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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
107 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170658326
JTFP01087556
158433
Gammaproteobacteria
ACG
Arg
>WENV170657711
JTFP01011419
88666
Gammaproteobacteria
TGA
Ser
>WENV170658355
JTFP01092334
163310
Gammaproteobacteria
>WENV170658509
JTFP01128892
188985
Gammaproteobacteria
CAT
Met
>WENV170657771
JTFP01017814
189345
Gammaproteobacteria
ACG
Arg
>WENV170658051
JTFP01049275
189345
Gammaproteobacteria
ACG
Arg
>WENV170657995
JTFP01042239
188999
Gammaproteobacteria
>WENV170658015
JTFP01044246
188999
Gammaproteobacteria
>WENV170658434
JTFP01112493
177549
Gammaproteobacteria
CCG
Arg
>WENV170658743
JTFP01199175
188770
Gammaproteobacteria
GAT
Ile
>WENV170658284
JTFP01080934
307335
Gammaproteobacteria
TGT
Thr
>WENV170658078
JTFP01051810
68241
Gammaproteobacteria
CAG
Leu
>WENV170657962
JTFP01037478
160115
Gammaproteobacteria
GGG
Pro
>WENV170657996
JTFP01042239
161323
Gammaproteobacteria
TCT
Arg
>WENV170658684
JTFP01180372
161323
Gammaproteobacteria
TCT
Arg
>WENV170658310
JTFP01084531
270870
Gammaproteobacteria
GAA
Phe
>WENV170658042
JTFP01048338
370729
Gammaproteobacteria
CTG
Gln
>WENV170658096
JTFP01054642
370729
Gammaproteobacteria
CTG
Gln
>WENV170657911
JTFP01032682
105183
Gammaproteobacteria
CAA
Leu
>WENV170658232
JTFP01072926
318222
Gammaproteobacteria
TAC
Val
>WENV170658605
JTFP01160376
318222
Gammaproteobacteria
TAC
Val
>WENV170658607
JTFP01160376
318222
Gammaproteobacteria
TAC
Val
>WENV170658018
JTFP01045181
64782
Gammaproteobacteria
>WENV170658722
JTFP01190659
64782
Gammaproteobacteria
>WENV170658340
JTFP01090324
124568
Gammaproteobacteria
>WENV170657553
JTFP01001317
237101
Gammaproteobacteria
TGG
Pro
>WENV170657753
JTFP01014962
237101
Gammaproteobacteria
TGG
Pro
>WENV170658068
JTFP01050938
237101
Gammaproteobacteria
TGG
Pro
>WENV170658116
JTFP01056863
237101
Gammaproteobacteria
TGG
Pro
>WENV170658286
JTFP01081197
51187
Gammaproteobacteria
GGA
Ser
>WENV170658629
JTFP01164831
51187
Gammaproteobacteria
GGA
Ser
>WENV170657529
JTFP01000096
282403
Gammaproteobacteria
TTT
Lys
>WENV170657530
JTFP01000096
282403
Gammaproteobacteria
TTT
Lys
>WENV170658032
JTFP01047191
282403
Gammaproteobacteria
TTT
Lys
>WENV170658033
JTFP01047191
282403
Gammaproteobacteria
TTT
Lys
>WENV170658216
JTFP01068684
21668
Gammaproteobacteria
TGA
Ser
>WENV170658526
JTFP01133560
318368
Gammaproteobacteria
>WENV170657855
JTFP01026659
124620
Gammaproteobacteria
TAG
Leu
>WENV170658102
JTFP01054912
323258
Gammaproteobacteria
GCC
Gly
>WENV170657770
JTFP01017814
159115
Gammaproteobacteria
ACG
Arg
>WENV170657813
JTFP01022526
114922
Gammaproteobacteria
GTA
Tyr
>WENV170658429
JTFP01110985
256948
Gammaproteobacteria
GGT
Thr
>WENV170657535
JTFP01000352
305688
Gammaproteobacteria
TGC
Ala
>WENV170658538
JTFP01137120
305688
Gammaproteobacteria
TGC
Ala
>WENV170658675
JTFP01177601
305688
Gammaproteobacteria
TGC
Ala
>WENV170657795
JTFP01020671
118084
Gammaproteobacteria
TAG
Leu
>WENV170657725
JTFP01012387
260571
Gammaproteobacteria
TAC
Val
>WENV170658219
JTFP01069701
260571
Gammaproteobacteria
TAC
Val
>WENV170658221
JTFP01069701
260571
Gammaproteobacteria
TAC
Val
>WENV170658031
JTFP01047191
260453
Gammaproteobacteria
GTT
Asn
>WENV170658285
JTFP01080934
126541
Gammaproteobacteria
GTA
Tyr
>WENV170657831
JTFP01024457
26112
Gammaproteobacteria
GGA
Ser
>WENV170658122
JTFP01057142
256949
