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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
185 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170706565
LNAP01004242
152317
Gammaproteobacteria
CAT
Met
>WENV170706205
LNAP01001682
235837
Gammaproteobacteria
GTT
Asn
>WENV170706292
LNAP01001890
235837
Gammaproteobacteria
GTT
Asn
>WENV170706317
LNAP01002021
235837
Gammaproteobacteria
GTT
Asn
>WENV170706867
LNAP01007821
235837
Gammaproteobacteria
GTT
Asn
>WENV170707313
LNAP01017178
235837
Gammaproteobacteria
GTT
Asn
>WENV170707318
LNAP01017269
235837
Gammaproteobacteria
GTT
Asn
>WENV170707486
LNAP01022436
235837
Gammaproteobacteria
GTT
Asn
>WENV170707655
LNAP01028526
235837
Gammaproteobacteria
GTT
Asn
>WENV170708605
LNAP01099431
235837
Gammaproteobacteria
GTT
Asn
>WENV170708667
LNAP01101463
235837
Gammaproteobacteria
GTT
Asn
>WENV170708691
LNAP01102263
235837
Gammaproteobacteria
GTT
Asn
>WENV170706223
LNAP01001740
23426
Gammaproteobacteria
GGA
Ser
>WENV170706748
LNAP01006085
58813
Gammaproteobacteria
CAG
Leu
>WENV170706749
LNAP01006085
58813
Gammaproteobacteria
CAG
Leu
>WENV170707603
LNAP01026941
95633
Gammaproteobacteria
GTA
Tyr
>WENV170706201
LNAP01001650
47140
Gammaproteobacteria
TGA
Ser
>WENV170707773
LNAP01033253
26165
Gammaproteobacteria
GGA
Ser
>WENV170706384
LNAP01002698
26165
Gammaproteobacteria
GGA
Ser
>WENV170705846
LNAP01000479
26165
Gammaproteobacteria
GGA
Ser
>WENV170707514
LNAP01023550
412119
Gammaproteobacteria
CTG
Gln
>WENV170705790
LNAP01000308
24443
Gammaproteobacteria
GGA
Ser
>WENV170708624
LNAP01099939
58812
Gammaproteobacteria
TAA
Leu
>WENV170708401
LNAP01078543
58812
Gammaproteobacteria
TAA
Leu
>WENV170708291
LNAP01066254
58812
Gammaproteobacteria
TAA
Leu
>WENV170708244
LNAP01062213
58812
Gammaproteobacteria
TAA
Leu
>WENV170708054
LNAP01046728
58812
Gammaproteobacteria
TAA
Leu
>WENV170707167
LNAP01014180
58812
Gammaproteobacteria
TAA
Leu
>WENV170706768
LNAP01006362
58812
Gammaproteobacteria
TAA
Leu
>WENV170706747
LNAP01006083
58812
Gammaproteobacteria
TAA
Leu
>WENV170706610
LNAP01004627
58812
Gammaproteobacteria
TAA
Leu
>WENV170706329
LNAP01002099
58812
Gammaproteobacteria
TAA
Leu
>WENV170706126
LNAP01001249
58812
Gammaproteobacteria
TAA
Leu
>WENV170705864
LNAP01000509
58812
Gammaproteobacteria
TAA
Leu
>WENV170705668
LNAP01000100
58812
Gammaproteobacteria
TAA
Leu
>WENV170705656
LNAP01000074
58812
Gammaproteobacteria
TAA
Leu
>WENV170708229
LNAP01060931
168586
Gammaproteobacteria
GAT
Ile
>WENV170707920
LNAP01039904
27773
Gammaproteobacteria
GGA
Ser
>WENV170708546
LNAP01094243
279763
Gammaproteobacteria
TGT
Thr
>WENV170707590
LNAP01026338
279763
Gammaproteobacteria
TGT
Thr
>WENV170707338
LNAP01017939
279763
Gammaproteobacteria
TGT
Thr
>WENV170707171
LNAP01014232
279763
Gammaproteobacteria
TGT
Thr
>WENV170706635
LNAP01004956
279763
Gammaproteobacteria
TGT
Thr
>WENV170706471
LNAP01003341
279763
Gammaproteobacteria
TGT
Thr
>WENV170706349
LNAP01002304
279763
