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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170976909
MTKZ01014066
434062
Actinomycetota
GCA
Cys
>WENV170976414
MTKZ01007497
295152
Actinomycetota
GTT
Asn
>WENV170976908
MTKZ01014066
338763
Actinomycetota
GCC
Gly
>WENV170979384
MTKZ01088115
121519
Actinomycetota
TTG
Gln
>WENV170975419
MTKZ01000530
147155
Actinomycetota
GTC
Asp
>WENV170979524
MTKZ01095218
390230
Actinomycetota
CCG
Arg
>WENV170979745
MTKZ01105356
390230
Actinomycetota
CCG
Arg
>WENV170979743
MTKZ01105260
361079
Actinomycetota
CTG
Gln
>WENV170979953
MTKZ01117040
239843
Actinomycetota
GGC
Ala
>WENV170975812
MTKZ01002503
284377
Actinomycetota
GTG
His
>WENV170979841
MTKZ01110547
255841
Actinomycetota
CCA
Trp
>WENV170977876
MTKZ01034267
255841
Actinomycetota
CCA
Trp
>WENV170979262
MTKZ01082953
246789
Actinomycetota
CCT
Arg
>WENV170977089
MTKZ01016878
146607
Actinomycetota
GTC
Asp
>WENV170979632
MTKZ01099824
416034
Actinomycetota
TCC
Gly
>WENV170977699
MTKZ01029499
61791
Actinomycetota
GAG
Leu
>WENV170979402
MTKZ01088720
45451
Actinomycetota
GGA
Ser
>WENV170979749
MTKZ01105537
162442
Actinomycetota
GAT
Ile
>WENV170979522
MTKZ01095213
162442
Actinomycetota
GAT
Ile
>WENV170979347
MTKZ01085833
246299
Actinomycetota
CTT
Lys
>WENV170976338
MTKZ01006793
16376
Actinomycetota
CGA
Ser
>WENV170979529
MTKZ01095344
421345
Actinomycetota
CCC
Gly
>WENV170979112
MTKZ01076353
260797
Actinomycetota
GTG
His
>WENV170979535
MTKZ01095571
266832
Actinomycetota
GTT
Asn
>WENV170975405
MTKZ01000437
243274
Actinomycetota
GGT
Thr
>WENV170979633
MTKZ01099824
152011
Actinomycetota
TGG
Pro
>WENV170976849
MTKZ01013166
152216
Actinomycetota
GAT
Ile
>WENV170975994
MTKZ01003698
267445
Actinomycetota
GGT
Thr
>WENV170975811
MTKZ01002503
166960
Actinomycetota
TCT
Arg
>WENV170978809
MTKZ01062797
412879
Actinomycetota
TCC
Gly
>WENV170978542
MTKZ01053650
251503
Actinomycetota
GTT
Asn
>WENV170977213
MTKZ01018700
254531
Actinomycetota
>WENV170976021
MTKZ01003870
254531
Actinomycetota
>WENV170975596
MTKZ01001413
254531
Actinomycetota
>WENV170978630
MTKZ01056689
81941
Actinomycetota
CAG
Leu
>WENV170977130
MTKZ01017262
269372
Actinomycetota
CCA
Trp
>WENV170979954
MTKZ01117086
82645
Actinomycetota
GAG
Leu
>WENV170977797
MTKZ01031808
183544
Actinomycetota
CAT
Met
>WENV170979834
MTKZ01110152
237812
Actinomycetota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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