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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170770509
LXNH01108712
387387
Cyanobacteriota
GAC
Val
>WENV170767890
LXNH01007555
366531
Cyanobacteriota
TTG
Gln
>WENV170769454
LXNH01054820
45941
Cyanobacteriota
CGA
Ser
>WENV170767336
LXNH01000708
373624
Cyanobacteriota
TTG
Gln
>WENV170767486
LXNH01001998
373624
Cyanobacteriota
TTG
Gln
>WENV170768046
LXNH01010868
373624
Cyanobacteriota
TTG
Gln
>WENV170768652
LXNH01025829
237009
Cyanobacteriota
GGC
Ala
>WENV170769163
LXNH01044287
267489
Cyanobacteriota
GGC
Ala
>WENV170770526
LXNH01109889
267489
Cyanobacteriota
GGC
Ala
>WENV170769851
LXNH01073134
306125
Cyanobacteriota
GTG
His
>WENV170769817
LXNH01071794
306125
Cyanobacteriota
GTG
His
>WENV170768797
LXNH01030641
306125
Cyanobacteriota
GTG
His
>WENV170768161
LXNH01013001
306125
Cyanobacteriota
GTG
His
>WENV170767812
LXNH01006327
164907
Cyanobacteriota
GGG
Pro
>WENV170769770
LXNH01069432
339686
Cyanobacteriota
TAC
Val
>WENV170767402
LXNH01001200
339686
Cyanobacteriota
TAC
Val
>WENV170770130
LXNH01087824
96363
Cyanobacteriota
TAG
Leu
>WENV170769975
LXNH01079196
96363
Cyanobacteriota
TAG
Leu
>WENV170770524
LXNH01109773
25356
Cyanobacteriota
GGA
Ser
>WENV170767880
LXNH01007429
25356
Cyanobacteriota
GGA
Ser
>WENV170768493
LXNH01021274
338782
Cyanobacteriota
GTT
Asn
>WENV170770609
LXNH01114556
23668
Cyanobacteriota
TGA
Ser
>WENV170770405
LXNH01102355
23668
Cyanobacteriota
TGA
Ser
>WENV170769253
LXNH01047598
23668
Cyanobacteriota
TGA
Ser
>WENV170768972
LXNH01036907
23668
Cyanobacteriota
TGA
Ser
>WENV170769732
LXNH01067146
245150
Cyanobacteriota
GTG
His
>WENV170769777
LXNH01069727
363933
Cyanobacteriota
GTT
Asn
>WENV170769882
LXNH01074789
237899
Cyanobacteriota
CCA
Trp
>WENV170769036
LXNH01039896
237899
Cyanobacteriota
CCA
Trp
>WENV170768912
LXNH01034745
237899
Cyanobacteriota
CCA
Trp
>WENV170768635
LXNH01025216
237899
Cyanobacteriota
CCA
Trp
>WENV170767587
LXNH01003216
237899
Cyanobacteriota
CCA
Trp
>WENV170767320
LXNH01000579
237899
Cyanobacteriota
CCA
Trp
>WENV170767287
LXNH01000364
153717
Cyanobacteriota
CAT
Met
>WENV170770135
LXNH01088462
344607
Cyanobacteriota
CCC
Gly
>WENV170767758
LXNH01005509
305373
Cyanobacteriota
CGC
Ala
>WENV170769402
LXNH01053445
339688
Cyanobacteriota
GAC
Val
>WENV170768763
LXNH01029605
339688
Cyanobacteriota
GAC
Val
>WENV170768164
LXNH01013044
339688
Cyanobacteriota
GAC
Val
>WENV170768684
LXNH01026912
162346
Cyanobacteriota
GGG
Pro
>WENV170770419
LXNH01103141
148812
Cyanobacteriota
CGG
Pro
>WENV170770190
LXNH01091026
148812
Cyanobacteriota
CGG
Pro
>WENV170768109
LXNH01011938
148812
Cyanobacteriota
CGG
Pro
>WENV170769883
LXNH01074789
190971
Cyanobacteriota
GTC
Asp
>WENV170769586
LXNH01060929
190971
Cyanobacteriota
GTC
Asp
>WENV170768636
LXNH01025216
190971
Cyanobacteriota
GTC
Asp
>WENV170767588
LXNH01003216
190971
Cyanobacteriota
GTC
Asp
>WENV170770553
LXNH01111114
80908
Cyanobacteriota
CAA
Leu
>WENV170769758
LXNH01068750
80908
Cyanobacteriota
CAA
Leu
>WENV170769080
LXNH01041540
80908
Cyanobacteriota
CAA
Leu
>WENV170767365
LXNH01000892
80908
Cyanobacteriota
CAA
Leu
>WENV170769779
LXNH01069749
101255
Cyanobacteriota
TAG
Leu
>WENV170768126
LXNH01012179
101255
Cyanobacteriota
TAG
Leu
>WENV170768035
LXNH01010655
101255
Cyanobacteriota
TAG
Leu
>WENV170767709
LXNH01004765
101255
Cyanobacteriota
TAG
Leu
>WENV170769984
LXNH01079754
11030
Cyanobacteriota
GCT
Ser
>WENV170769465
LXNH01055473
11030
Cyanobacteriota
GCT
Ser
>WENV170768515
LXNH01022222
11030
Cyanobacteriota
GCT
Ser
>WENV170767680
LXNH01004389
11030
Cyanobacteriota
GCT
Ser
>WENV170767539
LXNH01002646
11030
Cyanobacteriota
GCT
Ser
>WENV170769306
LXNH01049527
153480
Cyanobacteriota
CAT
Met
>WENV170767469
LXNH01001839
37223
Cyanobacteriota
TAA
Leu
>WENV170770432
LXNH01103957
379587
Cyanobacteriota
GTT
Asn
>WENV170768612
LXNH01024700
379587
Cyanobacteriota
GTT
Asn
>WENV170769480
LXNH01056003
339061
Cyanobacteriota
CAC
Val
>WENV170768376
LXNH01018213
240100
Cyanobacteriota
CAT
Met
>WENV170769574
LXNH01059921
95762
Cyanobacteriota
AAG
Leu
>WENV170767436
LXNH01001553
188100
Cyanobacteriota
CCG
Arg
>WENV170768166
LXNH01013156
147238
Cyanobacteriota
CCG
Arg
>WENV170770132
LXNH01087850
341034
Cyanobacteriota
GGT
Thr
>WENV170769251
LXNH01047504
153271
Cyanobacteriota
TCT
Arg
>WENV170769079
LXNH01041540
68425
Cyanobacteriota
CAG
Leu
>WENV170768917
LXNH01034881
68425
Cyanobacteriota
CAG
Leu
>WENV170768805
LXNH01030824
68425
Cyanobacteriota
CAG
Leu
>WENV170767371
LXNH01000930
68425
Cyanobacteriota
CAG
Leu
>WENV170767366
LXNH01000892
68425
Cyanobacteriota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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