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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180126703
OATA01000018
235097
Bacteroidota
TTT
Lys
>WENV180126787
OATA01000067
235097
Bacteroidota
TTT
Lys
>WENV180126882
OATA01000134
235097
Bacteroidota
TTT
Lys
>WENV180127242
OATA01000654
235102
Bacteroidota
CGT
Thr
>WENV180127738
OATA01004268
144657
Bacteroidota
CGG
Pro
>WENV180127200
OATA01000555
243025
Bacteroidota
CAT
Met
>WENV180126642
OATA01000003
338155
Bacteroidota
CTC
Glu
>WENV180126807
OATA01000080
338155
Bacteroidota
CTC
Glu
>WENV180127130
OATA01000408
338155
Bacteroidota
CTC
Glu
>WENV180127508
OATA01001665
343138
Bacteroidota
CCT
Arg
>WENV180127582
OATA01002193
58715
Bacteroidota
GAG
Leu
>WENV180127257
OATA01000683
17323
Bacteroidota
GGA
Ser
>WENV180126649
OATA01000005
95618
Bacteroidota
TAG
Leu
>WENV180127922
OATA01010198
338486
Bacteroidota
CAT
Met
>WENV180126814
OATA01000087
415410
Bacteroidota
TTG
Gln
>WENV180126637
OATA01000001
415410
Bacteroidota
TTG
Gln
>WENV180126663
OATA01000009
411543
Bacteroidota
CTG
Gln
>WENV180127581
OATA01002193
59689
Bacteroidota
CAG
Leu
>WENV180127016
OATA01000259
344692
Bacteroidota
GGT
Thr
>WENV180126833
OATA01000102
235182
Bacteroidota
>WENV180127313
OATA01000846
341950
Bacteroidota
>WENV180126911
OATA01000164
272983
Bacteroidota
CGT
Thr
>WENV180126775
OATA01000056
338124
Bacteroidota
CCG
Arg
>WENV180127615
OATA01002483
238121
Bacteroidota
CTT
Lys
>WENV180127614
OATA01002483
238121
Bacteroidota
CTT
Lys
>WENV180127111
OATA01000393
126641
Bacteroidota
TAC
Val
>WENV180127110
OATA01000393
126641
Bacteroidota
TAC
Val
>WENV180127619
OATA01002505
338132
Bacteroidota
GCA
Cys
>WENV180127330
OATA01000895
338132
Bacteroidota
GCA
Cys
>WENV180126976
OATA01000222
338132
Bacteroidota
GCA
Cys
>WENV180126764
OATA01000049
338132
Bacteroidota
GCA
Cys
>WENV180126753
OATA01000040
338132
Bacteroidota
GCA
Cys
>WENV180126712
OATA01000023
144688
Bacteroidota
CAT
Met
>WENV180127616
OATA01002483
45423
Bacteroidota
TGA
Ser
>WENV180126880
OATA01000131
193809
Bacteroidota
CAT
Met
>WENV180126735
OATA01000033
181746
Bacteroidota
GGC
Ala
>WENV180127715
OATA01003871
58714
Bacteroidota
CAA
Leu
>WENV180127126
OATA01000404
144933
Bacteroidota
TCT
Arg
>WENV180126784
OATA01000062
144933
Bacteroidota
TCT
Arg
>WENV180126914
OATA01000168
144656
Bacteroidota
GTG
His
>WENV180126955
OATA01000199
235207
Bacteroidota
CAT
Met
>WENV180127968
OATA01016098
144659
Bacteroidota
GTG
His
>WENV180127739
OATA01004268
235180
Bacteroidota
CCA
Trp
>WENV180126900
OATA01000147
144596
Bacteroidota
GGC
Ala
>WENV180126761
OATA01000045
80607
Bacteroidota
GTA
Tyr
>WENV180128144
OATA01056991
80607
Bacteroidota
GTA
Tyr
>WENV180128105
OATA01041681
80607
Bacteroidota
GTA
Tyr
