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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180194771
OAZY01000117
243647
Bacillota
TTT
Lys
>WENV180194620
OAZY01000022
16842
Bacillota
CGA
Ser
>WENV180195040
OAZY01000848
16842
Bacillota
CGA
Ser
>WENV180195332
OAZY01017665
18465
Bacillota
GCT
Ser
>WENV180195381
OAZY01035505
80838
Bacillota
GTA
Tyr
>WENV180195241
OAZY01004273
237285
Bacillota
TGT
Thr
>WENV180194638
OAZY01000027
339856
Bacillota
CCA
Trp
>WENV180195324
OAZY01014729
295019
Bacillota
TGC
Ala
>WENV180195253
OAZY01005713
235137
Bacillota
TGC
Ala
>WENV180194849
OAZY01000200
391536
Bacillota
TTC
Glu
>WENV180194542
OAZY01000001
391536
Bacillota
TTC
Glu
>WENV180194655
OAZY01000037
340802
Bacillota
TTG
Gln
>WENV180195308
OAZY01012565
338143
Bacillota
CTC
Glu
>WENV180194921
OAZY01000417
302152
Bacillota
CTT
Lys
>WENV180194920
OAZY01000417
302152
Bacillota
CTT
Lys
>WENV180195289
OAZY01009664
412107
Bacillota
TCC
Gly
>WENV180194753
OAZY01000107
429429
Bacillota
CCA
Trp
>WENV180195230
OAZY01004197
322812
Bacillota
TGT
Thr
>WENV180194548
OAZY01000003
313454
Bacillota
GAA
Phe
>WENV180194883
OAZY01000289
16834
Bacillota
GCT
Ser
>WENV180194783
OAZY01000128
16834
Bacillota
GCT
Ser
>WENV180195240
OAZY01004273
186380
Bacillota
GTC
Asp
>WENV180194654
OAZY01000037
156937
Bacillota
GTG
His
>WENV180194848
OAZY01000200
243646
Bacillota
GTT
Asn
>WENV180194774
OAZY01000122
114002
Bacillota
CAA
Leu
>WENV180194715
OAZY01000062
114002
Bacillota
CAA
Leu
>WENV180195053
OAZY01000938
37437
Bacillota
TAA
Leu
>WENV180195102
OAZY01001375
96360
Bacillota
GTA
Tyr
>WENV180194563
OAZY01000006
96360
Bacillota
GTA
Tyr
>WENV180194850
OAZY01000200
243612
Bacillota
TAC
Val
>WENV180194543
OAZY01000001
243612
Bacillota
TAC
Val
>WENV180194868
OAZY01000242
37269
Bacillota
TGA
Ser
>WENV180195216
OAZY01003544
258936
Bacillota
GGT
Thr
>WENV180194834
OAZY01000182
173810
Bacillota
CAT
Met
>WENV180194582
OAZY01000011
152492
Bacillota
GGG
Pro
>WENV180194595
OAZY01000018
147135
Bacillota
ACG
Arg
>WENV180195292
OAZY01009664
339364
Bacillota
TTG
Gln
>WENV180194549
OAZY01000003
147684
Bacillota
ACG
Arg
>WENV180194865
OAZY01000239
342895
Bacillota
CAT
Met
>WENV180194599
OAZY01000018
342895
Bacillota
CAT
Met
>WENV180194683
OAZY01000045
314670
Bacillota
GAA
Phe
>WENV180194617
OAZY01000022
194150
Bacillota
TGG
Pro
>WENV180195323
OAZY01014729
198159
Bacillota
CAT
Met
>WENV180194653
OAZY01000037
152151
Bacillota
TCT
Arg
>WENV180195392
OAZY01040761
250349
Bacillota
GAA
Phe
>WENV180195073
OAZY01001073
235701
Bacillota
TTT
Lys
>WENV180195099
OAZY01001375
339391
Bacillota
TTC
Glu
>WENV180194804
OAZY01000135
339391
Bacillota
TTC
Glu
>WENV180194875
OAZY01000265
235197
Bacillota
GTC
Asp
>WENV180194614
OAZY01000022
235197
Bacillota
GTC
Asp
>WENV180194586
OAZY01000014
235197
Bacillota
GTC
Asp
>WENV180195127
OAZY01001628
368876
Bacillota
GCC
Gly
>WENV180195087
OAZY01001285
368876
Bacillota
GCC
Gly
>WENV180194588
OAZY01000014
368876
Bacillota
GCC
Gly
>WENV180195291
OAZY01009664
237287
Bacillota
GTG
His
>WENV180195382
OAZY01035505
237284
Bacillota
TAC
Val
>WENV180195239
OAZY01004273
237284
Bacillota
TAC
Val
>WENV180195071
OAZY01001073
243613
Bacillota
GTG
His
>WENV180194769
OAZY01000117
243613
Bacillota
GTG
His
>WENV180195290
OAZY01009664
145469
Bacillota
TCT
Arg
>WENV180195298
OAZY01010112
152491
Bacillota
CAT
Met
>WENV180195238
OAZY01004273
353527
Bacillota
TTC
Glu
>WENV180195209
OAZY01003096
170245
Bacillota
CAT
Met
>WENV180195294
OAZY01010112
273029
Bacillota
TGT
Thr
>WENV180195297
OAZY01010112
281472
Bacillota
GGT
Thr
>WENV180194619
OAZY01000022
178024
Bacillota
TCT
Arg
>WENV180195331
OAZY01017665
16361
Bacillota
TGA
Ser
>WENV180195148
OAZY01002002
413657
Bacillota
CCC
Gly
>WENV180195086
OAZY01001278
413657
Bacillota
CCC
Gly
>WENV180195128
OAZY01001628
287034
Bacillota
GTT
Asn
>WENV180194541
OAZY01000001
287034
Bacillota
GTT
Asn
>WENV180195390
OAZY01040717
7065
Bacillota
GCT
Ser
>WENV180195072
OAZY01001073
343027
Bacillota
TTG
Gln
>WENV180194770
OAZY01000117
343027
Bacillota
TTG
Gln
>WENV180195309
OAZY01012900
237283
Bacillota
TTT
Lys
>WENV180195293
OAZY01009664
237283
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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