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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180297837
OBJA01097146
338269
Alphaproteobacteria
GTT
Asn
>WENV180296410
OBJA01000473
126988
Alphaproteobacteria
GGG
Pro
>WENV180297731
OBJA01072565
365250
Alphaproteobacteria
GCC
Gly
>WENV180298803
OBJA01630429
412798
Alphaproteobacteria
CTG
Gln
>WENV180297972
OBJA01126959
237800
Alphaproteobacteria
>WENV180298459
OBJA01355155
417750
Alphaproteobacteria
TCC
Gly
>WENV180298471
OBJA01362935
237489
Alphaproteobacteria
CAT
Met
>WENV180297750
OBJA01078576
147152
Alphaproteobacteria
ACG
Arg
>WENV180297910
OBJA01111219
66752
Alphaproteobacteria
CAG
Leu
>WENV180298128
OBJA01180915
339325
Alphaproteobacteria
CAC
Val
>WENV180298767
OBJA01591908
338286
Alphaproteobacteria
TTG
Gln
>WENV180298928
OBJA01794543
338282
Alphaproteobacteria
GTT
Asn
>WENV180298537
OBJA01402170
368245
Alphaproteobacteria
>WENV180298067
OBJA01159285
243803
Alphaproteobacteria
CAT
Met
>WENV180297786
OBJA01084614
283763
Alphaproteobacteria
TGC
Ala
>WENV180298698
OBJA01543920
350547
Alphaproteobacteria
GCC
Gly
>WENV180296934
OBJA01005808
350547
Alphaproteobacteria
GCC
Gly
>WENV180298775
OBJA01600573
96994
Alphaproteobacteria
TAG
Leu
>WENV180297880
OBJA01104278
104569
Alphaproteobacteria
TAG
Leu
>WENV180298320
OBJA01274237
99872
Alphaproteobacteria
CAG
Leu
>WENV180297538
OBJA01042522
179131
Alphaproteobacteria
GAT
Ile
>WENV180296489
OBJA01000659
341164
Alphaproteobacteria
GCC
Gly
>WENV180297404
OBJA01028734
260015
Alphaproteobacteria
CTC
Glu
>WENV180297612
OBJA01051229
284043
Alphaproteobacteria
CGT
Thr
>WENV180298912
OBJA01773517
163860
Alphaproteobacteria
GGG
Pro
>WENV180297996
OBJA01134591
338760
Alphaproteobacteria
GAA
Phe
>WENV180296815
OBJA01003083
339306
Alphaproteobacteria
>WENV180298806
OBJA01630613
369678
Alphaproteobacteria
GGT
Thr
>WENV180297935
OBJA01118298
185456
Alphaproteobacteria
GTG
His
>WENV180298980
OBJA01851251
259072
Alphaproteobacteria
CGC
Ala
>WENV180297118
OBJA01010685
98812
Alphaproteobacteria
CAG
Leu
>WENV180298505
OBJA01382644
96061
Alphaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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