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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
119 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170705696
LNAP01000136
4669
Alphaproteobacteria
GCT
Ser
>WENV170707209
LNAP01015124
148427
Alphaproteobacteria
TAC
Val
>WENV170707470
LNAP01021965
148427
Alphaproteobacteria
TAC
Val
>WENV170705849
LNAP01000483
339149
Alphaproteobacteria
GTT
Asn
>WENV170706131
LNAP01001271
339360
Alphaproteobacteria
>WENV170706520
LNAP01003850
339360
Alphaproteobacteria
>WENV170708397
LNAP01077943
96031
Alphaproteobacteria
TAG
Leu
>WENV170706277
LNAP01001821
194529
Alphaproteobacteria
TGG
Pro
>WENV170707644
LNAP01028292
194529
Alphaproteobacteria
TGG
Pro
>WENV170708342
LNAP01071503
24760
Alphaproteobacteria
TGA
Ser
>WENV170706124
LNAP01001234
342675
Alphaproteobacteria
TTG
Gln
>WENV170707312
LNAP01017079
239161
Alphaproteobacteria
TTT
Lys
>WENV170706188
LNAP01001589
239161
Alphaproteobacteria
TTT
Lys
>WENV170706932
LNAP01009174
146864
Alphaproteobacteria
TGG
Pro
>WENV170706669
LNAP01005321
146864
Alphaproteobacteria
TGG
Pro
>WENV170705935
LNAP01000679
146864
Alphaproteobacteria
TGG
Pro
>WENV170706639
LNAP01005019
37304
Alphaproteobacteria
TAA
Leu
>WENV170706132
LNAP01001273
37304
Alphaproteobacteria
TAA
Leu
>WENV170708204
LNAP01058463
148428
Alphaproteobacteria
TCT
Arg
>WENV170708070
LNAP01047791
148428
Alphaproteobacteria
TCT
Arg
>WENV170707533
LNAP01024162
148428
Alphaproteobacteria
TCT
Arg
>WENV170707006
LNAP01010782
148428
Alphaproteobacteria
TCT
Arg
>WENV170707616
LNAP01027412
338524
Alphaproteobacteria
CAC
Val
>WENV170708418
LNAP01079707
81064
Alphaproteobacteria
GTA
Tyr
>WENV170707491
LNAP01022514
375044
Alphaproteobacteria
GCC
Gly
>WENV170706731
LNAP01005930
375044
Alphaproteobacteria
GCC
Gly
>WENV170707360
LNAP01018615
343013
Alphaproteobacteria
TTC
Glu
>WENV170706276
LNAP01001821
343013
Alphaproteobacteria
TTC
Glu
>WENV170706148
LNAP01001376
352247
Alphaproteobacteria
TTG
Gln
>WENV170705756
LNAP01000203
352247
Alphaproteobacteria
TTG
Gln
>WENV170706686
LNAP01005578
81091
Alphaproteobacteria
GTA
Tyr
>WENV170708368
LNAP01074571
254188
Alphaproteobacteria
CCA
Trp
>WENV170706023
LNAP01000868
159426
Alphaproteobacteria
CAT
Met
>WENV170708042
LNAP01046028
340310
Alphaproteobacteria
CAC
Val
>WENV170707564
LNAP01025511
340310
Alphaproteobacteria
CAC
Val
>WENV170707254
LNAP01016186
340310
Alphaproteobacteria
CAC
Val
>WENV170705697
LNAP01000143
338496
Alphaproteobacteria
CAT
Met
>WENV170706570
LNAP01004313
339457
Alphaproteobacteria
>WENV170705848
LNAP01000483
412154
Alphaproteobacteria
GCA
Cys
>WENV170708280
LNAP01065155
148300
Alphaproteobacteria
CCA
Trp
>WENV170705609
LNAP01000015
146854
Alphaproteobacteria
CCT
Arg
>WENV170708243
LNAP01062007
146820
Alphaproteobacteria
CGG
Pro
>WENV170707597
LNAP01026678
146820
Alphaproteobacteria
CGG
Pro
>WENV170707596
LNAP01026678
146820
Alphaproteobacteria
CGG
Pro
>WENV170708379
LNAP01075372
95923
Alphaproteobacteria
TAG
Leu
>WENV170707469
LNAP01021965
95923
Alphaproteobacteria
TAG
Leu
>WENV170705919
LNAP01000619
95923
Alphaproteobacteria
TAG
Leu
>WENV170707332
LNAP01017773
148429
Alphaproteobacteria
CCT
Arg
>WENV170706202
LNAP01001657
148429
Alphaproteobacteria
CCT
Arg
>WENV170705922
LNAP01000622
148429
Alphaproteobacteria
CCT
Arg
>WENV170708554
LNAP01095387
278005
Alphaproteobacteria
>WENV170707638
LNAP01028075
95924
Alphaproteobacteria
GAG
Leu
>WENV170707636
LNAP01028063
95924
Alphaproteobacteria
GAG
Leu
>WENV170707179
LNAP01014498
95924
Alphaproteobacteria
GAG
Leu
>WENV170706730
LNAP01005918
95924
Alphaproteobacteria
GAG
Leu
>WENV170706139
LNAP01001317
95924
Alphaproteobacteria
GAG
Leu
>WENV170707893
LNAP01038097
59118
Alphaproteobacteria
CAG
Leu
>WENV170707407
LNAP01019740
59118
Alphaproteobacteria
CAG
Leu
>WENV170706955
LNAP01009708
59118
Alphaproteobacteria
CAG
Leu
>WENV170706929