Gammaproteobacteria
TGT
Thr
>WENV170708151
LNAP01053748
279763
Gammaproteobacteria
TGT
Thr
>WENV170706053
LNAP01001010
235516
Gammaproteobacteria
GTG
His
>WENV170706912
LNAP01008856
190805
Gammaproteobacteria
CCG
Arg
>WENV170706604
LNAP01004573
190805
Gammaproteobacteria
CCG
Arg
>WENV170706497
LNAP01003595
190805
Gammaproteobacteria
CCG
Arg
>WENV170706488
LNAP01003506
190805
Gammaproteobacteria
CCG
Arg
>WENV170707921
LNAP01039904
25914
Gammaproteobacteria
GGA
Ser
>WENV170706899
LNAP01008596
16301
Gammaproteobacteria
TGA
Ser
>WENV170706646
LNAP01005126
16301
Gammaproteobacteria
TGA
Ser
>WENV170706149
LNAP01001388
16301
Gammaproteobacteria
TGA
Ser
>WENV170706030
LNAP01000909
16301
Gammaproteobacteria
TGA
Ser
>WENV170707744
LNAP01032054
6885
Gammaproteobacteria
GCT
Ser
>WENV170706939
LNAP01009396
6885
Gammaproteobacteria
GCT
Ser
>WENV170706704
LNAP01005753
6885
Gammaproteobacteria
GCT
Ser
>WENV170706203
LNAP01001665
144981
Gammaproteobacteria
CCG
Arg
>WENV170706108
LNAP01001157
347865
Gammaproteobacteria
>WENV170707882
LNAP01037794
339731
Gammaproteobacteria
CTG
Gln
>WENV170707599
LNAP01026719
339731
Gammaproteobacteria
CTG
Gln
>WENV170707045
LNAP01011607
412505
Gammaproteobacteria
GCA
Cys
>WENV170708293
LNAP01066444
2129
Gammaproteobacteria
>WENV170707026
LNAP01011086
144979
Gammaproteobacteria
CGG
Pro
>WENV170707022
LNAP01011061
144979
Gammaproteobacteria
CGG
Pro
>WENV170707666
LNAP01028936
238674
Gammaproteobacteria
TGT
Thr
>WENV170707409
LNAP01019753
238674
Gammaproteobacteria
TGT
Thr
>WENV170707612
LNAP01027269
85327
Gammaproteobacteria
TAA
Leu
>WENV170706659
LNAP01005262
27506
Gammaproteobacteria
GGA
Ser
>WENV170707087
LNAP01012289
411594
Gammaproteobacteria
TCC
Gly
>WENV170707277
LNAP01016595
190084
Gammaproteobacteria
CCT
Arg
>WENV170707236
LNAP01015808
190084
Gammaproteobacteria
CCT
Arg
>WENV170708111
LNAP01050743
238559
Gammaproteobacteria
CTT
Lys
>WENV170708250
LNAP01062915
162709
Gammaproteobacteria
CCT
Arg
>WENV170708623
LNAP01099939
426758
Gammaproteobacteria
GCA
Cys
>WENV170708009
LNAP01043951
426758
Gammaproteobacteria
GCA
Cys
>WENV170707792
LNAP01034291
426758
Gammaproteobacteria
GCA
Cys
>WENV170707448
LNAP01021204
426758
Gammaproteobacteria
GCA
Cys
>WENV170706746
LNAP01006083
426758
Gammaproteobacteria
GCA
Cys
>WENV170708574
LNAP01098709
95576
Gammaproteobacteria
TAG
Leu
>WENV170706543
LNAP01004047
249963
Gammaproteobacteria
GGT
Thr
>WENV170708431
LNAP01081262
279806
Gammaproteobacteria
TGT
Thr
>WENV170708350
LNAP01071911
279806
Gammaproteobacteria
TGT
Thr
>WENV170708058
LNAP01046947
279806
Gammaproteobacteria
TGT
Thr
>WENV170708056
LNAP01046786
279806
Gammaproteobacteria
TGT
Thr
>WENV170707906
LNAP01038931
279806
Gammaproteobacteria
TGT
Thr
>WENV170707795
LNAP01034341
279806
Gammaproteobacteria
TGT
Thr
>WENV170706895
LNAP01008471
279806
Gammaproteobacteria
TGT
Thr
>WENV170706409
LNAP01002964
279806
Gammaproteobacteria
TGT
Thr
>WENV170705918
LNAP01000613
279806
Gammaproteobacteria
TGT
Thr
