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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170634339
FYBJ01000245
340312
Alphaproteobacteria
TTG
Gln
>WENV170634419
FYBJ01001209
381459
Alphaproteobacteria
CAC
Val
>WENV170634470
FYBJ01001417
381459
Alphaproteobacteria
CAC
Val
>WENV170634498
FYBJ01001505
381459
Alphaproteobacteria
CAC
Val
>WENV170634440
FYBJ01001392
237493
Alphaproteobacteria
CCA
Trp
>WENV170634407
FYBJ01001047
237739
Alphaproteobacteria
CGT
Thr
>WENV170634473
FYBJ01001426
147089
Alphaproteobacteria
ACG
Arg
>WENV170634542
FYBJ01001855
412917
Alphaproteobacteria
TCC
Gly
>WENV170634518
FYBJ01001627
113700
Alphaproteobacteria
>WENV170634331
FYBJ01000191
113700
Alphaproteobacteria
>WENV170634317
FYBJ01000165
146875
Alphaproteobacteria
GTG
His
>WENV170634507
FYBJ01001567
239119
Alphaproteobacteria
CGT
Thr
>WENV170634469
FYBJ01001417
23671
Alphaproteobacteria
CGA
Ser
>WENV170634556
FYBJ01002036
338282
Alphaproteobacteria
GTT
Asn
>WENV170634555
FYBJ01002011
338282
Alphaproteobacteria
GTT
Asn
>WENV170634490
FYBJ01001478
338282
Alphaproteobacteria
GTT
Asn
>WENV170634432
FYBJ01001381
338282
Alphaproteobacteria
GTT
Asn
>WENV170634492
FYBJ01001485
147083
Alphaproteobacteria
GGG
Pro
>WENV170634324
FYBJ01000175
199865
Alphaproteobacteria
CAT
Met
>WENV170634405
FYBJ01001028
307050
Alphaproteobacteria
GGC
Ala
>WENV170634511
FYBJ01001572
147879
Alphaproteobacteria
TGG
Pro
>WENV170634570
FYBJ01002184
237740
Alphaproteobacteria
TTT
Lys
>WENV170634559
FYBJ01002107
237740
Alphaproteobacteria
TTT
Lys
>WENV170634522
FYBJ01001670
237740
Alphaproteobacteria
TTT
Lys
>WENV170634519
FYBJ01001628
237740
Alphaproteobacteria
TTT
Lys
>WENV170634426
FYBJ01001300
147876
Alphaproteobacteria
TCT
Arg
>WENV170634464
FYBJ01001407
357160
Alphaproteobacteria
TTC
Glu
>WENV170634484
FYBJ01001451
338757
Alphaproteobacteria
GAC
Val
>WENV170634337
FYBJ01000232
413626
Alphaproteobacteria
TCC
Gly
>WENV170634318
FYBJ01000165
194755
Alphaproteobacteria
CAT
Met
>WENV170634252
FYBJ01000026
151733
Alphaproteobacteria
GGG
Pro
>WENV170634385
FYBJ01000822
23650
Alphaproteobacteria
TGA
Ser
>WENV170634427
FYBJ01001305
23672
Alphaproteobacteria
GCT
Ser
>WENV170634390
FYBJ01000824
148083
Alphaproteobacteria
ACG
Arg
>WENV170634424
FYBJ01001254
339997
Alphaproteobacteria
TTG
Gln
>WENV170634408
FYBJ01001058
147877
Alphaproteobacteria
GTG
His
>WENV170634398
FYBJ01000955
23648
Alphaproteobacteria
CGA
Ser
>WENV170634557
FYBJ01002037
147085
Alphaproteobacteria
CCG
Arg
>WENV170634481
FYBJ01001448
147085
Alphaproteobacteria
CCG
Arg
>WENV170634402
FYBJ01001000
147085
Alphaproteobacteria
CCG
Arg
>WENV170634475
FYBJ01001430
255822
Alphaproteobacteria
CGT
Thr
>WENV170634526
FYBJ01001725
354623
Alphaproteobacteria
GAC
Val
>WENV170634353
FYBJ01000328
354623
Alphaproteobacteria
GAC
Val
>WENV170634561
FYBJ01002139
338760
Alphaproteobacteria
GAA
Phe
>WENV170634531
FYBJ01001749
338760
Alphaproteobacteria
GAA
Phe
>WENV170634411
FYBJ01001103
338760
Alphaproteobacteria
GAA
Phe
>WENV170634512
FYBJ01001611
421064
Alphaproteobacteria
CCC
Gly
>WENV170634271
FYBJ01000061
412281
Alphaproteobacteria
CTG
Gln
>WENV170634493
FYBJ01001489
177001
Alphaproteobacteria
TCT
Arg
>WENV170634550
FYBJ01001910
369678
Alphaproteobacteria
GGT
Thr
>WENV170634585
FYBJ01002378
338287
Alphaproteobacteria
GGT
Thr
>WENV170634472
FYBJ01001423
339606
Alphaproteobacteria
>WENV170634410
FYBJ01001072
339606
Alphaproteobacteria
>WENV170634462
FYBJ01001407
147289
Alphaproteobacteria
GTC
Asp
>WENV170634434
FYBJ01001386
377327
Alphaproteobacteria
GCC
Gly
>WENV170634505
FYBJ01001556
147286
Alphaproteobacteria
CGG
Pro
>WENV170634477
FYBJ01001439
147286
Alphaproteobacteria
CGG
Pro
>WENV170634401
FYBJ01000992
147286
Alphaproteobacteria
CGG
Pro
>WENV170634521
FYBJ01001667
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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