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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180132151
OATH01001667
235146
Actinomycetota
CGT
Thr
>WENV180131979
OATH01000523
119475
Actinomycetota
TAA
Leu
>WENV180132198
OATH01002389
235347
Actinomycetota
GGC
Ala
>WENV180132199
OATH01002389
235347
Actinomycetota
GGC
Ala
>WENV180131835
OATH01000171
144589
Actinomycetota
ACG
Arg
>WENV180131836
OATH01000171
144589
Actinomycetota
ACG
Arg
>WENV180132244
OATH01003607
16400
Actinomycetota
GAG
Leu
>WENV180131975
OATH01000500
123202
Actinomycetota
ACG
Arg
>WENV180131811
OATH01000131
37070
Actinomycetota
CGA
Ser
>WENV180132159
OATH01001717
201717
Actinomycetota
CTT
Lys
>WENV180132087
OATH01001059
201717
Actinomycetota
CTT
Lys
>WENV180132145
OATH01001595
144600
Actinomycetota
TGG
Pro
>WENV180132011
OATH01000698
235092
Actinomycetota
CCG
Arg
>WENV180132176
OATH01002082
235194
Actinomycetota
GTG
His
>WENV180132196
OATH01002326
411601
Actinomycetota
CCC
Gly
>WENV180132102
OATH01001163
174149
Actinomycetota
GAT
Ile
>WENV180132226
OATH01003084
338239
Actinomycetota
TTC
Glu
>WENV180132147
OATH01001627
338239
Actinomycetota
TTC
Glu
>WENV180131812
OATH01000131
16219
Actinomycetota
GCT
Ser
>WENV180132103
OATH01001163
235174
Actinomycetota
TGC
Ala
>WENV180132068
OATH01000884
235174
Actinomycetota
TGC
Ala
>WENV180131831
OATH01000168
235174
Actinomycetota
TGC
Ala
>WENV180131987
OATH01000586
235101
Actinomycetota
TTT
Lys
>WENV180132292
OATH01017890
121510
Actinomycetota
TAA
Leu
>WENV180132135
OATH01001497
144625
Actinomycetota
GTC
Asp
>WENV180132133
OATH01001497
144625
Actinomycetota
GTC
Asp
>WENV180132175
OATH01002078
44855
Actinomycetota
TGA
Ser
>WENV180132210
OATH01002767
145345
Actinomycetota
TAC
Val
>WENV180132253
OATH01004544
235199
Actinomycetota
CAC
Val
>WENV180132187
OATH01002214
235199
Actinomycetota
CAC
Val
>WENV180132105
OATH01001225
44862
Actinomycetota
CGA
Ser
>WENV180132018
OATH01000726
198659
Actinomycetota
TAC
Val
>WENV180131808
OATH01000129
16223
Actinomycetota
GAG
Leu
>WENV180131983
OATH01000552
144593
Actinomycetota
TAT
Ile
>WENV180132143
OATH01001578
144700
Actinomycetota
CAT
Met
>WENV180132211
OATH01002778
243671
Actinomycetota
CTC
Glu
>WENV180132044
OATH01000859
243671
Actinomycetota
CTC
Glu
>WENV180132179
OATH01002113
45147
Actinomycetota
CGA
Ser
>WENV180131809
OATH01000131
98279
Actinomycetota
GTA
Tyr
>WENV180132212
OATH01002778
338148
Actinomycetota
CTG
Gln
>WENV180132045
OATH01000859
338148
Actinomycetota
CTG
Gln
>WENV180131815
OATH01000136
338148
Actinomycetota
CTG
Gln
>WENV180131708
OATH01000037
235148
Actinomycetota
GTT
Asn
>WENV180131702
OATH01000037
235148
Actinomycetota
GTT
Asn
>WENV180132046
OATH01000859
53078
Actinomycetota
GGA
Ser
>WENV180132223
OATH01002907
237792
Actinomycetota
CCT
Arg
>WENV180132239
OATH01003402
338238
Actinomycetota
CCA
Trp
>WENV180132163
OATH01001848
113702
Actinomycetota
TAA
Leu
>WENV180132122
OATH01001371
176456
Actinomycetota
TCT
Arg
>WENV180132200
OATH01002447
144825
Actinomycetota
CAT
Met
>WENV180132041
OATH01000844
235348
Actinomycetota
CCT
Arg
>WENV180132056
OATH01000870
37521
Actinomycetota
GCT
Ser
>WENV180132256
OATH01004634
237794
Actinomycetota
CCG
Arg
>WENV180132036
OATH01000832
411554
Actinomycetota
CCC
Gly
>WENV180131866
OATH01000242
411554
Actinomycetota
CCC
Gly
>WENV180132150
OATH01001667
113601
Actinomycetota
TAG
Leu
>WENV180132248
OATH01004240
144595
Actinomycetota
CAA
Leu
>WENV180132167
OATH01001923
144595
Actinomycetota
CAA
Leu
>WENV180131911
OATH01000328
144595
Actinomycetota
CAA
Leu
>WENV180131707
OATH01000037
145343
Actinomycetota
GGG
Pro
>WENV180132069
OATH01000899
235149
Actinomycetota
CCT
Arg
>WENV180132249
OATH01004254
51286
Actinomycetota
TGA
Ser
>WENV180132149
OATH01001667
235121
Actinomycetota
CGT
Thr
>WENV180131912
OATH01000328
144635
Actinomycetota
TGG
Pro
>WENV180132037
OATH01000832
80622
Actinomycetota
CAG
Leu
>WENV180131867
OATH01000242
80622
Actinomycetota
CAG
Leu
>WENV180131998
OATH01000647
44851
Actinomycetota
TGA
Ser
>WENV180132251
OATH01004409
163948
Actinomycetota
CAT
Met
>WENV180131832
OATH01000168
235173
Actinomycetota
GGC
Ala
>WENV180131701
OATH01000037
235173
Actinomycetota
GGC
Ala
>WENV180132261
OATH01005142
243162
Actinomycetota
GTT
Asn
>WENV180132177
OATH01002104
243162
Actinomycetota
GTT
Asn
>WENV180132162
OATH01001813
243162
Actinomycetota
GTT
Asn
>WENV180132132
OATH01001491
243162
Actinomycetota
GTT
Asn
>WENV180132141
OATH01001560
144660
Actinomycetota
TAC
Val
>WENV180132148
OATH01001628
278447
Actinomycetota
GTG
His
>WENV180132259
OATH01005069
95593
Actinomycetota
>WENV180132142
OATH01001578
95593
Actinomycetota
>WENV180132224
OATH01003001
144823
Actinomycetota
TCT
Arg
>WENV180132170
OATH01001958
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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