>WENV180127075
OATA01000325
80607
Bacteroidota
GTA
Tyr
>WENV180126960
OATA01000203
80607
Bacteroidota
GTA
Tyr
>WENV180127432
OATA01001300
113604
Bacteroidota
>WENV180127429
OATA01001300
113604
Bacteroidota
>WENV180127607
OATA01002409
80614
Bacteroidota
>WENV180127263
OATA01000704
52358
Bacteroidota
TGA
Ser
>WENV180127046
OATA01000292
52358
Bacteroidota
TGA
Ser
>WENV180126752
OATA01000040
52358
Bacteroidota
TGA
Ser
>WENV180126638
OATA01000002
52358
Bacteroidota
TGA
Ser
>WENV180127815
OATA01005997
52358
Bacteroidota
TGA
Ser
>WENV180127342
OATA01000929
52358
Bacteroidota
TGA
Ser
>WENV180127356
OATA01000988
154643
Bacteroidota
CAT
Met
>WENV180126958
OATA01000203
144590
Bacteroidota
GTT
Asn
>WENV180126957
OATA01000203
144590
Bacteroidota
GTT
Asn
>WENV180126808
OATA01000081
95559
Bacteroidota
TAG
Leu
>WENV180126704
OATA01000018
419272
Bacteroidota
CTG
Gln
>WENV180126791
OATA01000071
144655
Bacteroidota
GGC
Ala
>WENV180127509
OATA01001665
338164
Bacteroidota
TTC
Glu
>WENV180127490
OATA01001572
95875
Bacteroidota
TAG
Leu
>WENV180126713
OATA01000023
338314
Bacteroidota
CCT
Arg
>WENV180127859
OATA01007572
240012
Bacteroidota
CCC
Gly
>WENV180126731
OATA01000028
44852
Bacteroidota
TAA
Leu
>WENV180127762
OATA01004648
147439
Bacteroidota
TCT
Arg
>WENV180127858
OATA01007515
411550
Bacteroidota
CTG
Gln
>WENV180128185
OATA01092237
338165
Bacteroidota
GGT
Thr
>WENV180126639
OATA01000002
19528
Bacteroidota
GGA
Ser
>WENV180127013
OATA01000257
50727
Bacteroidota
TGA
Ser
>WENV180126818
OATA01000089
132360
Bacteroidota
GGG
Pro
>WENV180126702
OATA01000018
132360
Bacteroidota
GGG
Pro
>WENV180126662
OATA01000009
132360
Bacteroidota
GGG
Pro
>WENV180126817
OATA01000089
425638
Bacteroidota
CTG
Gln
>WENV180126767
OATA01000051
425638
Bacteroidota
CTG
Gln
>WENV180126657
OATA01000007
425638
Bacteroidota
CTG
Gln
>WENV180127142
OATA01000424
239647
Bacteroidota
TTT
Lys
>WENV180126951
OATA01000196
239647
Bacteroidota
TTT
Lys
>WENV180127014
OATA01000257
19317
Bacteroidota
GGA
Ser
>WENV180126821
OATA01000095
19317
Bacteroidota
GGA
Ser
>WENV180126756
OATA01000042
19317
Bacteroidota
GGA
Ser
>WENV180127903
OATA01008569
185921
Bacteroidota
GTC
Asp
>WENV180127129
OATA01000408
23696
Bacteroidota
GCT
Ser
>WENV180126806
OATA01000080
23696
Bacteroidota
GCT
Ser
>WENV180127160
OATA01000494
414426
Bacteroidota
CTG
Gln
>WENV180126915
OATA01000168
16224
Bacteroidota
GGA
Ser
>WENV180126705
OATA01000018
16220
Bacteroidota
GGA
Ser
>WENV180128125
OATA01048474
338125
Bacteroidota
CCT
Arg
>WENV180127580
OATA01002193
235129
Bacteroidota
GCC
Gly
>WENV180127243
OATA01000656
411629
Bacteroidota
TTG
Gln
>WENV180127058
OATA01000304
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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