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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
150 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180302477
OBJF01002060
235097
Bacteroidota
TTT
Lys
>WENV180303191
OBJF01017552
141635
Bacteroidota
TAC
Val
>WENV180303452
OBJF01043117
141635
Bacteroidota
TAC
Val
>WENV180303642
OBJF01074311
235102
Bacteroidota
CGT
Thr
>WENV180302880
OBJF01006789
267954
Bacteroidota
GCC
Gly
>WENV180302919
OBJF01007621
267954
Bacteroidota
GCC
Gly
>WENV180302680
OBJF01003627
144657
Bacteroidota
CGG
Pro
>WENV180302700
OBJF01003876
144657
Bacteroidota
CGG
Pro
>WENV180302523
OBJF01002357
243025
Bacteroidota
CAT
Met
>WENV180302587
OBJF01002823
243025
Bacteroidota
CAT
Met
>WENV180303217
OBJF01020003
243025
Bacteroidota
CAT
Met
>WENV180303867
OBJF01149802
338155
Bacteroidota
CTC
Glu
>WENV180302703
OBJF01003878
338155
Bacteroidota
CTC
Glu
>WENV180303346
OBJF01031236
153993
Bacteroidota
GAT
Ile
>WENV180303005
OBJF01009640
58715
Bacteroidota
GAG
Leu
>WENV180302576
OBJF01002748
58715
Bacteroidota
GAG
Leu
>WENV180303660
OBJF01080178
46165
Bacteroidota
TGA
Ser
>WENV180302277
OBJF01001066
17323
Bacteroidota
GGA
Ser
>WENV180302106
OBJF01000537
95618
Bacteroidota
TAG
Leu
>WENV180303747
OBJF01098010
338486
Bacteroidota
CAT
Met
>WENV180303278
OBJF01025201
338486
Bacteroidota
CAT
Met
>WENV180303227
OBJF01020646
338486
Bacteroidota
CAT
Met
>WENV180302741
OBJF01004380
338486
Bacteroidota
CAT
Met
>WENV180301970
OBJF01000241
411543
Bacteroidota
CTG
Gln
>WENV180302426
OBJF01001727
59689
Bacteroidota
CAG
Leu
>WENV180302799
OBJF01005113
436206
Bacteroidota
TTG
Gln
>WENV180302657
OBJF01003416
436206
Bacteroidota
TTG
Gln
>WENV180301665
OBJF01000005
436206
Bacteroidota
TTG
Gln
>WENV180303959
OBJF01205150
20893
Bacteroidota
GGA
Ser
>WENV180302820
OBJF01005586
20893
Bacteroidota
GGA
Ser
>WENV180302757
OBJF01004552
20893
Bacteroidota
GGA
Ser
>WENV180302373
OBJF01001502
344692
Bacteroidota
GGT
Thr
>WENV180302821
OBJF01005597
145504
Bacteroidota
TGT
Thr
>WENV180302115
OBJF01000559
338124
Bacteroidota
CCG
Arg
>WENV180301863
OBJF01000116
338124
Bacteroidota
CCG
Arg
>WENV180303584
OBJF01062595
238121
Bacteroidota
CTT
Lys
>WENV180303583
OBJF01062595
238121
Bacteroidota
CTT
Lys
>WENV180303582
OBJF01062595
238121
Bacteroidota
CTT
Lys
>WENV180303581
OBJF01062595
238121
Bacteroidota
CTT
Lys
>WENV180303971
OBJF01205598
338132
Bacteroidota
GCA
Cys
>WENV180302574
OBJF01002736
338132
Bacteroidota
GCA
Cys
>WENV180302256
OBJF01000976
338132
Bacteroidota
GCA
Cys
>WENV180302220
OBJF01000826
338132
Bacteroidota
GCA
Cys
>WENV180302117
OBJF01000564
338132
Bacteroidota
GCA
Cys
>WENV180301968
OBJF01000237
338132
Bacteroidota
GCA
Cys
>WENV180301967
OBJF01000237
338132
Bacteroidota
GCA
Cys
>WENV180303954
OBJF01204928
193809
Bacteroidota
CAT
Met
>WENV180302734
OBJF01004304
58714
Bacteroidota
CAA
Leu
>WENV180303572
OBJF01060539