>WENV170705998
LNAP01000805
2169
Gammaproteobacteria
>WENV170708520
LNAP01090605
145335
Gammaproteobacteria
GGG
Pro
>WENV170708081
LNAP01048775
145335
Gammaproteobacteria
GGG
Pro
>WENV170707828
LNAP01035506
145335
Gammaproteobacteria
GGG
Pro
>WENV170707678
LNAP01029221
145335
Gammaproteobacteria
GGG
Pro
>WENV170707551
LNAP01025165
145335
Gammaproteobacteria
GGG
Pro
>WENV170707437
LNAP01020747
145335
Gammaproteobacteria
GGG
Pro
>WENV170707330
LNAP01017654
145335
Gammaproteobacteria
GGG
Pro
>WENV170706917
LNAP01008989
145335
Gammaproteobacteria
GGG
Pro
>WENV170706535
LNAP01003998
145335
Gammaproteobacteria
GGG
Pro
>WENV170706391
LNAP01002784
145335
Gammaproteobacteria
GGG
Pro
>WENV170706176
LNAP01001526
145335
Gammaproteobacteria
GGG
Pro
>WENV170706019
LNAP01000846
145335
Gammaproteobacteria
GGG
Pro
>WENV170705985
LNAP01000783
145335
Gammaproteobacteria
GGG
Pro
>WENV170705832
LNAP01000434
145335
Gammaproteobacteria
GGG
Pro
>WENV170705760
LNAP01000212
145335
Gammaproteobacteria
GGG
Pro
>WENV170708592
LNAP01099079
145335
Gammaproteobacteria
GGG
Pro
>WENV170708577
LNAP01098893
145335
Gammaproteobacteria
GGG
Pro
>WENV170706597
LNAP01004493
426403
Gammaproteobacteria
GCA
Cys
>WENV170707595
LNAP01026580
176058
Gammaproteobacteria
CAT
Met
>WENV170707444
LNAP01021027
145562
Gammaproteobacteria
CAT
Met
>WENV170707399
LNAP01019531
145562
Gammaproteobacteria
CAT
Met
>WENV170706549
LNAP01004145
145562
Gammaproteobacteria
CAT
Met
>WENV170706540
LNAP01004041
145562
Gammaproteobacteria
CAT
Met
>WENV170705678
LNAP01000116
264771
Gammaproteobacteria
GTG
His
>WENV170708684
LNAP01101991
95635
Gammaproteobacteria
CAA
Leu
>WENV170708224
LNAP01060304
235512
Gammaproteobacteria
GGT
Thr
>WENV170707710
LNAP01030664
235512
Gammaproteobacteria
GGT
Thr
>WENV170707605
LNAP01026941
235512
Gammaproteobacteria
GGT
Thr
>WENV170706893
LNAP01008467
95729
Gammaproteobacteria
TAG
Leu
>WENV170707833
LNAP01035908
266908
Gammaproteobacteria
CGC
Ala
>WENV170707623
LNAP01027702
266908
Gammaproteobacteria
CGC
Ala
>WENV170706722
LNAP01005879
266908
Gammaproteobacteria
CGC
Ala
>WENV170708464
LNAP01084727
412511
Gammaproteobacteria
GCA
Cys
>WENV170706328
LNAP01002099
412511
Gammaproteobacteria
GCA
Cys
>WENV170705667
LNAP01000100
412511
Gammaproteobacteria
GCA
Cys
>WENV170706551
LNAP01004170
62501
Gammaproteobacteria
CAG
Leu
>WENV170708563
LNAP01095901
269152
Gammaproteobacteria
GTG
His
>WENV170706318
LNAP01002045
269152
Gammaproteobacteria
GTG
His
>WENV170707645
LNAP01028297
85328
Gammaproteobacteria
CAG
Leu
>WENV170706162
LNAP01001472
58815
Gammaproteobacteria
CAA
Leu
>WENV170705882
LNAP01000566
23429
Gammaproteobacteria
GGA
Ser
>WENV170707952
LNAP01041544
95735
Gammaproteobacteria
CAA
Leu
>WENV170708559
LNAP01095640
411725
Gammaproteobacteria
CCC
Gly
>WENV170708304
LNAP01067242
411725
Gammaproteobacteria
CCC
Gly
>WENV170708302
LNAP01067077
411725
Gammaproteobacteria
CCC
Gly
>WENV170708282
LNAP01065312
411725
Gammaproteobacteria
CCC
Gly
>WENV170707953
