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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170762233
LUMW01002683
381459
Alphaproteobacteria
CAC
Val
>WENV170762592
LUMW01017226
412259
Alphaproteobacteria
CTG
Gln
>WENV170762199
LUMW01002062
365250
Alphaproteobacteria
GCC
Gly
>WENV170761887
LUMW01000053
412798
Alphaproteobacteria
CTG
Gln
>WENV170762438
LUMW01008638
80917
Alphaproteobacteria
CAG
Leu
>WENV170762429
LUMW01008215
59361
Alphaproteobacteria
GAG
Leu
>WENV170762302
LUMW01004372
147089
Alphaproteobacteria
ACG
Arg
>WENV170762190
LUMW01001934
412917
Alphaproteobacteria
TCC
Gly
>WENV170762150
LUMW01001377
237489
Alphaproteobacteria
CAT
Met
>WENV170762087
LUMW01000796
159305
Alphaproteobacteria
GTC
Asp
>WENV170762539
LUMW01013565
23468
Alphaproteobacteria
GCT
Ser
>WENV170762608
LUMW01018595
185438
Alphaproteobacteria
GAT
Ile
>WENV170762370
LUMW01006574
176908
Alphaproteobacteria
GTC
Asp
>WENV170762369
LUMW01006574
176908
Alphaproteobacteria
GTC
Asp
>WENV170762243
LUMW01002966
239119
Alphaproteobacteria
CGT
Thr
>WENV170762426
LUMW01008125
23671
Alphaproteobacteria
CGA
Ser
>WENV170762587
LUMW01016878
237197
Alphaproteobacteria
CCA
Trp
>WENV170762354
LUMW01006184
339723
Alphaproteobacteria
>WENV170762227
LUMW01002550
147083
Alphaproteobacteria
GGG
Pro
>WENV170762014
LUMW01000449
16408
Alphaproteobacteria
GGA
Ser
>WENV170762022
LUMW01000487
95928
Alphaproteobacteria
TAG
Leu
>WENV170762437
LUMW01008529
31506
Alphaproteobacteria
TGA
Ser
>WENV170762792
LUMW01040416
147879
Alphaproteobacteria
TGG
Pro
>WENV170762533
LUMW01013342
147879
Alphaproteobacteria
TGG
Pro
>WENV170762643
LUMW01020937
339722
Alphaproteobacteria
TTG
Gln
>WENV170762287
LUMW01004064
237740
Alphaproteobacteria
TTT
Lys
>WENV170762286
LUMW01004063
80918
Alphaproteobacteria
GAG
Leu
>WENV170762624
LUMW01019449
147876
Alphaproteobacteria
TCT
Arg
>WENV170762408
LUMW01007357
281594
Alphaproteobacteria
TGT
Thr
>WENV170762540
LUMW01013577
113716
Alphaproteobacteria
CAA
Leu
>WENV170762052
LUMW01000596
258175
Alphaproteobacteria
CGC
Ala
>WENV170761978
LUMW01000279
167926
Alphaproteobacteria
CAT
Met
>WENV170762695
LUMW01027227
23648
Alphaproteobacteria
CGA
Ser
>WENV170762547
LUMW01014248
23648
Alphaproteobacteria
CGA
Ser
>WENV170761885
LUMW01000049
65244
Alphaproteobacteria
CAG
Leu
>WENV170762699
LUMW01028063
412477
Alphaproteobacteria
GCA
Cys
>WENV170762239
LUMW01002801
338760
Alphaproteobacteria
GAA
Phe
>WENV170762468
LUMW01010240
338288
Alphaproteobacteria
TTC
Glu
>WENV170761956
LUMW01000204
369678
Alphaproteobacteria
GGT
Thr
>WENV170762535
LUMW01013393
339606
Alphaproteobacteria
>WENV170762272
LUMW01003761
339606
Alphaproteobacteria
>WENV170762009
LUMW01000407
29831
Alphaproteobacteria
TGA
Ser
>WENV170762359
LUMW01006494
113715
Alphaproteobacteria
TAG
Leu
>WENV170762168
LUMW01001643
113715
Alphaproteobacteria
TAG
Leu
>WENV170762263
LUMW01003594
377327
Alphaproteobacteria
GCC
Gly
>WENV170762507
LUMW01012233
59202
Alphaproteobacteria
TAA
Leu
>WENV170762343
LUMW01005845
236256
Alphaproteobacteria
TAC
Val
>WENV170761995
LUMW01000349
191695
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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