235165
Bacteroidota
CCA
Trp
>WENV180303348
OBJF01031416
301449
Bacteroidota
CGG
Pro
>WENV180303016
OBJF01010204
301449
Bacteroidota
CGG
Pro
>WENV180302960
OBJF01008435
301449
Bacteroidota
CGG
Pro
>WENV180302829
OBJF01005828
301449
Bacteroidota
CGG
Pro
>WENV180302779
OBJF01004771
301449
Bacteroidota
CGG
Pro
>WENV180302497
OBJF01002206
301449
Bacteroidota
CGG
Pro
>WENV180302469
OBJF01001979
301449
Bacteroidota
CGG
Pro
>WENV180303990
OBJF01210184
144933
Bacteroidota
TCT
Arg
>WENV180302096
OBJF01000510
144933
Bacteroidota
TCT
Arg
>WENV180303076
OBJF01012341
303954
Bacteroidota
GCC
Gly
>WENV180302295
OBJF01001200
144656
Bacteroidota
GTG
His
>WENV180302259
OBJF01000982
235207
Bacteroidota
CAT
Met
>WENV180302258
OBJF01000982
235207
Bacteroidota
CAT
Met
>WENV180302029
OBJF01000350
235207
Bacteroidota
CAT
Met
>WENV180301946
OBJF01000191
235207
Bacteroidota
CAT
Met
>WENV180302513
OBJF01002282
143169
Bacteroidota
GGG
Pro
>WENV180302503
OBJF01002218
143169
Bacteroidota
GGG
Pro
>WENV180302410
OBJF01001649
143169
Bacteroidota
GGG
Pro
>WENV180302025
OBJF01000337
143169
Bacteroidota
GGG
Pro
>WENV180303025
OBJF01010526
143169
Bacteroidota
GGG
Pro
>WENV180303069
OBJF01012120
144659
Bacteroidota
GTG
His
>WENV180302681
OBJF01003627
235180
Bacteroidota
CCA
Trp
>WENV180301744
OBJF01000040
144596
Bacteroidota
GGC
Ala
>WENV180303185
OBJF01017253
80607
Bacteroidota
GTA
Tyr
>WENV180303013
OBJF01010015
80607
Bacteroidota
GTA
Tyr
>WENV180302209
OBJF01000778
80607
Bacteroidota
GTA
Tyr
>WENV180302104
OBJF01000526
80607
Bacteroidota
GTA
Tyr
>WENV180302035
OBJF01000361
80607
Bacteroidota
GTA
Tyr
>WENV180302691
OBJF01003781
80614
Bacteroidota
>WENV180303080
OBJF01012525
154643
Bacteroidota
CAT
Met
>WENV180303994
OBJF01210381
144590
Bacteroidota
GTT
Asn
>WENV180303658
OBJF01079939
144590
Bacteroidota
GTT
Asn
>WENV180302755
OBJF01004512
95559
Bacteroidota
TAG
Leu
>WENV180303218
OBJF01020030
144655
Bacteroidota
GGC
Ala
>WENV180302031
OBJF01000357
144655
Bacteroidota
GGC
Ala
>WENV180303386
OBJF01035670
144639
Bacteroidota
GGC
Ala
>WENV180303015
OBJF01010042
338164
Bacteroidota
TTC
Glu
>WENV180303014
OBJF01010042
338164
Bacteroidota
TTC
Glu
>WENV180303066
OBJF01012052
95875
Bacteroidota
TAG
Leu
>WENV180302788
OBJF01004922
95875
Bacteroidota
TAG
Leu
>WENV180302508
OBJF01002251
151121
Bacteroidota
CAT
Met
>WENV180303051
OBJF01011306
139743
Bacteroidota
GGG
Pro
>WENV180303155
OBJF01015583
240012
Bacteroidota
CCC
Gly
>WENV180302088
OBJF01000485
44852
Bacteroidota
TAA
Leu
>WENV180302063
OBJF01000416
44852
Bacteroidota
TAA
Leu
>WENV180301685
OBJF01000012
44852
Bacteroidota
TAA
Leu
>WENV180302506
OBJF01002234
147439
Bacteroidota
TCT
Arg
>WENV180302812
OBJF01005497
280513
Bacteroidota
TTT
Lys
>WENV180303962
OBJF01205310
150485
Bacteroidota
GTT
Asn
>WENV180303961
OBJF01205310
150485
Bacteroidota
GTT
Asn
>WENV180303139
OBJF01014580
150485
Bacteroidota
