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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
109 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180218972
OBAS01000010
235097
Bacteroidota
TTT
Lys
>WENV180219156
OBAS01000082
235097
Bacteroidota
TTT
Lys
>WENV180219193
OBAS01000125
235097
Bacteroidota
TTT
Lys
>WENV180219491
OBAS01000567
235097
Bacteroidota
TTT
Lys
>WENV180219552
OBAS01000778
235097
Bacteroidota
TTT
Lys
>WENV180219623
OBAS01001160
235097
Bacteroidota
TTT
Lys
>WENV180219684
OBAS01001708
235097
Bacteroidota
TTT
Lys
>WENV180219796
OBAS01003554
235097
Bacteroidota
TTT
Lys
>WENV180219934
OBAS01006763
235102
Bacteroidota
CGT
Thr
>WENV180219922
OBAS01006354
267954
Bacteroidota
GCC
Gly
>WENV180220240
OBAS01029536
144657
Bacteroidota
CGG
Pro
>WENV180219259
OBAS01000169
243025
Bacteroidota
CAT
Met
>WENV180219837
OBAS01004402
243025
Bacteroidota
CAT
Met
>WENV180220147
OBAS01018900
338155
Bacteroidota
CTC
Glu
>WENV180220234
OBAS01028804
153993
Bacteroidota
GAT
Ile
>WENV180219216
OBAS01000132
343138
Bacteroidota
CCT
Arg
>WENV180220391
OBAS01058721
46165
Bacteroidota
TGA
Ser
>WENV180219537
OBAS01000708
17323
Bacteroidota
GGA
Ser
>WENV180220092
OBAS01013976
95618
Bacteroidota
TAG
Leu
>WENV180219352
OBAS01000272
136244
Bacteroidota
TAC
Val
>WENV180219302
OBAS01000207
411543
Bacteroidota
CTG
Gln
>WENV180220210
OBAS01025869
59689
Bacteroidota
CAG
Leu
>WENV180219574
OBAS01000895
436206
Bacteroidota
TTG
Gln
>WENV180219170
OBAS01000101
436206
Bacteroidota
TTG
Gln
>WENV180220381
OBAS01056774
20893
Bacteroidota
GGA
Ser
>WENV180220019
OBAS01010184
344692
Bacteroidota
GGT
Thr
>WENV180219171
OBAS01000102
145504
Bacteroidota
TGT
Thr
>WENV180219921
OBAS01006303
338124
Bacteroidota
CCG
Arg
>WENV180219969
OBAS01007957
126641
Bacteroidota
TAC
Val
>WENV180220098
OBAS01014467
338132
Bacteroidota
GCA
Cys
>WENV180219477
OBAS01000536
338132
Bacteroidota
GCA
Cys
>WENV180219117
OBAS01000058
338132
Bacteroidota
GCA
Cys
>WENV180219967
OBAS01007926
144688
Bacteroidota
CAT
Met
>WENV180220474
OBAS01094019
193809
Bacteroidota
CAT
Met
>WENV180219988
OBAS01008556
181746
Bacteroidota
GGC
Ala
>WENV180219850
OBAS01004639
235165
Bacteroidota
CCA
Trp
>WENV180219804
OBAS01003667
301449
Bacteroidota
CGG
Pro
>WENV180219670
OBAS01001576
301449
Bacteroidota
CGG
Pro
>WENV180219663
OBAS01001556
301449
Bacteroidota
CGG
Pro
>WENV180219549
OBAS01000753
301449
Bacteroidota
CGG
Pro
>WENV180219377
OBAS01000312
301449
Bacteroidota
CGG
Pro
>WENV180219098
OBAS01000051
301449
Bacteroidota
CGG
Pro
>WENV180220064
OBAS01012691
144933
Bacteroidota
TCT
Arg
>WENV180219540
OBAS01000721
303954
Bacteroidota
GCC
Gly
>WENV180219288
OBAS01000199
303954
Bacteroidota
GCC
Gly
>WENV180219287
OBAS01000199
303954
Bacteroidota
GCC
Gly
>WENV180220072
OBAS01013080
144656
Bacteroidota
GTG
His
>WENV180219575
OBAS01000897
235207
Bacteroidota
CAT
Met
>WENV180219393
OBAS01000359
235207
Bacteroidota
CAT
Met
>WENV180219280
OBAS01000194
144659
Bacteroidota
GTG
His
>WENV180220225
OBAS01027532
235180
Bacteroidota
CCA
Trp
>WENV180220449
OBAS01079135
80607
Bacteroidota
GTA
Tyr
>WENV180220206
OBAS01025580
80607
Bacteroidota
GTA
Tyr
>WENV180219641
OBAS01001285
80607
