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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170357368
CETJ01173737
212548
Gammaproteobacteria
CCG
Arg
>WENV170356269
CETJ01017064
256881
Gammaproteobacteria
GTG
His
>WENV170357405
CETJ01182670
170011
Gammaproteobacteria
CCG
Arg
>WENV170357041
CETJ01091969
18367
Gammaproteobacteria
GCT
Ser
>WENV170356155
CETJ01008769
179231
Gammaproteobacteria
CCT
Arg
>WENV170356834
CETJ01071002
64826
Gammaproteobacteria
TAA
Leu
>WENV170356490
CETJ01038106
260014
Gammaproteobacteria
GTG
His
>WENV170357357
CETJ01171889
105430
Gammaproteobacteria
GTA
Tyr
>WENV170357378
CETJ01176471
49830
Gammaproteobacteria
GGA
Ser
>WENV170356509
CETJ01040247
161430
Gammaproteobacteria
CCG
Arg
>WENV170356863
CETJ01074306
64907
Gammaproteobacteria
GAG
Leu
>WENV170357069
CETJ01094537
319314
Gammaproteobacteria
TGT
Thr
>WENV170357109
CETJ01095833
26461
Gammaproteobacteria
TGA
Ser
>WENV170356944
CETJ01084330
369295
Gammaproteobacteria
CCT
Arg
>WENV170356361
CETJ01025375
158573
Gammaproteobacteria
CAT
Met
>WENV170357132
CETJ01096687
21793
Gammaproteobacteria
GGA
Ser
>WENV170356656
CETJ01055976
125783
Gammaproteobacteria
GTA
Tyr
>WENV170356928
CETJ01082342
161514
Gammaproteobacteria
TCT
Arg
>WENV170356761
CETJ01063724
50077
Gammaproteobacteria
GGA
Ser
>WENV170356265
CETJ01016792
172986
Gammaproteobacteria
CCA
Trp
>WENV170356311
CETJ01020652
172986
Gammaproteobacteria
CCA
Trp
>WENV170356977
CETJ01086814
325641
Gammaproteobacteria
CCA
Trp
>WENV170356807
CETJ01068386
448070
Gammaproteobacteria
GCA
Cys
>WENV170356726
CETJ01061586
272540
Gammaproteobacteria
GTT
Asn
>WENV170356694
CETJ01059325
297257
Gammaproteobacteria
TGC
Ala
>WENV170357288
CETJ01151399
159505
Gammaproteobacteria
CGG
Pro
>WENV170357139
CETJ01096924
65254
Gammaproteobacteria
TAA
Leu
>WENV170356270
CETJ01017064
106574
Gammaproteobacteria
TAG
Leu
>WENV170356098
CETJ01005151
172971
Gammaproteobacteria
CCG
Arg
>WENV170356274
CETJ01017859
107578
Gammaproteobacteria
GAG
Leu
>WENV170357209
CETJ01125565
26187
Gammaproteobacteria
GGA
Ser
>WENV170356302
CETJ01019937
323307
Gammaproteobacteria
GGT
Thr
>WENV170356615
CETJ01051640
263347
Gammaproteobacteria
TTT
Lys
>WENV170357434
CETJ01187375
258908
Gammaproteobacteria
CCT
Arg
>WENV170356677
CETJ01057657
27578
Gammaproteobacteria
CGA
Ser
>WENV170356153
CETJ01008769
214281
Gammaproteobacteria
ACG
Arg
>WENV170356154
CETJ01008769
214281
Gammaproteobacteria
ACG
Arg
>WENV170357131
CETJ01096667
161939
Gammaproteobacteria
GAC
Val
>WENV170357189
CETJ01117415
306475
Gammaproteobacteria
GTG
His
>WENV170357349
CETJ01168299
159512
Gammaproteobacteria
GGG
Pro
>WENV170357078
CETJ01094985
26462
Gammaproteobacteria
GGA
Ser
>WENV170357010
CETJ01089631
290512
Gammaproteobacteria
TGT
Thr
>WENV170357144
CETJ01096973
290512
Gammaproteobacteria
TGT
Thr
>WENV170356552
CETJ01046241
67081
Gammaproteobacteria
CAA
Leu
>WENV170357216
CETJ01128176
159511
Gammaproteobacteria
CCT
Arg
>WENV170356301
CETJ01019937
105812
Gammaproteobacteria
GTA
Tyr
>WENV170356621
CETJ01052479
26256
Gammaproteobacteria
CGA
Ser
>WENV170356657
CETJ01055976
448350
Gammaproteobacteria
TCC
Gly
>WENV170357239
CETJ01136528
161319
Gammaproteobacteria
>WENV170356417
CETJ01029290
77878
Gammaproteobacteria
CAG
Leu
>WENV170356658
CETJ01055976
369546
Gammaproteobacteria
GGT
Thr
>WENV170356485
CETJ01037086
65858
Gammaproteobacteria
CAA
Leu
>WENV170356680
CETJ01058013
64852
Gammaproteobacteria
CAG
Leu
>WENV170356879
CETJ01075737
282566
Gammaproteobacteria
GGT
Thr
>WENV170356995
CETJ01088148
265381
Gammaproteobacteria
GTT
Asn
>WENV170356701
CETJ01059531
220289
Gammaproteobacteria
CAT
Met
>WENV170356138
CETJ01007601
159507
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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