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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180013909
FPIC01009256
237406
Thermotogota
GTG
His
>WENV180013885
FPIC01007233
146781
Thermotogota
CGG
Pro
>WENV180013975
FPIC01019604
59101
Thermotogota
GTA
Tyr
>WENV180013922
FPIC01010748
237402
Thermotogota
TTC
Glu
>WENV180014056
FPIC01038718
339422
Thermotogota
CCT
Arg
>WENV180014025
FPIC01031704
146777
Thermotogota
GCA
Cys
>WENV180014055
FPIC01038718
380089
Thermotogota
CTC
Glu
>WENV180014059
FPIC01039354
338583
Thermotogota
GAC
Val
>WENV180014113
FPIC01057166
237409
Thermotogota
CGC
Ala
>WENV180013910
FPIC01009256
146778
Thermotogota
TCG
Arg
>WENV180014181
FPIC01082044
146780
Thermotogota
GGG
Pro
>WENV180014034
FPIC01033005
147393
Thermotogota
CAT
Met
>WENV180013946
FPIC01013088
16373
Thermotogota
GGA
Ser
>WENV180013876
FPIC01006596
412135
Thermotogota
CTG
Gln
>WENV180013973
FPIC01019508
95906
Thermotogota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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