LNAP01009106
59118
Alphaproteobacteria
CAG
Leu
>WENV170706123
LNAP01001231
59118
Alphaproteobacteria
CAG
Leu
>WENV170706047
LNAP01000981
59118
Alphaproteobacteria
CAG
Leu
>WENV170707201
LNAP01015056
129295
Alphaproteobacteria
GGG
Pro
>WENV170705830
LNAP01000421
256414
Alphaproteobacteria
CTT
Lys
>WENV170706185
LNAP01001560
97145
Alphaproteobacteria
TAG
Leu
>WENV170708429
LNAP01080505
350547
Alphaproteobacteria
GCC
Gly
>WENV170707455
LNAP01021312
350547
Alphaproteobacteria
GCC
Gly
>WENV170705900
LNAP01000598
350547
Alphaproteobacteria
GCC
Gly
>WENV170706905
LNAP01008749
412883
Alphaproteobacteria
GCA
Cys
>WENV170706314
LNAP01001998
412883
Alphaproteobacteria
GCA
Cys
>WENV170706966
LNAP01010005
164825
Alphaproteobacteria
GAT
Ile
>WENV170707675
LNAP01029168
341164
Alphaproteobacteria
GCC
Gly
>WENV170708419
LNAP01079717
289655
Alphaproteobacteria
GGC
Ala
>WENV170706609
LNAP01004614
289655
Alphaproteobacteria
GGC
Ala
>WENV170708130
LNAP01051545
239134
Alphaproteobacteria
CAT
Met
>WENV170707724
LNAP01031347
239134
Alphaproteobacteria
CAT
Met
>WENV170706465
LNAP01003258
239134
Alphaproteobacteria
CAT
Met
>WENV170706524
LNAP01003903
148854
Alphaproteobacteria
GTC
Asp
>WENV170706851
LNAP01007542
166801
Alphaproteobacteria
TCG
Arg
>WENV170706531
LNAP01003976
166801
Alphaproteobacteria
TCG
Arg
>WENV170706400
LNAP01002842
166801
Alphaproteobacteria
TCG
Arg
>WENV170706434
LNAP01003131
339465
Alphaproteobacteria
GGT
Thr
>WENV170706081
LNAP01001046
339465
Alphaproteobacteria
GGT
Thr
>WENV170705620
LNAP01000024
339465
Alphaproteobacteria
GGT
Thr
>WENV170705633
LNAP01000036
237479
Alphaproteobacteria
TTT
Lys
>WENV170708380
LNAP01075442
370641
Alphaproteobacteria
GCC
Gly
>WENV170706279
LNAP01001832
23611
Alphaproteobacteria
CGA
Ser
>WENV170706099
LNAP01001095
23611
Alphaproteobacteria
CGA
Ser
>WENV170705757
LNAP01000207
23611
Alphaproteobacteria
CGA
Ser
>WENV170707240
LNAP01015860
96322
Alphaproteobacteria
CAA
Leu
>WENV170706977
LNAP01010207
412153
Alphaproteobacteria
CTG
Gln
>WENV170706569
LNAP01004305
412153
Alphaproteobacteria
CTG
Gln
>WENV170705853
LNAP01000495
160158
Alphaproteobacteria
GAT
Ile
>WENV170707764
LNAP01032958
239160
Alphaproteobacteria
CGT
Thr
>WENV170706114
LNAP01001183
239160
Alphaproteobacteria
CGT
Thr
>WENV170705623
LNAP01000026
152444
Alphaproteobacteria
GGG
Pro
>WENV170706764
LNAP01006325
339464
Alphaproteobacteria
GCC
Gly
>WENV170706589
LNAP01004468
339464
Alphaproteobacteria
GCC
Gly
>WENV170706221
LNAP01001732
339464
Alphaproteobacteria
GCC
Gly
>WENV170706133
LNAP01001275
339464
Alphaproteobacteria
GCC
Gly
>WENV170707098
LNAP01012683
95925
Alphaproteobacteria
CAA
Leu
>WENV170706812
LNAP01007103
95925
Alphaproteobacteria
CAA
Leu
>WENV170706820
LNAP01007203
103325
Alphaproteobacteria
CAG
Leu
>WENV170706633
LNAP01004942
237474
Alphaproteobacteria
CCA
Trp
>WENV170706399
LNAP01002834
237474
Alphaproteobacteria
CCA
Trp
>WENV170706180
LNAP01001556
237474
Alphaproteobacteria
CCA
Trp
>WENV170705780
LNAP01000271
146852
Alphaproteobacteria
GTC
Asp
>WENV170706886
LNAP01008309
259072
Alphaproteobacteria
CGC
Ala
>WENV170706483
LNAP01003451
259072
Alphaproteobacteria
CGC
Ala
>WENV170706113
LNAP01001183
259072
Alphaproteobacteria
CGC
Ala
>WENV170706110
LNAP01001170
259072
Alphaproteobacteria
CGC
Ala
>WENV170707416
LNAP01020032
7030
Alphaproteobacteria
GCT
Ser
>WENV170707607
LNAP01027167
342846
Alphaproteobacteria
GAC
Val
>WENV170707105
LNAP01012768
342846
Alphaproteobacteria
GAC
Val
>WENV170706621
LNAP01004810
342846
Alphaproteobacteria
GAC
Val
>WENV170705920
LNAP01000619
146851
Alphaproteobacteria
TAC
Val
>WENV170706688
LNAP01005639
345469
Alphaproteobacteria
TGT
Thr
>WENV170705953
LNAP01000700
345469
Alphaproteobacteria
TGT
Thr
>WENV170707529
LNAP01023935
146915
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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