109657
Alphaproteobacteria
TAG
Leu
>WENV170328989
CESV01065437
257573
Alphaproteobacteria
GAA
Phe
>WENV170329001
CESV01066463
176908
Alphaproteobacteria
GTC
Asp
>WENV170328916
CESV01059335
199776
Alphaproteobacteria
CGG
Pro
>WENV170330133
CESV01188230
338282
Alphaproteobacteria
GTT
Asn
>WENV170329750
CESV01157808
339722
Alphaproteobacteria
TTG
Gln
>WENV170329105
CESV01077430
192195
Alphaproteobacteria
GTC
Asp
>WENV170329337
CESV01101821
258175
Alphaproteobacteria
CGC
Ala
>WENV170328448
CESV01015392
167926
Alphaproteobacteria
CAT
Met
>WENV170328768
CESV01045000
161002
Alphaproteobacteria
GTG
His
>WENV170329728
CESV01155799
412477
Alphaproteobacteria
GCA
Cys
>WENV170329085
CESV01075145
279830
Alphaproteobacteria
TAC
Val
>WENV170328676
CESV01035145
279830
Alphaproteobacteria
TAC
Val
>WENV170329239
CESV01091065
319925
Alphaproteobacteria
TGT
Thr
>WENV170328285
CESV01001923
319925
Alphaproteobacteria
TGT
Thr
>WENV170330489
CESV01314461
237155
Alphaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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