GTT
Asn
>WENV180303028
OBJF01010586
150485
Bacteroidota
GTT
Asn
>WENV180302510
OBJF01002264
150485
Bacteroidota
GTT
Asn
>WENV180303989
OBJF01210175
338165
Bacteroidota
GGT
Thr
>WENV180303029
OBJF01010597
19528
Bacteroidota
GGA
Ser
>WENV180302646
OBJF01003315
19528
Bacteroidota
GGA
Ser
>WENV180302427
OBJF01001732
19528
Bacteroidota
GGA
Ser
>WENV180303232
OBJF01020847
50727
Bacteroidota
TGA
Ser
>WENV180303244
OBJF01021957
425638
Bacteroidota
CTG
Gln
>WENV180302770
OBJF01004635
425638
Bacteroidota
CTG
Gln
>WENV180301688
OBJF01000013
425638
Bacteroidota
CTG
Gln
>WENV180301663
OBJF01000004
425638
Bacteroidota
CTG
Gln
>WENV180302835
OBJF01006009
239647
Bacteroidota
TTT
Lys
>WENV180302204
OBJF01000751
239647
Bacteroidota
TTT
Lys
>WENV180302024
OBJF01000337
19317
Bacteroidota
GGA
Ser
>WENV180302580
OBJF01002778
94703
Bacteroidota
GTA
Tyr
>WENV180302499
OBJF01002206
94703
Bacteroidota
GTA
Tyr
>WENV180302251
OBJF01000968
94703
Bacteroidota
GTA
Tyr
>WENV180302226
OBJF01000849
94703
Bacteroidota
GTA
Tyr
>WENV180302825
OBJF01005708
353927
Bacteroidota
TTC
Glu
>WENV180302824
OBJF01005708
353927
Bacteroidota
TTC
Glu
>WENV180302697
OBJF01003808
353927
Bacteroidota
TTC
Glu
>WENV180303690
OBJF01084581
185921
Bacteroidota
GTC
Asp
>WENV180302690
OBJF01003781
185921
Bacteroidota
GTC
Asp
>WENV180302026
OBJF01000343
185921
Bacteroidota
GTC
Asp
>WENV180303351
OBJF01031964
146530
Bacteroidota
TGT
Thr
>WENV180303866
OBJF01149802
23696
Bacteroidota
GCT
Ser
>WENV180302706
OBJF01003945
414426
Bacteroidota
CTG
Gln
>WENV180302131
OBJF01000594
414426
Bacteroidota
CTG
Gln
>WENV180303228
OBJF01020764
56823
Bacteroidota
TGA
Ser
>WENV180303056
OBJF01011485
56823
Bacteroidota
TGA
Ser
>WENV180302986
OBJF01009051
56823
Bacteroidota
TGA
Ser
>WENV180302676
OBJF01003562
56823
Bacteroidota
TGA
Ser
>WENV180302603
OBJF01002904
56823
Bacteroidota
TGA
Ser
>WENV180302400
OBJF01001635
56823
Bacteroidota
TGA
Ser
>WENV180302333
OBJF01001387
56823
Bacteroidota
TGA
Ser
>WENV180302261
OBJF01001006
56823
Bacteroidota
TGA
Ser
>WENV180302247
OBJF01000946
56823
Bacteroidota
TGA
Ser
>WENV180302168
OBJF01000656
56823
Bacteroidota
TGA
Ser
>WENV180302045
OBJF01000382
56823
Bacteroidota
TGA
Ser
>WENV180301874
OBJF01000137
56823
Bacteroidota
TGA
Ser
>WENV180301813
OBJF01000088
56823
Bacteroidota
TGA
Ser
>WENV180302107
OBJF01000544
16224
Bacteroidota
GGA
Ser
>WENV180303432
OBJF01040902
151960
Bacteroidota
GGC
Ala
>WENV180302281
OBJF01001114
16220
Bacteroidota
GGA
Ser
>WENV180301966
OBJF01000235
338125
Bacteroidota
CCT
Arg
>WENV180304005
OBJF01210584
235129
Bacteroidota
GCC
Gly
>WENV180302845
OBJF01006210
235129
Bacteroidota
GCC
Gly
>WENV180302673
OBJF01003523
313363
Bacteroidota
GAA
Phe
>WENV180302896
OBJF01007231
313363
Bacteroidota
GAA
Phe
>WENV180302827
OBJF01005743
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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