LNAP01041563
411725
Gammaproteobacteria
CCC
Gly
>WENV170706956
LNAP01009720
411725
Gammaproteobacteria
CCC
Gly
>WENV170706952
LNAP01009695
411725
Gammaproteobacteria
CCC
Gly
>WENV170706757
LNAP01006170
411725
Gammaproteobacteria
CCC
Gly
>WENV170706687
LNAP01005629
411725
Gammaproteobacteria
CCC
Gly
>WENV170706178
LNAP01001544
411725
Gammaproteobacteria
CCC
Gly
>WENV170706130
LNAP01001264
411725
Gammaproteobacteria
CCC
Gly
>WENV170706125
LNAP01001235
411725
Gammaproteobacteria
CCC
Gly
>WENV170705894
LNAP01000580
411725
Gammaproteobacteria
CCC
Gly
>WENV170705658
LNAP01000078
411725
Gammaproteobacteria
CCC
Gly
>WENV170706058
LNAP01001018
175661
Gammaproteobacteria
ACG
Arg
>WENV170706057
LNAP01001018
175661
Gammaproteobacteria
ACG
Arg
>WENV170706702
LNAP01005735
7000
Gammaproteobacteria
TAT
Ile
>WENV170706481
LNAP01003440
7000
Gammaproteobacteria
TAT
Ile
>WENV170707804
LNAP01034601
266765
Gammaproteobacteria
TTT
Lys
>WENV170706735
LNAP01005945
58859
Gammaproteobacteria
CAG
Leu
>WENV170705840
LNAP01000455
353410
Gammaproteobacteria
CTG
Gln
>WENV170708120
LNAP01051074
156545
Gammaproteobacteria
TCT
Arg
>WENV170707628
LNAP01027796
156545
Gammaproteobacteria
TCT
Arg
>WENV170707283
LNAP01016707
156545
Gammaproteobacteria
TCT
Arg
>WENV170706853
LNAP01007562
156545
Gammaproteobacteria
TCT
Arg
>WENV170708113
LNAP01050806
146908
Gammaproteobacteria
GGG
Pro
>WENV170708669
LNAP01101525
16238
Gammaproteobacteria
CGA
Ser
>WENV170707758
LNAP01032773
16238
Gammaproteobacteria
CGA
Ser
>WENV170707340
LNAP01017998
16238
Gammaproteobacteria
CGA
Ser
>WENV170705959
LNAP01000704
16238
Gammaproteobacteria
CGA
Ser
>WENV170708007
LNAP01043943
347440
Gammaproteobacteria
CAC
Val
>WENV170706568
LNAP01004285
144800
Gammaproteobacteria
>WENV170706326
LNAP01002096
144800
Gammaproteobacteria
>WENV170707689
LNAP01029712
144736
Gammaproteobacteria
ACG
Arg
>WENV170707688
LNAP01029712
144736
Gammaproteobacteria
ACG
Arg
>WENV170708299
LNAP01066948
237687
Gammaproteobacteria
TGT
Thr
>WENV170706464
LNAP01003257
145000
Gammaproteobacteria
GTC
Asp
>WENV170707741
LNAP01031853
44927
Gammaproteobacteria
TGA
Ser
>WENV170707632
LNAP01027908
44927
Gammaproteobacteria
TGA
Ser
>WENV170707471
LNAP01021970
44927
Gammaproteobacteria
TGA
Ser
>WENV170707072
LNAP01012159
44927
Gammaproteobacteria
TGA
Ser
>WENV170706472
LNAP01003357
44927
Gammaproteobacteria
TGA
Ser
>WENV170706115
LNAP01001184
44927
Gammaproteobacteria
TGA
Ser
>WENV170705797
LNAP01000346
44927
Gammaproteobacteria
TGA
Ser
>WENV170705724
LNAP01000150
44927
Gammaproteobacteria
TGA
Ser
>WENV170707780
LNAP01033838
276263
Gammaproteobacteria
TGC
Ala
>WENV170706229
LNAP01001760
24403
Gammaproteobacteria
TGA
Ser
>WENV170706373
LNAP01002611
67362
Gammaproteobacteria
TAA
Leu
>WENV170706518
LNAP01003818
145334
Gammaproteobacteria
CCG
Arg
>WENV170705993
LNAP01000791
411785
Gammaproteobacteria
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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