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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170356361
CETJ01025375
152317
Gammaproteobacteria
CAT
Met
>WENV170356851
CETJ01072622
183605
Gammaproteobacteria
CCG
Arg
>WENV170356414
CETJ01029140
235837
Gammaproteobacteria
GTT
Asn
>WENV170356765
CETJ01064194
235837
Gammaproteobacteria
GTT
Asn
>WENV170356794
CETJ01067633
20025
Gammaproteobacteria
GGA
Ser
>WENV170357239
CETJ01136528
147779
Gammaproteobacteria
CAT
Met
>WENV170356701
CETJ01059531
199984
Gammaproteobacteria
CAT
Met
>WENV170356615
CETJ01051640
283668
Gammaproteobacteria
TTT
Lys
>WENV170356879
CETJ01075737
249887
Gammaproteobacteria
GGT
Thr
>WENV170356677
CETJ01057657
24435
Gammaproteobacteria
CGA
Ser
>WENV170357167
CETJ01111645
61925
Gammaproteobacteria
TAA
Leu
>WENV170356694
CETJ01059325
236013
Gammaproteobacteria
TGC
Ala
>WENV170357378
CETJ01176471
45109
Gammaproteobacteria
GGA
Ser
>WENV170357216
CETJ01128176
147114
Gammaproteobacteria
CCT
Arg
>WENV170357457
CETJ01190028
269248
Gammaproteobacteria
CCA
Trp
>WENV170356661
CETJ01056260
276072
Gammaproteobacteria
>WENV170356660
CETJ01056260
276072
Gammaproteobacteria
>WENV170357109
CETJ01095833
24434
Gammaproteobacteria
TGA
Ser
>WENV170357304
CETJ01155977
144979
Gammaproteobacteria
CGG
Pro
>WENV170357064
CETJ01094058
240642
Gammaproteobacteria
GTT
Asn
>WENV170356311
CETJ01020652
149036
Gammaproteobacteria
CCA
Trp
>WENV170356265
CETJ01016792
149036
Gammaproteobacteria
CCA
Trp
>WENV170357131
CETJ01096667
146791
Gammaproteobacteria
GAC
Val
>WENV170356845
CETJ01071997
412799
Gammaproteobacteria
GCA
Cys
>WENV170356824
CETJ01070585
412799
Gammaproteobacteria
GCA
Cys
>WENV170356082
CETJ01004494
340801
Gammaproteobacteria
CCT
Arg
>WENV170356807
CETJ01068386
426403
Gammaproteobacteria
GCA
Cys
>WENV170356154
CETJ01008769
199268
Gammaproteobacteria
ACG
Arg
>WENV170356153
CETJ01008769
199268
Gammaproteobacteria
ACG
Arg
>WENV170357139
CETJ01096924
62553
Gammaproteobacteria
TAA
Leu
>WENV170356680
CETJ01058013
62501
Gammaproteobacteria
CAG
Leu
>WENV170356269
CETJ01017064
269152
Gammaproteobacteria
GTG
His
>WENV170356509
CETJ01040247
147111
Gammaproteobacteria
CCG
Arg
>WENV170357078
CETJ01094985
23429
Gammaproteobacteria
GGA
Ser
>WENV170356521
CETJ01042087
268812
Gammaproteobacteria
GTT
Asn
>WENV170356136
CETJ01007404
147118
Gammaproteobacteria
GAC
Val
>WENV170356449
CETJ01033229
173040
Gammaproteobacteria
GAC
Val
>WENV170356656
CETJ01055976
113688
Gammaproteobacteria
GTA
Tyr
>WENV170356944
CETJ01084330
338337
Gammaproteobacteria
CCT
Arg
>WENV170357434
CETJ01187375
238372
Gammaproteobacteria
CCT
Arg
>WENV170356816
CETJ01069299
128930
Gammaproteobacteria
GTC
Asp
>WENV170356928
CETJ01082342
146807
Gammaproteobacteria
TCT
Arg
>WENV170356485
CETJ01037086
59658
Gammaproteobacteria
CAA
Leu
>WENV170357456
CETJ01189938
293332
Gammaproteobacteria
GAA
Phe
>WENV170357288
CETJ01151399
147120
Gammaproteobacteria
CGG
Pro
>WENV170356490
CETJ01038106
237159
Gammaproteobacteria
GTG
His
>WENV170356138
CETJ01007601
147117
Gammaproteobacteria
GTC
Asp
>WENV170357349
CETJ01168299
147112
Gammaproteobacteria
GGG
Pro
>WENV170357209
CETJ01125565
23396
Gammaproteobacteria
GGA
Ser
>WENV170357144
CETJ01096973
266766
Gammaproteobacteria
TGT
Thr
>WENV170357010
CETJ01089631
266766
Gammaproteobacteria
TGT
Thr
>WENV170357011
CETJ01089795
173617
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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