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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170977797
MTKZ01031808
160677
Actinomycetota
>WENV170979384
MTKZ01088115
133296
Actinomycetota
>WENV170979077
MTKZ01074512
282070
Actinomycetota
ACG
Arg
>WENV170979970
MTKZ01118159
88987
Actinomycetota
CAA
Leu
>WENV170979650
MTKZ01101122
195088
Actinomycetota
CAC
Val
>WENV170979050
MTKZ01073508
374812
Actinomycetota
CAC
Val
>WENV170979407
MTKZ01088734
194311
Actinomycetota
CAT
Met
>WENV170977876
MTKZ01034267
260427
Actinomycetota
CCA
Trp
>WENV170979643
MTKZ01100535
260427
Actinomycetota
CCA
Trp
>WENV170979841
MTKZ01110547
260427
Actinomycetota
CCA
Trp
>WENV170976226
MTKZ01005859
452415
Actinomycetota
CCC
Gly
>WENV170978501
MTKZ01052015
369238
Actinomycetota
CCG
Arg
>WENV170979157
MTKZ01078182
305391
Actinomycetota
CCG
Arg
>WENV170979524
MTKZ01095218
372643
Actinomycetota
CCG
Arg
>WENV170979745
MTKZ01105356
391118
Actinomycetota
CCG
Arg
>WENV170977416
MTKZ01022791
256995
Actinomycetota
CGC
Ala
>WENV170978076
MTKZ01040015
257209
Actinomycetota
CTC
Glu
>WENV170979834
MTKZ01110152
257209
Actinomycetota
CTC
Glu
>WENV170979743
MTKZ01105260
377409
Actinomycetota
CTG
Gln
>WENV170979833
MTKZ01110152
383365
Actinomycetota
CTG
Gln
>WENV170977699
MTKZ01029499
67104
Actinomycetota
GAG
Leu
>WENV170979792
MTKZ01107613
52256
Actinomycetota
GAG
Leu
>WENV170979954
MTKZ01117086
88940
Actinomycetota
GAG
Leu
>WENV170979522
MTKZ01095213
185340
Actinomycetota
GAT
Ile
>WENV170979749
MTKZ01105537
185340
Actinomycetota
GAT
Ile
>WENV170979338
MTKZ01085114
49736
Actinomycetota
GGA
Ser
>WENV170979402
MTKZ01088720
50770
Actinomycetota
GGA
Ser
>WENV170979953
MTKZ01117040
258820
Actinomycetota
GGC
Ala
>WENV170975878
MTKZ01002927
170033
Actinomycetota
GGG
Pro
>WENV170975405
MTKZ01000437
268768
Actinomycetota
GGT
Thr
>WENV170977050
MTKZ01016280
105635
Actinomycetota
GTA
Tyr
>WENV170975419
MTKZ01000530
158583
Actinomycetota
GTC
Asp
>WENV170977089
MTKZ01016878
158778
Actinomycetota
GTC
Asp
>WENV170975812
MTKZ01002503
256966
Actinomycetota
GTG
His
>WENV170978272
MTKZ01045115
268949
Actinomycetota
GTT
Asn
>WENV170976414
MTKZ01007497
258145
Actinomycetota
GTT
Asn
>WENV170979535
MTKZ01095571
258795
Actinomycetota
GTT
Asn
>WENV170975500
MTKZ01000941
201621
Actinomycetota
TAA
Leu
>WENV170975621
MTKZ01001568
170057
Actinomycetota
TAC
Val
>WENV170978809
MTKZ01062797
452272
Actinomycetota
TCC
Gly
>WENV170975811
MTKZ01002503
201635
Actinomycetota
TCT
Arg
>WENV170975553
MTKZ01001227
53904
Actinomycetota
TGA
Ser
>WENV170977774
MTKZ01031221
52065
Actinomycetota
TGA
Ser
>WENV170979381
MTKZ01087832
133378
Actinomycetota
TTG
Gln
>WENV170975509
MTKZ01000941
377758
Actinomycetota
TTG
Gln
>WENV170977655
MTKZ01028509
257045
Actinomycetota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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