Gammaproteobacteria
GTG
His
>WENV170658479
JTFP01120355
158710
Gammaproteobacteria
CCG
Arg
>WENV170657990
JTFP01041874
258062
Gammaproteobacteria
GTG
His
>WENV170657992
JTFP01041874
258062
Gammaproteobacteria
GTG
His
>WENV170658054
JTFP01049275
7878
Gammaproteobacteria
GCT
Ser
>WENV170658430
JTFP01111145
7878
Gammaproteobacteria
GCT
Ser
>WENV170657971
JTFP01038499
159260
Gammaproteobacteria
CGG
Pro
>WENV170658322
JTFP01086984
159260
Gammaproteobacteria
CGG
Pro
>WENV170657836
JTFP01025269
291419
Gammaproteobacteria
TAC
Val
>WENV170658193
JTFP01067058
291419
Gammaproteobacteria
TAC
Val
>WENV170658195
JTFP01067058
291419
Gammaproteobacteria
TAC
Val
>WENV170658196
JTFP01067058
291419
Gammaproteobacteria
TAC
Val
>WENV170658198
JTFP01067058
291419
Gammaproteobacteria
TAC
Val
>WENV170658424
JTFP01110234
291419
Gammaproteobacteria
TAC
Val
>WENV170658426
JTFP01110234
291419
Gammaproteobacteria
TAC
Val
>WENV170658616
JTFP01163237
291419
Gammaproteobacteria
TAC
Val
>WENV170658089
JTFP01053786
159515
Gammaproteobacteria
GGG
Pro
>WENV170657904
JTFP01031738
159691
Gammaproteobacteria
CCT
Arg
>WENV170657604
JTFP01004696
90465
Gammaproteobacteria
CAG
Leu
>WENV170657796
JTFP01020671
105184
Gammaproteobacteria
>WENV170657916
JTFP01033014
105184
Gammaproteobacteria
>WENV170658320
JTFP01086846
105184
Gammaproteobacteria
>WENV170657588
JTFP01003773
481591
Gammaproteobacteria
CCC
Gly
>WENV170657549
JTFP01001195
18229
Gammaproteobacteria
TGA
Ser
>WENV170658144
JTFP01059573
166894
Gammaproteobacteria
TGG
Pro
>WENV170658312
JTFP01084634
158317
Gammaproteobacteria
CCG
Arg
>WENV170658508
JTFP01128603
257583
Gammaproteobacteria
GGT
Thr
>WENV170658580
JTFP01149766
159265
Gammaproteobacteria
>WENV170658524
JTFP01132948
289068
Gammaproteobacteria
TTC
Glu
>WENV170657736
JTFP01013234
105039
Gammaproteobacteria
>WENV170658728
JTFP01193176
171686
Gammaproteobacteria
CGG
Pro
>WENV170658531
JTFP01135228
257253
Gammaproteobacteria
>WENV170658174
JTFP01065586
291145
Gammaproteobacteria
TTC
Glu
>WENV170658653
JTFP01173695
291145
Gammaproteobacteria
TTC
Glu
>WENV170657910
JTFP01032623
158860
Gammaproteobacteria
GGG
Pro
>WENV170658120
JTFP01057112
256944
Gammaproteobacteria
GTT
Asn
>WENV170658471
JTFP01118264
256944
Gammaproteobacteria
GTT
Asn
>WENV170658473
JTFP01118264
256944
Gammaproteobacteria
GTT
Asn
>WENV170658460
JTFP01115858
160118
Gammaproteobacteria
GTT
Asn
>WENV170658461
JTFP01115858
160118
Gammaproteobacteria
GTT
Asn
>WENV170658321
JTFP01086846
368881
Gammaproteobacteria
>WENV170657582
JTFP01003451
257830
Gammaproteobacteria
>WENV170658371
JTFP01094248
159179
Gammaproteobacteria
>WENV170657970
JTFP01038477
282566
Gammaproteobacteria
GGT
Thr
>WENV170657780
JTFP01018938
210874
Gammaproteobacteria
TGG
Pro
>WENV170657991
JTFP01041874
210874
Gammaproteobacteria
TGG
Pro
>WENV170657993
JTFP01041874
210874
Gammaproteobacteria
TGG
Pro
>WENV170658121
JTFP01057142
210874
Gammaproteobacteria
TGG
Pro
>WENV170658092
JTFP01054209
410254
Gammaproteobacteria
TTG
Gln
>WENV170658093
JTFP01054209
410254
Gammaproteobacteria
TTG
Gln
>WENV170658462
JTFP01115952
166414
Gammaproteobacteria
>WENV170657853
JTFP01026659
391505
Gammaproteobacteria
TTG
Gln
>WENV170657793
JTFP01020335
257991
Gammaproteobacteria
GTT
Asn
>WENV170657937
JTFP01036084
257991
Gammaproteobacteria
GTT
Asn
>WENV170658418
JTFP01108944
257991
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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