Bacteroidota
GTA
Tyr
>WENV180219564
OBAS01000854
80607
Bacteroidota
GTA
Tyr
>WENV180220351
OBAS01050584
16999
Bacteroidota
GGA
Ser
>WENV180220331
OBAS01045948
80614
Bacteroidota
>WENV180219499
OBAS01000594
154643
Bacteroidota
CAT
Met
>WENV180219711
OBAS01002269
144590
Bacteroidota
GTT
Asn
>WENV180219710
OBAS01002269
144590
Bacteroidota
GTT
Asn
>WENV180219096
OBAS01000050
144590
Bacteroidota
GTT
Asn
>WENV180219095
OBAS01000050
144590
Bacteroidota
GTT
Asn
>WENV180220114
OBAS01015705
95559
Bacteroidota
TAG
Leu
>WENV180219810
OBAS01003761
95559
Bacteroidota
TAG
Leu
>WENV180219986
OBAS01008527
419272
Bacteroidota
CTG
Gln
>WENV180219960
OBAS01007753
144655
Bacteroidota
GGC
Ala
>WENV180219662
OBAS01001555
144655
Bacteroidota
GGC
Ala
>WENV180219283
OBAS01000196
144639
Bacteroidota
GGC
Ala
>WENV180220047
OBAS01011706
95875
Bacteroidota
TAG
Leu
>WENV180219652
OBAS01001391
338314
Bacteroidota
CCT
Arg
>WENV180220145
OBAS01018428
139743
Bacteroidota
GGG
Pro
>WENV180220014
OBAS01009987
139743
Bacteroidota
GGG
Pro
>WENV180219998
OBAS01009257
139743
Bacteroidota
GGG
Pro
>WENV180219773
OBAS01003180
139743
Bacteroidota
GGG
Pro
>WENV180219225
OBAS01000140
139743
Bacteroidota
GGG
Pro
>WENV180219180
OBAS01000112
139743
Bacteroidota
GGG
Pro
>WENV180220026
OBAS01010363
240012
Bacteroidota
CCC
Gly
>WENV180219744
OBAS01002711
44852
Bacteroidota
TAA
Leu
>WENV180219251
OBAS01000161
44852
Bacteroidota
TAA
Leu
>WENV180219101
OBAS01000051
44852
Bacteroidota
TAA
Leu
>WENV180220070
OBAS01013058
147439
Bacteroidota
TCT
Arg
>WENV180219795
OBAS01003545
280513
Bacteroidota
TTT
Lys
>WENV180219563
OBAS01000849
150485
Bacteroidota
GTT
Asn
>WENV180219562
OBAS01000849
150485
Bacteroidota
GTT
Asn
>WENV180220062
OBAS01012191
411550
Bacteroidota
CTG
Gln
>WENV180219130
OBAS01000064
19528
Bacteroidota
GGA
Ser
>WENV180220368
OBAS01054363
425638
Bacteroidota
CTG
Gln
>WENV180219534
OBAS01000694
425638
Bacteroidota
CTG
Gln
>WENV180219450
OBAS01000460
425638
Bacteroidota
CTG
Gln
>WENV180218974
OBAS01000010
425638
Bacteroidota
CTG
Gln
>WENV180220471
OBAS01089047
19317
Bacteroidota
GGA
Ser
>WENV180219996
OBAS01009023
19317
Bacteroidota
GGA
Ser
>WENV180219632
OBAS01001199
353927
Bacteroidota
TTC
Glu
>WENV180219265
OBAS01000174
353927
Bacteroidota
TTC
Glu
>WENV180220084
OBAS01013680
139062
Bacteroidota
TGG
Pro
>WENV180219984
OBAS01008407
23696
Bacteroidota
GCT
Ser
>WENV180219694
OBAS01001883
414426
Bacteroidota
CTG
Gln
>WENV180219536
OBAS01000703
414426
Bacteroidota
CTG
Gln
>WENV180220010
OBAS01009825
55270
Bacteroidota
TGA
Ser
>WENV180219381
OBAS01000321
55270
Bacteroidota
TGA
Ser
>WENV180219358
OBAS01000289
55270
Bacteroidota
TGA
Ser
>WENV180219306
OBAS01000212
16224
Bacteroidota
GGA
Ser
>WENV180220404
OBAS01061935
16220
Bacteroidota
GGA
Ser
>WENV180219880
OBAS01005299
338125
Bacteroidota
CCT
Arg
>WENV180219218
OBAS01000133
338125
Bacteroidota
CCT
Arg
>WENV180219107
OBAS01000054
338125
Bacteroidota
CCT
Arg
>WENV180220301
OBAS01039475
235129
Bacteroidota
GCC
Gly
>WENV180220167
OBAS01021793
411629
Bacteroidota
TTG
Gln
>WENV180219957
OBAS01007565
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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